Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1393 Trochodendron aralioides HOM05D000725 ORTHO05D003141 1.4e-251 872.5 429 100.0
TAR625G0592 Trochodendron aralioides HOM05D000725 ORTHO05D003141 2.5e-136 489.6 518 55.4
Aqoxy5G01538 Aquilegia oxysepala HOM05D000725 ORTHO05D003141 3.2e-59 233.4 509 34.4
Dinv42034 Davidia involucrata HOM05D000725 ORTHO05D003141 1.6e-50 204.5 423 35.9
GSVIVG01024225001 Vitis vinifera HOM05D000725 ORTHO05D003141 2.7e-50 203.8 438 34.7
CiPaw.06G132300 Carya illinoinensis HOM05D000725 ORTHO05D003141 3.0e-49 200.3 405 36.0
QL11p045293 Quercus lobata HOM05D000725 ORTHO05D003141 3.9e-49 199.9 430 33.7
Dinv23485 Davidia involucrata HOM05D000725 ORTHO05D003141 1.1e-48 198.4 434 35.0
CiPaw.05G070200 Carya illinoinensis HOM05D000725 ORTHO05D003141 1.5e-48 198.0 409 35.2
Haze_02322 Corylus avellana HOM05D000725 ORTHO05D003141 9.7e-48 195.3 424 34.9
GSVIVG01024512001 Vitis vinifera HOM05D000725 ORTHO05D003141 8.2e-47 192.2 397 35.5
MELO3C023332.2 Cucumis melo HOM05D000725 ORTHO05D003141 1.2e-45 188.3 418 34.2
Prupe.8G090000 Prunus persica HOM05D000725 ORTHO05D003141 1.6e-45 188.0 384 36.7
Sed0003616 Sechium edule HOM05D000725 ORTHO05D003141 2.6e-45 187.2 413 33.4
Rhsim05G0070700 Rhododendron simsii HOM05D000725 ORTHO05D003141 3.6e-42 176.8 435 32.2
FAN24G2419 Fragaria x ananassa HOM05D000725 ORTHO05D003141 6.1e-42 176.0 411 32.1
Sed0009304 Sechium edule HOM05D000725 ORTHO05D003141 8.0e-42 175.6 439 31.9
ClCG11G004110 Citrullus lanatus HOM05D000725 ORTHO05D003141 1.4e-41 174.9 430 32.6
CsaV3_2G015070 Cucumis sativus L. HOM05D000725 ORTHO05D003141 2.3e-41 174.1 414 33.3
FAN27G2965 Fragaria x ananassa HOM05D000725 ORTHO05D003141 2.3e-41 174.1 415 32.5
MD10G1068100 Malus domestica HOM05D000725 ORTHO05D003141 1.2e-40 171.8 408 33.1
FAN15G1535 Fragaria x ananassa HOM05D000725 ORTHO05D003141 4.4e-40 169.9 446 30.9
FvH4_2g09760 Fragaria vesca HOM05D000725 ORTHO05D003141 1.3e-39 168.3 413 32.0
Actinidia02233 Actinidia chinensis HOM05D000725 ORTHO05D003141 2.8e-39 167.2 403 34.2
Aqoxy5G01532 Aquilegia oxysepala HOM05D000725 ORTHO05D003141 3.7e-39 166.8 548 28.1
MBI11_g32386_MAGBIO Magnolia biondii HOM05D000725 ORTHO05D003141 8.3e-39 165.6 583 29.7
RcHm_v2.0_Chr6g0266061 Rosa chinensis HOM05D000725 ORTHO05D003141 8.3e-39 165.6 404 33.2
vmacro17455 Vaccinium macrocarpon HOM05D000725 ORTHO05D003141 1.4e-38 164.9 440 32.0
Ciclev10027795m.g Citrus clementina HOM05D000725 ORTHO05D003141 2.4e-38 164.1 364 33.5
arahy.Tifrunner.gnm1.ann1.XRRC6E Arachis hypogaea HOM05D000725 ORTHO05D003141 2.7e-37 160.6 414 33.6
Glyma.12G236100 Glycine max HOM05D000725 ORTHO05D003141 4.5e-37 159.8 371 33.4
CANSAT11G1287 Cannabis sativa HOM05D000725 ORTHO05D003141 5.9e-37 159.5 380 32.4
EL10Ac9g21686 Beta vulgaris HOM05D000725 ORTHO05D003141 1.5e-35 154.8 405 30.4
arahy.Tifrunner.gnm1.ann1.S1J40P Arachis hypogaea HOM05D000725 ORTHO05D003141 5.5e-35 152.9 414 32.6
PSO731G0040 Papaver somniferum HOM05D000725 ORTHO05D003141 5.5e-35 152.9 442 27.1
Lalb_Chr19g0132271 Lupinus albus HOM05D000725 ORTHO05D003141 9.4e-35 152.1 393 31.3
TWI75G0750 Tripterygium wilfordii HOM05D000725 ORTHO05D003141 1.2e-34 151.8 400 31.8
Atru.chr5.3086 Acer truncatum HOM05D000725 ORTHO05D003141 2.1e-34 151.0 412 32.0
Thecc.02G079900 Theobroma cacao HOM05D000725 ORTHO05D003141 2.1e-34 151.0 405 30.4
Lj5g0003943 Lotus japonicus HOM05D000725 ORTHO05D003141 3.6e-34 150.2 404 29.2
Sopen01g052160 Solanum pennellii HOM05D000725 ORTHO05D003141 3.6e-34 150.2 432 31.5
Manes.11G082500 Manihot esculenta HOM05D000725 ORTHO05D003141 6.1e-34 149.4 415 31.8
Lj6g0007539 Lotus japonicus HOM05D000725 ORTHO05D003141 1.0e-33 148.7 404 29.2
MSTRG.16829 Avicennia marina HOM05D000725 ORTHO05D003141 1.4e-33 148.3 455 29.7
Gohir.D12G030100 Gossypium hirsutum HOM05D000725 ORTHO05D003141 1.4e-33 148.3 414 31.4
CAN.G1544.11 Capsicum annuum HOM05D000725 ORTHO05D003141 1.8e-33 147.9 422 28.4
Lj1g0015165 Lotus japonicus HOM05D000725 ORTHO05D003141 1.8e-33 147.9 409 29.3
PSO700G0205 Papaver somniferum HOM05D000725 ORTHO05D003141 1.8e-33 147.9 443 27.8
Lj5g0015696 Lotus japonicus HOM05D000725 ORTHO05D003141 3.0e-33 147.1 410 28.5
Gorai.008G031000 Gossypium raimondii HOM05D000725 ORTHO05D003141 4.0e-33 146.7 417 32.1
Oeu041616.1 Olea europaea HOM05D000725 ORTHO05D003141 4.0e-33 146.7 436 28.2
Cc02_g17200 Coffea canephora HOM05D000725 ORTHO05D003141 1.2e-32 145.2 410 29.0
Gohir.A12G042200 Gossypium hirsutum HOM05D000725 ORTHO05D003141 1.2e-32 145.2 413 31.2
Lj5A193T102 Lonicera japonica HOM05D000725 ORTHO05D003141 1.5e-32 144.8 418 29.7
Peaxi162Scf00016g00426 Petunia axillaris HOM05D000725 ORTHO05D003141 1.3e-31 141.7 402 33.8
VMungo1127G0892 Vigna mungo HOM05D000725 ORTHO05D003141 1.7e-31 141.4 392 29.3
Migut.B00205 Erythranthe guttata HOM05D000725 ORTHO05D003141 2.2e-31 141.0 385 30.9
Solyc01g109970.3 Solanum lycopersicum HOM05D000725 ORTHO05D003141 2.2e-31 141.0 429 31.9
Manes.04G086500 Manihot esculenta HOM05D000725 ORTHO05D003141 2.8e-31 140.6 402 30.1
PGSC0003DMG400030952 Solanum tuberosum HOM05D000725 ORTHO05D003141 2.8e-31 140.6 432 31.7
Lj5g0009315 Lotus japonicus HOM05D000725 ORTHO05D003141 6.3e-31 139.4 403 28.5
Nitab4.5_0003234g0070 Nicotiana tabacum HOM05D000725 ORTHO05D003141 1.1e-30 138.7 432 29.6
Nitab4.5_0012853g0020 Nicotiana tabacum HOM05D000725 ORTHO05D003141 1.4e-30 138.3 440 29.5
TWI79G0585 Tripterygium wilfordii HOM05D000725 ORTHO05D003141 2.4e-30 137.5 375 29.9
Eucgr.G01701 Eucalyptus grandis HOM05D000725 ORTHO05D003141 3.1e-30 137.1 397 28.0
Lalb_Chr01g0008001 Lupinus albus HOM05D000725 ORTHO05D003141 4.1e-30 136.7 443 29.1
Medtr8g037345 Medicago truncatula HOM05D000725 ORTHO05D003141 9.1e-30 135.6 389 31.4
RcHm_v2.0_Chr1g0330471 Rosa chinensis HOM05D000725 ORTHO05D003141 9.1e-30 135.6 356 31.7
Ca_23901_v3 Cicer arietinum L. HOM05D000725 ORTHO05D003141 1.2e-29 135.2 388 29.4
Actinidia27877 Actinidia chinensis HOM05D000725 ORTHO05D003141 1.6e-29 134.8 377 31.3
PGR042G3366 Punica granatum HOM05D000725 ORTHO05D003141 1.6e-29 134.8 365 31.5
Sc14g0002030 Simmondsia chinensis HOM05D000725 ORTHO05D003141 1.6e-29 134.8 334 32.9
Phvul.011G210600 Phaseolus vulgaris HOM05D000725 ORTHO05D003141 2.7e-29 134.0 374 31.3
PSO832G3117 Papaver somniferum HOM05D000725 ORTHO05D003141 3.5e-29 133.7 497 26.2
vmacro02076 Vaccinium macrocarpon HOM05D000725 ORTHO05D003141 7.7e-29 132.5 370 28.9
COL.COLO4_25995 Corchorus olitorius HOM05D000725 ORTHO05D003141 2.9e-28 130.6 343 30.3
PSO782G2318 Papaver somniferum HOM05D000725 ORTHO05D003141 2.9e-28 130.6 389 31.1
PGR042G0782 Punica granatum HOM05D000725 ORTHO05D003141 2.9e-28 130.6 366 30.9
TPR.G1890 Trifolium pratense HOM05D000725 ORTHO05D003141 2.9e-28 130.6 378 29.9
PSO210G6882 Papaver somniferum HOM05D000725 ORTHO05D003141 1.5e-27 128.3 498 25.9
Lj3g0000422 Lotus japonicus HOM05D000725 ORTHO05D003141 1.2e-26 125.2 363 28.9
Potri.009G120700 Populus trichocarpa HOM05D000725 ORTHO05D003141 2.8e-26 124.0 325 32.3
Rhsim11G0180800 Rhododendron simsii HOM05D000725 ORTHO05D003141 2.8e-26 124.0 385 29.9
Ah.01g019080 Amaranthus hybridus HOM05D000725 ORTHO05D003141 8.0e-26 122.5 373 29.8
Cpa.g.sc1026.2 Carica papaya HOM05D000725 ORTHO05D003141 8.0e-26 122.5 419 27.7
Gohir.A13G032200 Gossypium hirsutum HOM05D000725 ORTHO05D003141 8.0e-26 122.5 474 28.5
Psat7g126840 Pisum sativum HOM05D000725 ORTHO05D003141 3.0e-25 120.6 403 28.5
SHI05568 Sapria himalayana HOM05D000725 ORTHO05D003141 2.0e-24 117.9 404 28.0
THA.LOC104819623 Tarenaya hassleriana HOM05D000725 ORTHO05D003141 2.0e-24 117.9 444 29.5
AL3G52550 Arabidopsis lyrata HOM05D000725 ORTHO05D003141 5.7e-24 116.3 387 27.9
BcaB08g34646 Brassica carinata HOM05D000725 ORTHO05D003141 1.7e-23 114.8 368 27.4
Psat4g193880 Pisum sativum HOM05D000725 ORTHO05D003141 4.9e-23 113.2 400 27.5
QL11p045326 Quercus lobata HOM05D000725 ORTHO05D003141 4.9e-23 113.2 206 36.4
Lj6g0012773 Lotus japonicus HOM05D000725 ORTHO05D003141 6.3e-23 112.8 385 29.9
AUR62011280 Chenopodium quinoa HOM05D000725 ORTHO05D003141 8.3e-23 112.5 311 29.3
PSO063G2790 Papaver somniferum HOM05D000725 ORTHO05D003141 1.4e-22 111.7 108 52.8
Gorai.013G034700 Gossypium raimondii HOM05D000725 ORTHO05D003141 5.4e-22 109.8 467 27.8
Gohir.D13G030500 Gossypium hirsutum HOM05D000725 ORTHO05D003141 1.6e-21 108.2 455 27.5
CSS0026816 Camellia sinensis var. sinensis HOM05D000725 ORTHO05D003141 2.7e-21 107.5 306 29.7
Sp3g29660 Schrenkiella parvula HOM05D000725 ORTHO05D003141 2.7e-21 107.5 396 26.3
AT2G16390 Arabidopsis thaliana HOM05D000725 ORTHO05D003141 5.9e-21 106.3 380 27.1
AUR62016777 Chenopodium quinoa HOM05D000725 ORTHO05D003141 1.3e-20 105.1 289 33.6
A03p45780 Brassica napus HOM05D000394 ORTHO05D003141 1.7e-20 104.8 394 28.4
CDE06G1623 Ceratophyllum demersum HOM05D000725 ORTHO05D003141 1.7e-20 104.8 116 45.7
VMungo1127G1148 Vigna mungo HOM05D000725 ORTHO05D003141 1.7e-20 104.8 438 26.7
BcaC01g03023 Brassica carinata HOM05D000394 ORTHO05D003141 2.3e-20 104.4 410 27.3
C03p57010 Brassica napus HOM05D000394 ORTHO05D003141 2.3e-20 104.4 410 27.3
BolC3t17979H Brassica oleracea HOM05D000394 ORTHO05D003141 2.3e-20 104.4 410 27.3
BraA03t13708Z Brassica rapa HOM05D000394 ORTHO05D003141 2.3e-20 104.4 394 28.2
CSS0026935 Camellia sinensis var. sinensis HOM05D000725 ORTHO05D003141 2.9e-20 104.0 114 48.2
Glyma.13G201800 Glycine max HOM05D000725 ORTHO05D003141 2.9e-20 104.0 470 26.2
QL11p045305 Quercus lobata HOM05D000725 ORTHO05D003141 5.0e-20 103.2 109 50.5
ATR0665G425 Amborella trichopoda HOM05D000725 ORTHO05D003141 6.6e-20 102.8 381 27.8
HanXRQChr03g0069371 Helianthus annuus HOM05D000725 ORTHO05D003141 1.1e-19 102.1 414 26.3
ECA240G2411 Erigeron canadensis HOM05D000725 ORTHO05D003141 4.3e-19 100.1 391 25.6
Duzib248G0474 Durio zibethinus HOM05D000725 ORTHO05D003141 2.1e-18 97.8 104 49.0
Medtr2g437480 Medicago truncatula HOM05D000725 ORTHO05D003141 4.7e-18 96.7 111 47.7
Carub.0003s3016 Capsella rubella HOM05D000725 ORTHO05D003141 1.0e-17 95.5 446 25.1
DCAR_028963 Daucus carota HOM05D000725 ORTHO05D003141 1.0e-17 95.5 300 27.0
TPR.G23932 Trifolium pratense HOM05D000725 ORTHO05D003141 1.0e-17 95.5 111 48.6
Lsat_1_v5_gn_5_120421 Lactuca sativa HOM05D000725 ORTHO05D003141 1.4e-17 95.1 406 25.9
Phvul.011G210800 Phaseolus vulgaris HOM05D000725 ORTHO05D003141 3.1e-17 94.0 164 37.8
DCAR_003655 Daucus carota HOM05D000725 ORTHO05D003141 4.0e-17 93.6 113 43.4
Aa31LG8G13750 Aethionema arabicum HOM05D000725 ORTHO05D003141 5.2e-17 93.2 422 25.1
Hund06249 Selenicereus undatus HOM05D000725 ORTHO05D003141 5.2e-17 93.2 113 46.9
Thhalv10022532m.g Eutrema salsugineum HOM05D000725 ORTHO05D003141 2.0e-16 91.3 430 23.7
RcHm_v2.0_Chr6g0266081 Rosa chinensis HOM05D000725 ORTHO05D003141 3.4e-16 90.5 123 40.7
Potri.004G159000 Populus trichocarpa HOM05D000725 ORTHO05D003141 4.4e-16 90.1 89 55.1
HanXRQChr03g0069421 Helianthus annuus HOM05D000725 ORTHO05D003141 1.3e-15 88.6 115 40.0
DCAR_001556 Daucus carota HOM05D000725 ORTHO05D003141 1.7e-15 88.2 124 36.3
Actinidia11757 Actinidia chinensis HOM05D000725 ORTHO05D003141 1.9e-14 84.7 177 33.9
Prupe.8G089900 Prunus persica HOM05D000725 ORTHO05D003141 1.9e-14 84.7 152 34.2
CARHR106640 Cardamine hirsuta HOM05D000725 ORTHO05D003141 2.4e-14 84.3 380 23.7
ECA234G1026 Erigeron canadensis HOM05D000725 ORTHO05D003141 2.4e-14 84.3 387 26.1
Cc00_g19470 Coffea canephora HOM05D000725 ORTHO05D003141 3.2e-14 84.0 122 36.9
CDE03G0261 Ceratophyllum demersum HOM05D000725 ORTHO05D003141 5.4e-14 83.2 50 72.0
Ah.01g009440 Amaranthus hybridus HOM05D000725 ORTHO05D003141 7.0e-14 82.8 111 35.1
Haze_02328 Corylus avellana HOM05D000725 ORTHO05D003141 7.0e-14 82.8 162 35.2
SGA_v2.0_scaffold58G20498 Striga asiatica HOM05D000725 ORTHO05D003141 7.0e-14 82.8 134 36.6
Os03g0165266 Oryza sativa ssp. japonica HOM05D000725 ORTHO05D003141 2.7e-13 80.9 238 29.0
Hund06399 Selenicereus undatus HOM05D000725 ORTHO05D003141 1.3e-12 78.6 111 36.9
CANSAT11G1508 Cannabis sativa HOM05D000725 ORTHO05D003141 1.7e-12 78.2 98 44.9
AUR62013100 Chenopodium quinoa HOM05D000725 ORTHO05D003141 1.9e-11 74.7 210 24.3
HanXRQChr12g0374341 Helianthus annuus HOM05D000725 ORTHO05D003141 2.5e-11 74.3 106 33.0
GSVIVG01023832001 Vitis vinifera HOM05D000725 ORTHO05D003141 4.3e-11 73.6 115 32.2
AL4G10630 Arabidopsis lyrata HOM05D000725 ORTHO05D003141 1.6e-10 71.6 173 29.5
AT2G21450 Arabidopsis thaliana HOM05D000725 ORTHO05D003141 2.1e-10 71.2 171 26.9
EL10Ac9g21454 Beta vulgaris HOM05D000725 ORTHO05D003141 2.1e-10 71.2 103 32.0
AUR62010106 Chenopodium quinoa HOM05D000725 ORTHO05D003141 2.1e-10 71.2 109 30.3
Lj7A123T30 Lonicera japonica HOM05D000725 ORTHO05D003141 2.8e-10 70.9 56 58.9
COL.COLO4_25997 Corchorus olitorius HOM05D000725 ORTHO05D003141 3.6e-10 70.5 56 53.6
Cc00_g19460 Coffea canephora HOM05D000725 ORTHO05D153093 4.7e-10 70.1 175 32.0
Actinidia00556 Actinidia chinensis HOM05D000725 ORTHO05D003141 8.1e-10 69.3 130 37.7
COL.COLO4_15200 Corchorus olitorius HOM05D000725 ORTHO05D003141 1.1e-09 68.9 170 32.4
Sp4g15610 Schrenkiella parvula HOM05D000725 ORTHO05D003141 1.1e-09 68.9 327 23.9
Carub.0004s0050 Capsella rubella HOM05D000725 ORTHO05D003141 2.3e-09 67.8 120 33.3
Rhsim04G0037100 Rhododendron simsii HOM05D000725 ORTHO05D003141 2.3e-09 67.8 379 23.7
vmacro17926 Vaccinium macrocarpon HOM05D000045 ORTHO05D016003 2.3e-09 67.8 124 33.1
Sabra04G0106400 Salix brachista HOM05D000725 ORTHO05D003141 4.0e-09 67.0 101 39.6
Os06g0255700 Oryza sativa ssp. japonica HOM05D000725 ORTHO05D003141 6.8e-09 66.2 103 38.8
Os08g0289400 Oryza sativa ssp. japonica HOM05D000725 ORTHO05D003141 6.8e-09 66.2 103 38.8
Lsat_1_v5_gn_9_107821 Lactuca sativa HOM05D000725 ORTHO05D003141 8.9e-09 65.9 421 22.8
unitig_21.g20794 Utricularia gibba HOM05D000725 ORTHO05D003141 8.9e-09 65.9 145 31.7
unitig_21.g20795 Utricularia gibba HOM05D000725 ORTHO05D003141 8.9e-09 65.9 112 33.9
Os07g0434500 Oryza sativa ssp. japonica HOM05D000725 ORTHO05D003141 1.2e-08 65.5 103 38.8
Aa31LG7G15070 Aethionema arabicum HOM05D000725 ORTHO05D003141 1.5e-08 65.1 110 34.5
Lj7P123T25 Lonicera japonica HOM05D000725 ORTHO05D003141 1.5e-08 65.1 109 38.5
Zm00001eb416780 Zea mays HOM05D000725 ORTHO05D003141 2.6e-08 64.3 123 33.3
A04p25600 Brassica napus HOM05D000725 ORTHO05D003141 9.8e-08 62.4 105 30.5
BraA04t18064Z Brassica rapa HOM05D000725 ORTHO05D003141 9.8e-08 62.4 105 30.5
BolC4t27758H Brassica oleracea HOM05D000725 ORTHO05D003141 1.3e-07 62.0 114 34.2
Thhalv10000722m.g Eutrema salsugineum HOM05D000725 ORTHO05D003141 1.7e-07 61.6 105 33.3
BcaB06g28665 Brassica carinata HOM05D000725 ORTHO05D003141 2.2e-07 61.2 104 29.8
THA.LOC104807870 Tarenaya hassleriana HOM05D000725 ORTHO05D003141 2.2e-07 61.2 64 42.2
C04p62740 Brassica napus HOM05D000725 ORTHO05D003141 2.9e-07 60.8 113 34.5
BcaC02g07841 Brassica carinata HOM05D000725 ORTHO05D003141 3.7e-07 60.5 113 34.5
CARHR112360 Cardamine hirsuta HOM05D000725 ORTHO05D003141 3.7e-07 60.5 51 47.1
Zm00001eb173050 Zea mays HOM05D000725 ORTHO05D003141 4.9e-07 60.1 120 33.3
ECA234G2709 Erigeron canadensis HOM05D000725 ORTHO05D003141 1.4e-06 58.5 54 42.6
CAN.G9.13 Capsicum annuum HOM05D000725 ORTHO05D003141 2.4e-06 57.8 38 60.5
BraA03t12293Z Brassica rapa HOM05D000725 ORTHO05D003141 3.2e-06 57.4 86 36.0
A02p25850 Brassica napus HOM05D000725 ORTHO05D003141 4.1e-06 57.0 86 36.0


User provided reference genes

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