Gene: AT2G39340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39340
  • Transcript Identifier AT2G39340.1
  • Gene Type Coding gene
  • Location Chr2 : 16424043-16429771 : positive

Gene Family Information

  • ID HOM05D000283
  • #Genes/#Species 1540/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39340.1
  • symbol SAC3A
  • Alias AtSAC3A
  • full_name yeast Sac3 homolog A
  • uniprot F4IUY8

Descriptions

  • Description SAC3/GANP/Nin1/mts3/eIF-3 p25 family
  • Computational description SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000380
IMP
Gene Ontologyalternative mRNA splicing, via spliceosome1
GO:0008380
IMP
Gene OntologyRNA splicing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000283
GO:0046982
ISO
PLAZA Homology (enrichment)protein heterodimerization activity HOM05D000283

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005062 SAC3/GANP/THP3, conserved domain
IPR045107 SAC3/GANP/THP3
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3