Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G1264 Trochodendron aralioides HOM05D000283 ORTHO05D005391 9.8e-155 550.1 271 100.0
TAR636G1569 Trochodendron aralioides HOM05D000283 ORTHO05D005391 5.4e-129 464.5 261 89.7
TAR633G1628 Trochodendron aralioides HOM05D000283 ORTHO05D005391 8.7e-119 430.6 261 83.1
Dinv31389 Davidia involucrata HOM05D000283 ORTHO05D005391 2.1e-88 329.7 261 66.7
Nn2g10554 Nelumbo nucifera HOM05D000283 ORTHO05D005391 6.1e-88 328.2 261 64.4
Thecc.10G063000 Theobroma cacao HOM05D000283 ORTHO05D005391 2.3e-87 326.2 261 64.0
Duzib106G1632 Durio zibethinus HOM05D000283 ORTHO05D005391 1.3e-85 320.5 261 62.1
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 2.9e-82 309.3 261 64.0
Atru.chr12.592 Acer truncatum HOM05D000283 ORTHO05D005391 1.9e-81 306.6 265 60.8
Aqoxy5G01311 Aquilegia oxysepala HOM05D000283 ORTHO05D005391 6.1e-80 301.6 263 60.8
Cpa.g.sc1.303 Carica papaya HOM05D000283 ORTHO05D005391 7.4e-78 294.7 262 61.1
Duzib128G1699 Durio zibethinus HOM05D000283 ORTHO05D005391 4.8e-77 292.0 264 59.1
CiPaw.02G178600 Carya illinoinensis HOM05D000283 ORTHO05D005391 5.0e-74 282.0 316 50.9
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 8.5e-74 281.2 303 52.1
Gohir.D10G217200 Gossypium hirsutum HOM05D000283 ORTHO05D005391 2.1e-72 276.6 264 58.0
COL.COLO4_05804 Corchorus olitorius HOM05D000283 ORTHO05D005391 3.6e-72 275.8 264 56.1
Gorai.011G242800 Gossypium raimondii HOM05D000283 ORTHO05D005391 8.0e-72 274.6 264 57.6
Gohir.A10G208900 Gossypium hirsutum HOM05D000283 ORTHO05D005391 6.7e-71 271.6 264 57.2
Sed0023338 Sechium edule HOM05D000283 ORTHO05D005391 4.4e-70 268.9 253 55.7
CsaV3_5G006520 Cucumis sativus L. HOM05D000283 ORTHO05D005391 5.7e-70 268.5 261 55.9
Haze_16972 Corylus avellana HOM05D000283 ORTHO05D005391 9.7e-70 267.7 299 50.8
PSO339G6458 Papaver somniferum HOM05D000283 ORTHO05D005391 1.7e-69 266.9 263 54.8
GSVIVG01032627001 Vitis vinifera HOM05D000283 ORTHO05D005391 1.7e-69 266.9 246 61.0
MELO3C023808.2 Cucumis melo HOM05D000283 ORTHO05D005391 3.7e-69 265.8 261 55.6
TWI15G0630 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 1.2e-67 260.8 261 55.9
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 1.3e-66 257.3 267 52.1
CiPaw.01G279700 Carya illinoinensis HOM05D000283 ORTHO05D005391 2.2e-66 256.5 283 51.9
TWI38G2098 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 5.0e-66 255.4 260 55.4
Hma1.2p1_0207F.1_g087980 Hydrangea macrophylla HOM05D000283 ORTHO05D005391 1.2e-64 250.8 262 54.6
Sabra08G0033800 Salix brachista HOM05D000283 ORTHO05D005391 1.6e-64 250.4 317 47.9
Manes.07G106300 Manihot esculenta HOM05D000283 ORTHO05D005391 2.1e-64 250.0 297 49.8
Sopen05g033370 Solanum pennellii HOM05D000283 ORTHO05D005391 1.4e-63 247.3 262 53.1
RcHm_v2.0_Chr1g0365011 Rosa chinensis HOM05D000283 ORTHO05D005391 1.8e-63 246.9 262 52.3
Ciclev10030610m.g Citrus clementina HOM05D000283 ORTHO05D005391 2.3e-63 246.5 260 52.3
QL08p057534 Quercus lobata HOM05D000283 ORTHO05D005391 4.0e-63 245.7 350 43.7
ClCG02G013670 Citrullus lanatus HOM05D000283 ORTHO05D005391 1.5e-62 243.8 260 52.3
THA.LOC104809997 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 1.5e-62 243.8 271 48.7
CSS0009141 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 2.0e-62 243.4 254 55.9
MD07G1184700 Malus domestica HOM05D000283 ORTHO05D005391 2.0e-62 243.4 266 50.4
Sed0010822 Sechium edule HOM05D000283 ORTHO05D005391 2.6e-62 243.0 218 59.6
Manes.10G039400 Manihot esculenta HOM05D000283 ORTHO05D005391 3.4e-62 242.7 263 52.1
THA.LOC104824248 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 9.8e-62 241.1 271 48.3
Glyma.20G242100 Glycine max HOM05D000283 ORTHO05D005391 1.3e-61 240.7 259 51.7
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 1.4e-60 237.3 259 51.0
MD01G1117300 Malus domestica HOM05D000283 ORTHO05D005391 3.1e-60 236.1 266 50.0
CAN.G10752.1 Capsicum annuum HOM05D000283 ORTHO05D005391 9.1e-60 234.6 261 53.3
VMungo0720G2546 Vigna mungo HOM05D000283 ORTHO05D005391 5.9e-59 231.9 259 49.8
Prupe.2G224600 Prunus persica HOM05D000283 ORTHO05D005391 1.3e-58 230.7 263 49.4
TPR.G10417 Trifolium pratense HOM05D000283 ORTHO05D005391 1.7e-58 230.3 259 49.4
Potri.008G047700 Populus trichocarpa HOM05D000283 ORTHO05D005391 3.8e-58 229.2 299 48.2
Glyma.10G292300 Glycine max HOM05D000283 ORTHO05D005391 6.6e-58 228.4 257 50.6
Lj5g0022773 Lotus japonicus HOM05D000283 ORTHO05D005391 2.5e-57 226.5 258 51.2
FAN06G1635 Fragaria x ananassa HOM05D000283 ORTHO05D005391 4.7e-56 222.2 265 47.5
FvH4_7g20770 Fragaria vesca HOM05D000283 ORTHO05D005391 6.1e-56 221.9 265 47.5
FAN06G4940 Fragaria x ananassa HOM05D000283 ORTHO05D005391 6.1e-56 221.9 265 47.2
MBI05_g22074_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 1.0e-55 221.1 263 52.5
PSO384G3825 Papaver somniferum HOM05D000283 ORTHO05D005391 2.6e-54 216.5 263 48.3
ATR0681G328 Amborella trichopoda HOM05D000283 ORTHO05D005391 3.4e-54 216.1 270 47.8
Nitab4.5_0000914g0100 Nicotiana tabacum HOM05D000283 ORTHO05D005391 3.4e-54 216.1 286 46.5
Nitab4.5_0010706g0030 Nicotiana tabacum HOM05D000283 ORTHO05D005391 1.3e-53 214.2 308 43.8
AL4G36680 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 2.8e-53 213.0 273 44.7
Lj8C92G16 Lonicera japonica HOM05D000283 ORTHO05D005391 3.7e-53 212.6 273 49.1
arahy.Tifrunner.gnm1.ann1.79HMAA Arachis hypogaea HOM05D000283 ORTHO05D005391 4.1e-52 209.1 259 47.1
arahy.Tifrunner.gnm1.ann1.M4B7ES Arachis hypogaea HOM05D000283 ORTHO05D005391 4.1e-52 209.1 259 47.1
Thhalv10016180m.g Eutrema salsugineum HOM05D000283 ORTHO05D005391 1.2e-51 207.6 272 45.2
AT2G39340 Arabidopsis thaliana HOM05D000283 ORTHO05D005391 1.6e-51 207.2 275 44.7
Cc02_g08650 Coffea canephora HOM05D000283 ORTHO05D005391 1.6e-51 207.2 262 50.8
CANSAT56G0145 Cannabis sativa HOM05D000283 ORTHO05D005391 6.6e-50 201.8 273 44.3
Sp4g21650 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.6e-50 201.8 270 44.4
SpUn0018_0020 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.6e-50 201.8 270 44.4
Medtr3g073080 Medicago truncatula HOM05D000283 ORTHO05D005391 5.6e-49 198.7 260 46.5
Oeu050639.2 Olea europaea HOM05D000283 ORTHO05D005391 5.6e-49 198.7 275 48.0
Aa31LG5G20290 Aethionema arabicum HOM05D000283 ORTHO05D005391 2.0e-46 190.3 272 42.6
CDE09G1073 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 1.3e-45 187.6 201 56.7
HanXRQChr15g0496771 Helianthus annuus HOM05D000283 ORTHO05D005391 1.3e-45 187.6 244 48.0
BcaC02g12050 Brassica carinata HOM05D000283 ORTHO05D005391 8.3e-45 184.9 265 43.8
C04p08450 Brassica napus HOM05D000283 ORTHO05D005391 8.3e-45 184.9 265 43.8
Sabra10G0165400 Salix brachista HOM05D000283 ORTHO05D005391 1.1e-44 184.5 282 44.0
AUR62042665 Chenopodium quinoa HOM05D000283 ORTHO05D005391 1.4e-44 184.1 262 43.1
Solyc05g054910.3 Solanum lycopersicum HOM05D000283 ORTHO05D005391 2.7e-43 179.9 262 43.5
CARHR134130 Cardamine hirsuta HOM05D000283 ORTHO05D005391 3.5e-43 179.5 274 40.5
Peaxi162Scf00015g02711 Petunia axillaris HOM05D000283 ORTHO05D005391 6.0e-43 178.7 259 44.4
Sc20g0002350 Simmondsia chinensis HOM05D000283 ORTHO05D005391 2.5e-41 173.3 240 43.8
Lalb_Chr21g0307161 Lupinus albus HOM05D000283 ORTHO05D005391 1.2e-40 171.0 268 41.4
PGR142G1216 Punica granatum HOM05D000283 ORTHO05D005391 3.6e-40 169.5 277 39.7
PSO339G3701 Papaver somniferum HOM05D000283 ORTHO05D005391 3.1e-39 166.4 270 41.9
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 6.8e-39 165.2 332 38.9
BolC4t28220H Brassica oleracea HOM05D000283 ORTHO05D005391 8.9e-39 164.9 271 41.7
unitig_749.g14014 Utricularia gibba HOM05D000283 ORTHO05D005391 8.9e-39 164.9 281 41.6
BcaC02g07413 Brassica carinata HOM05D000283 ORTHO05D005391 1.2e-38 164.5 264 42.0
C04p67220 Brassica napus HOM05D000283 ORTHO05D005391 1.2e-38 164.5 264 42.0
DCAR_005047 Daucus carota HOM05D000283 ORTHO05D005391 1.2e-38 164.5 270 40.0
AUR62025540 Chenopodium quinoa HOM05D000283 ORTHO05D005391 7.5e-38 161.8 262 40.1
Migut.F01533 Erythranthe guttata HOM05D000283 ORTHO05D005391 1.6e-35 154.1 409 32.5
A04p30550 Brassica napus HOM05D000283 ORTHO05D005391 2.7e-35 153.3 276 39.9
BraA04t18452Z Brassica rapa HOM05D000283 ORTHO05D005391 1.0e-34 151.4 276 39.5
SalBow6G0521 Salvia bowleyana HOM05D000283 ORTHO05D005391 3.9e-34 149.4 254 41.3
BcaB02g09134 Brassica carinata HOM05D000283 ORTHO05D005391 2.5e-33 146.7 275 36.7
Eucgr.G02777 Eucalyptus grandis HOM05D000283 ORTHO05D005391 4.3e-33 146.0 257 38.5
Phvul.007G008100 Phaseolus vulgaris HOM05D000283 ORTHO05D005391 2.8e-32 143.3 192 44.3
Ah.16g107830 Amaranthus hybridus HOM05D000283 ORTHO05D005391 6.2e-32 142.1 258 38.8
SHI28193 Sapria himalayana HOM05D000283 ORTHO05D005391 2.3e-31 140.2 258 38.0
Hund28801 Selenicereus undatus HOM05D000283 ORTHO05D005391 2.0e-30 137.1 261 36.8
Hund28802 Selenicereus undatus HOM05D000283 ORTHO05D005391 2.0e-30 137.1 261 36.8
Oeu058323.4 Olea europaea HOM05D000283 ORTHO05D005391 2.9e-29 133.3 166 49.4
Nn2g12827 Nelumbo nucifera HOM05D000283 ORTHO05D005391 8.3e-29 131.7 96 66.7
A05p07060 Brassica napus HOM05D000283 ORTHO05D005391 2.4e-28 130.2 168 47.6
BraA05t19671Z Brassica rapa HOM05D000283 ORTHO05D005391 2.4e-28 130.2 168 47.6
Os01g0836400 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 1.6e-27 127.5 249 38.2
BcaB06g29078 Brassica carinata HOM05D000283 ORTHO05D005391 1.0e-26 124.8 272 36.0
BolC4t22443H Brassica oleracea HOM05D000283 ORTHO05D005391 1.3e-26 124.4 271 37.6
EL10Ac2g03504 Beta vulgaris HOM05D000283 ORTHO05D005391 1.5e-25 120.9 202 40.1
CDE02G4519 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 6.8e-23 112.1 118 56.8
CAN.G1602.11 Capsicum annuum HOM05D000283 ORTHO05D005391 8.9e-23 111.7 129 51.9
AL5G26090 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 1.6e-19 100.9 262 30.9
ECA232G0450 Erigeron canadensis HOM05D000283 ORTHO05D005391 2.3e-18 97.1 247 34.8
Zm00001eb289820 Zea mays HOM05D000283 ORTHO05D005391 1.1e-17 94.7 130 43.1
Zm00001eb351500 Zea mays HOM05D000283 ORTHO05D005391 3.3e-17 93.2 132 42.4
Glyma.14G115250 Glycine max HOM05D000283 ORTHO05D212723 1.2e-16 91.3 64 68.8
SEGI_11289 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 1.8e-15 87.4 191 37.2
Potri.010G213700 Populus trichocarpa HOM05D000283 ORTHO05D005391 1.2e-11 74.7 76 56.6
AagrBONN_evm.TU.Sc2ySwM_117.607 Anthoceros agrestis HOM05D000283 ORTHO05D005391 1.6e-11 74.3 266 32.0
HPP92_015567 Vanilla planifolia HOM05D000283 ORTHO05D005391 2.1e-11 73.9 126 38.1
Os05g0462600 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 4.6e-11 72.8 133 35.3
SGA_v2.0_scaffold291G47345 Striga asiatica HOM05D000283 ORTHO05D005391 6.0e-11 72.4 291 30.2
Gohir.A03G091950 Gossypium hirsutum HOM05D000283 ORTHO05D217903 3.1e-07 60.1 53 54.7
Psat1g094640 Pisum sativum HOM05D000467 ORTHO05D000379 1.5e-06 57.8 65 50.8


User provided reference genes

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