Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR511G0004 Trochodendron aralioides HOM05D004852 ORTHO05D006128 2.0e-200 702.2 355 100.0
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.7e-58 230.7 121 97.5
TAR371G0276 Trochodendron aralioides HOM05D004852 ORTHO05D006128 1.0e-50 204.9 127 81.1
TAR376G0480 Trochodendron aralioides HOM05D004852 ORTHO05D006128 5.1e-42 176.0 173 56.1
GSVIVG01037905001 Vitis vinifera HOM05D004852 ORTHO05D006128 4.3e-41 172.9 91 87.9
Actinidia05501 Actinidia chinensis HOM05D004852 ORTHO05D006128 7.3e-41 172.2 91 87.9
Dinv42201 Davidia involucrata HOM05D004852 ORTHO05D006128 1.2e-40 171.4 91 87.9
Nn1g04670 Nelumbo nucifera HOM05D004852 ORTHO05D006128 1.2e-40 171.4 123 74.0
PSO541G3304 Papaver somniferum HOM05D004852 ORTHO05D006128 1.2e-40 171.4 91 87.9
Hma1.2p1_2341F.1_g320330 Hydrangea macrophylla HOM05D004852 ORTHO05D006128 2.1e-40 170.6 91 86.8
Aqoxy6G02842 Aquilegia oxysepala HOM05D004852 ORTHO05D006128 1.1e-39 168.3 91 84.6
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 1.1e-39 168.3 91 84.6
TPR.G21613 Trifolium pratense HOM05D004852 ORTHO05D006128 2.3e-39 167.2 91 83.5
Lsat_1_v5_gn_7_85781 Lactuca sativa HOM05D004852 ORTHO05D006128 5.2e-39 166.0 91 86.8
CSS0042044 Camellia sinensis var. sinensis HOM05D004852 ORTHO05D006128 6.8e-39 165.6 91 85.7
Hma1.2p1_2341F.1_g320320 Hydrangea macrophylla HOM05D004852 ORTHO05D006128 6.8e-39 165.6 168 56.0
Manes.07G069666 Manihot esculenta HOM05D004852 ORTHO05D006128 6.8e-39 165.6 91 81.3
Rhsim05G0088900 Rhododendron simsii HOM05D004852 ORTHO05D006128 6.8e-39 165.6 91 84.6
Sabra09G0072700 Salix brachista HOM05D004852 ORTHO05D006128 8.9e-39 165.2 116 71.6
MBI16_g23720_MAGBIO Magnolia biondii HOM05D004852 ORTHO05D006128 1.5e-38 164.5 91 81.3
QL11p033063 Quercus lobata HOM05D004852 ORTHO05D006128 2.6e-38 163.7 91 82.4
RcHm_v2.0_Chr6g0254741 Rosa chinensis HOM05D004852 ORTHO05D006128 2.6e-38 163.7 91 82.4
CiPaw.05G012900 Carya illinoinensis HOM05D004852 ORTHO05D006128 3.4e-38 163.3 91 81.3
Ca_24346_v3 Cicer arietinum L. HOM05D004852 ORTHO05D006128 3.4e-38 163.3 91 83.5
Potri.009G094400 Populus trichocarpa HOM05D004852 ORTHO05D006128 4.4e-38 162.9 116 70.7
Medtr5g004960 Medicago truncatula HOM05D004852 ORTHO05D006128 5.8e-38 162.5 91 81.3
Thecc.02G110100 Theobroma cacao HOM05D004852 ORTHO05D006128 7.6e-38 162.2 91 81.3
Atru.chr3.2810 Acer truncatum HOM05D004852 ORTHO05D006128 9.9e-38 161.8 120 65.8
Duzib205G0175 Durio zibethinus HOM05D004852 ORTHO05D006128 1.7e-37 161.0 91 80.2
Gohir.D13G043200 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.7e-37 161.0 91 79.1
Gorai.013G047900 Gossypium raimondii HOM05D004852 ORTHO05D006128 1.7e-37 161.0 91 79.1
Atru.chr5.2475 Acer truncatum HOM05D004852 ORTHO05D006128 2.2e-37 160.6 120 65.0
TWI79G0830 Tripterygium wilfordii HOM05D004852 ORTHO05D006128 2.2e-37 160.6 91 81.3
DCAR_029088 Daucus carota HOM05D004852 ORTHO05D006128 3.7e-37 159.8 91 82.4
FAN15G1156 Fragaria x ananassa HOM05D004852 ORTHO05D006128 3.7e-37 159.8 91 81.3
Lalb_Chr09g0319581 Lupinus albus HOM05D004852 ORTHO05D006128 3.7e-37 159.8 91 81.3
SEGI_39660 Sequoiadendron giganteum HOM05D004852 ORTHO05D006128 3.7e-37 159.8 91 80.2
EL10Ac9g22261 Beta vulgaris HOM05D004852 ORTHO05D006128 4.9e-37 159.5 120 68.3
Gohir.A13G044100 Gossypium hirsutum HOM05D004852 ORTHO05D006128 4.9e-37 159.5 91 79.1
HanXRQChr17g0570571 Helianthus annuus HOM05D004852 ORTHO05D006128 4.9e-37 159.5 116 73.3
FvH4_2g04972 Fragaria vesca HOM05D004852 ORTHO05D006128 6.4e-37 159.1 91 81.3
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea HOM05D004852 ORTHO05D006128 8.3e-37 158.7 91 81.3
Sed0001586 Sechium edule HOM05D004852 ORTHO05D006128 8.3e-37 158.7 91 80.2
Eucgr.I01096 Eucalyptus grandis HOM05D004852 ORTHO05D006128 1.9e-36 157.5 91 79.1
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea HOM05D004852 ORTHO05D006128 2.4e-36 157.1 91 80.2
COL.COLO4_32578 Corchorus olitorius HOM05D004852 ORTHO05D006128 2.4e-36 157.1 91 78.0
Psat4g228520 Pisum sativum HOM05D004852 ORTHO05D006128 2.4e-36 157.1 91 79.1
ClCG02G006490 Citrullus lanatus HOM05D004852 ORTHO05D006128 3.2e-36 156.8 91 78.0
Lj1g0003104 Lotus japonicus HOM05D004852 ORTHO05D006128 3.2e-36 156.8 91 80.2
Oeu044275.2 Olea europaea HOM05D004852 ORTHO05D006128 3.2e-36 156.8 91 79.1
Cc02_g19340 Coffea canephora HOM05D004852 ORTHO05D006128 4.1e-36 156.4 91 78.0
MELO3C005497.2 Cucumis melo HOM05D004852 ORTHO05D006128 5.4e-36 156.0 91 78.0
CANSAT25G3392 Cannabis sativa HOM05D004852 ORTHO05D006128 7.1e-36 155.6 91 81.3
MD10G1098400 Malus domestica HOM05D004852 ORTHO05D006128 7.1e-36 155.6 116 67.2
Glyma.01G243900 Glycine max HOM05D004852 ORTHO05D006128 1.2e-35 154.8 91 79.1
Lj5A215G62 Lonicera japonica HOM05D004852 ORTHO05D006128 1.2e-35 154.8 91 81.3
Nitab4.5_0001143g0010 Nicotiana tabacum HOM05D004852 ORTHO05D006128 1.2e-35 154.8 95 76.8
Phvul.002G053200 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 1.2e-35 154.8 91 80.2
CsaV3_7G008100 Cucumis sativus L. HOM05D004852 ORTHO05D006128 1.6e-35 154.5 91 76.9
SalBow3G4263 Salvia bowleyana HOM05D004852 ORTHO05D006128 1.6e-35 154.5 91 78.0
ECA236G4936 Erigeron canadensis HOM05D004852 ORTHO05D006128 2.1e-35 154.1 116 69.0
Peaxi162Scf00016g02441 Petunia axillaris HOM05D004852 ORTHO05D006128 2.1e-35 154.1 91 78.0
Sc18g0005570 Simmondsia chinensis HOM05D004852 ORTHO05D006128 2.1e-35 154.1 91 75.8
Zm00001eb226110 Zea mays HOM05D004852 ORTHO05D006128 2.1e-35 154.1 120 62.5
Solyc01g107510.3 Solanum lycopersicum HOM05D004852 ORTHO05D006128 2.7e-35 153.7 91 76.9
Sopen01g049730 Solanum pennellii HOM05D004852 ORTHO05D006128 2.7e-35 153.7 91 76.9
CAN.G606.8 Capsicum annuum HOM05D004852 ORTHO05D006128 3.5e-35 153.3 91 76.9
PGR142G1976 Punica granatum HOM05D004852 ORTHO05D006128 3.5e-35 153.3 91 76.9
AUR62039064 Chenopodium quinoa HOM05D004852 ORTHO05D006128 4.6e-35 152.9 114 66.7
SGA_v2.0_scaffold106G30732 Striga asiatica HOM05D004852 ORTHO05D006128 4.6e-35 152.9 91 76.9
ATR0205G027 Amborella trichopoda HOM05D004852 ORTHO05D006128 6.0e-35 152.5 120 61.7
Hund06310 Selenicereus undatus HOM05D004852 ORTHO05D006128 7.8e-35 152.1 120 62.5
THA.LOC104812918 Tarenaya hassleriana HOM05D004852 ORTHO05D006128 7.8e-35 152.1 91 79.1
CAN.G606.11 Capsicum annuum HOM05D004811 ORTHO05D006888 1.3e-34 151.4 91 75.8
Ah.01g018340 Amaranthus hybridus HOM05D004852 ORTHO05D006128 1.7e-34 151.0 116 66.4
Cpa.g.sc106.106 Carica papaya HOM05D004852 ORTHO05D006128 2.3e-34 150.6 97 74.2
Rhsim05G0100000 Rhododendron simsii HOM05D004852 ORTHO05D006128 3.0e-34 150.2 92 76.1
AL8G14780 Arabidopsis lyrata HOM05D004852 ORTHO05D006128 3.9e-34 149.8 91 79.1
AT5G44750 Arabidopsis thaliana HOM05D004852 ORTHO05D006128 5.1e-34 149.4 91 79.1
Carub.0008s0351 Capsella rubella HOM05D004852 ORTHO05D006128 5.1e-34 149.4 91 79.1
Nitab4.5_0004326g0020 Nicotiana tabacum HOM05D004852 ORTHO05D006128 1.5e-33 147.9 92 76.1
Os06g0691000 Oryza sativa ssp. japonica HOM05D004852 ORTHO05D006128 1.5e-33 147.9 120 60.0
HPP92_016994 Vanilla planifolia HOM05D004852 ORTHO05D006128 1.9e-33 147.5 120 60.0
HPP92_017090 Vanilla planifolia HOM05D004852 ORTHO05D006128 1.9e-33 147.5 120 60.0
Migut.N01158 Erythranthe guttata HOM05D004852 ORTHO05D006128 2.5e-33 147.1 91 74.7
HPP92_017010 Vanilla planifolia HOM05D004852 ORTHO05D006128 2.5e-33 147.1 120 60.0
Aa31LG9G8420 Aethionema arabicum HOM05D004852 ORTHO05D006128 5.6e-33 146.0 91 75.8
BcaNung06822 Brassica carinata HOM05D004852 ORTHO05D006128 2.8e-32 143.7 91 75.8
C07p27720 Brassica napus HOM05D004852 ORTHO05D006128 2.8e-32 143.7 91 75.8
Thhalv10000766m.g Eutrema salsugineum HOM05D004852 ORTHO05D006128 3.6e-32 143.3 91 76.9
A06p46930 Brassica napus HOM05D004852 ORTHO05D006128 4.7e-32 142.9 91 75.8
BolC7t43304H Brassica oleracea HOM05D004852 ORTHO05D006128 4.7e-32 142.9 91 75.8
BraA06t27566Z Brassica rapa HOM05D004852 ORTHO05D006128 4.7e-32 142.9 91 75.8
Prupe.8G136700 Prunus persica HOM05D004852 ORTHO05D006128 4.7e-32 142.9 270 37.8
Ciclev10027730m.g Citrus clementina HOM05D004852 ORTHO05D006128 1.1e-31 141.7 99 69.7
Sp2g09590 Schrenkiella parvula HOM05D004852 ORTHO05D006128 1.1e-31 141.7 91 75.8
EL10As9g23934 Beta vulgaris HOM05D004852 ORTHO05D006128 8.9e-31 138.7 114 64.9
FAN08G0567 Fragaria x ananassa HOM05D004852 ORTHO05D006128 5.8e-30 136.0 86 73.3
Pp3c22_4740 Physcomitrium patens HOM05D004852 ORTHO05D006128 1.7e-29 134.4 91 69.2
Actinidia27624 Actinidia chinensis HOM05D004852 ORTHO05D006128 1.9e-28 131.0 86 73.3
AUR62010324 Chenopodium quinoa HOM05D004852 ORTHO05D006128 5.4e-28 129.4 113 60.2
BcaNung07102 Brassica carinata HOM05D004852 ORTHO05D006128 7.1e-28 129.0 117 59.0
Mapoly0216s0004 Marchantia polymorpha HOM05D004852 ORTHO05D006128 2.1e-27 127.5 109 57.8
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis HOM05D004852 ORTHO05D006128 1.0e-26 125.2 112 54.5
unitig_26.g10234 Utricularia gibba HOM05D004852 ORTHO05D006128 2.8e-24 117.1 148 47.3
SMO235G0070 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 9.0e-23 112.1 87 60.9
FAN17G1969 Fragaria x ananassa HOM05D004852 ORTHO05D006128 2.2e-21 107.5 69 71.0
Cre12.g550800 Chlamydomonas reinhardtii HOM05D004852 ORTHO05D006128 2.7e-19 100.5 126 38.9
PRCOL_00001737 Prasinoderma coloniale HOM05D004852 ORTHO05D006128 5.8e-14 82.8 84 47.6
VMungo1309G1067 Vigna mungo HOM05D004852 ORTHO05D006128 2.2e-13 80.9 46 80.4
MCO11G654 Micromonas commoda HOM05D004852 ORTHO05D006128 4.9e-13 79.7 112 42.0
RcHm_v2.0_Chr1g0332621 Rosa chinensis HOM05D004852 ORTHO05D006128 2.4e-12 77.4 47 74.5
RcHm_v2.0_Chr4g0432031 Rosa chinensis HOM05D004852 ORTHO05D006128 2.4e-12 77.4 46 76.1
RcHm_v2.0_Chr2g0113681 Rosa chinensis HOM05D004852 ORTHO05D006128 3.0e-10 70.5 39 79.5
EL10Ac4g08553 Beta vulgaris HOM05D004852 ORTHO05D006128 5.1e-10 69.7 68 58.8
Cfa025442 Carpinus fangiana HOM05D004852 ORTHO05D006128 5.6e-09 66.2 80 42.5
MELO3C018521.2 Cucumis melo HOM05D002857 ORTHO05D007919 3.4e-06 57.0 88 36.4
CsaV3_7G007810 Cucumis sativus L. HOM05D002857 ORTHO05D007919 7.6e-06 55.8 88 35.2


User provided reference genes

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