Gene: Solyc05g054910.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g054910.3
- Transcript Identifier Solyc05g054910.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 64084638-64099033 : negative
Gene Family Information
- ID HOM05D000283
- #Genes/#Species 1540/100
- Phylogenetic origin
- ID ORTHO05D005391
- #Genes/#Species 158/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g054910.3.1
- uniprot A0A3Q7GKV5
- gene_id Solyc05g054910
Descriptions
- Description SAC3/GANP/Nin1/mts3/eIF-3 p25 (AHRD V3.3 *** A0A200QHS5_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G39340 |
| GO:0000380 | ISO | PLAZA Integrative Orthology | alternative mRNA splicing, via spliceosome | AT2G39340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000283 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G39340 |
| GO:0046982 | ISO | PLAZA Homology (enrichment) | protein heterodimerization activity | HOM05D000283 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.10.2.1 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3 |