Gene: Solyc08g066180.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g066180.3
  • Transcript Identifier Solyc08g066180.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 52673239-52684238 : negative

Gene Family Information

  • ID HOM05D004433
  • #Genes/#Species 162/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g066180.3.1
  • uniprot A0A3Q7HNB6
  • gene_id Solyc08g066180

Descriptions

  • Description Haloacid dehalogenase-like hydrolase family protein (AHRD V3.3 *** A0A2U1QHW6_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006508
IEA
GOA Databaseproteolysis
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT2G25870
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G25870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G25870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G25870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002036 Endoribonuclease YbeY
IPR023214 HAD superfamily
IPR036412 HAD-like superfamily
IPR000150 Cof family
IPR006379 HAD-superfamily hydrolase, subfamily IIB
IPR023091 Metalloprotease catalytic domain superfamily, predicted
Mapman id Description
16.11.1.9 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (YbeY)