Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.1e-41 173.3 114 100.0
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 4.6e-37 157.9 110 93.6
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 1.3e-36 156.4 112 90.2
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.9e-36 154.8 109 91.7
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 8.6e-36 153.7 112 88.4
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 8.1e-34 147.1 109 78.0
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 8.9e-33 143.7 112 80.4
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 1.5e-32 142.9 109 71.6
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 3.4e-32 141.7 109 82.6
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 7.6e-32 140.6 108 85.2
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 7.6e-32 140.6 110 85.5
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 1.3e-31 139.8 113 80.5
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 1.7e-31 139.4 108 77.8
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 2.9e-31 138.7 109 73.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 4.9e-31 137.9 110 64.5
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 4.9e-31 137.9 109 82.6
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 6.4e-31 137.5 115 79.1
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 8.4e-31 137.1 109 64.2
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.1e-30 136.7 115 79.1
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.1e-30 136.7 109 81.7
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 1.1e-30 136.7 109 80.7
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 1.4e-30 136.3 105 81.9
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 1.4e-30 136.3 115 78.3
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 1.4e-30 136.3 110 82.7
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.9e-30 136.0 110 80.0
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 1.9e-30 136.0 111 82.9
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.9e-30 136.0 109 84.4
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 1.9e-30 136.0 109 85.3
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.9e-30 136.0 109 84.4
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 2.4e-30 135.6 113 74.3
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 2.4e-30 135.6 111 80.2
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 2.4e-30 135.6 107 79.4
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 3.2e-30 135.2 110 84.5
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.1e-30 134.8 113 74.3
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 4.1e-30 134.8 115 76.5
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 4.1e-30 134.8 115 62.6
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 5.4e-30 134.4 114 63.2
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.4e-30 134.4 115 62.6
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 7.1e-30 134.0 109 73.4
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 7.1e-30 134.0 111 82.9
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 9.2e-30 133.7 112 82.1
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 9.2e-30 133.7 112 82.1
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 9.2e-30 133.7 113 79.6
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 1.6e-29 132.9 109 70.6
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 2.7e-29 132.1 124 73.4
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 3.5e-29 131.7 109 81.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.5e-29 131.7 109 81.7
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 3.5e-29 131.7 110 78.2
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 4.6e-29 131.3 109 63.3
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 4.6e-29 131.3 111 72.1
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 6.0e-29 131.0 107 61.7
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 6.0e-29 131.0 110 79.1
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 7.8e-29 130.6 109 62.4
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 7.8e-29 130.6 109 80.7
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.0e-28 130.2 110 75.5
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.0e-28 130.2 109 74.3
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 109 80.7
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 1.3e-28 129.8 109 80.7
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.7e-28 129.4 109 80.7
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 1.7e-28 129.4 111 80.2
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 2.3e-28 129.0 112 77.7
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 3.0e-28 128.6 109 81.7
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 3.9e-28 128.3 112 79.5
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 3.9e-28 128.3 114 74.6
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 6.6e-28 127.5 110 78.2
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 8.6e-28 127.1 106 78.3
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.9e-27 125.9 110 80.0
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 3.3e-27 125.2 109 73.4
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 5.6e-27 124.4 109 78.0
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 5.6e-27 124.4 109 77.1
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 5.6e-27 124.4 110 60.9
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 7.3e-27 124.0 109 77.1
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 9.6e-27 123.6 109 76.1
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 3.6e-26 121.7 113 74.3
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 1.1e-25 120.2 113 63.7
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 1.1e-25 120.2 105 59.0
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.1e-25 118.6 113 69.0
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.0e-25 118.2 108 57.4
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 1.2e-24 116.7 110 74.5
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.0e-24 115.9 106 58.5
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 9.9e-24 113.6 94 66.0
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 2.9e-23 112.1 113 58.4
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 6.4e-23 110.9 112 66.1
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 1.4e-22 109.8 116 69.0
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 1.4e-22 109.8 108 71.3
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.2e-22 108.6 111 54.1
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 1.2e-21 106.7 112 70.5
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.6e-21 106.3 82 69.5
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 1.6e-21 106.3 98 70.4
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 3.5e-21 105.1 112 68.8
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 3.9e-20 101.7 83 79.5
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 6.6e-20 100.9 86 84.9
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 1.9e-19 99.4 113 68.1
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.9e-19 99.4 86 83.7
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 5.6e-19 97.8 114 51.8
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 1.6e-18 96.3 87 58.6
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 2.1e-18 95.9 88 59.1
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 2.8e-18 95.5 113 67.3
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 2.8e-18 95.5 87 81.6
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 4.8e-18 94.7 53 88.7
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 8.1e-18 94.0 115 64.3
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 1.8e-17 92.8 112 65.2
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.8e-17 92.8 89 73.0
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 2.4e-17 92.4 204 41.2
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 3.1e-17 92.0 112 65.2
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 3.1e-17 92.0 51 86.3
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 4.0e-17 91.7 84 58.3
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 4.0e-17 91.7 84 64.3
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 5.3e-17 91.3 110 63.6
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 9.0e-17 90.5 113 63.7
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.2e-16 90.1 84 66.7
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 1.2e-16 90.1 88 52.3
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 1.2e-16 90.1 51 88.2
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 1.5e-16 89.7 107 59.8
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 2.0e-16 89.4 112 63.4
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 2.0e-16 89.4 111 54.1
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.4e-16 88.6 51 82.4
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 9.9e-16 87.0 88 53.4
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.7e-15 86.3 81 79.0
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 7.1e-14 80.9 116 56.9
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 2.1e-13 79.3 73 53.4
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 2.1e-13 79.3 115 59.1
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.7e-13 79.0 90 53.3
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 1.3e-12 76.6 105 61.0
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 2.3e-12 75.9 88 47.7
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 5.1e-12 74.7 114 46.5
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 1.5e-11 73.2 116 53.4
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 2.1e-10 69.3 91 64.8
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 3.6e-10 68.6 60 58.3
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 1.1e-09 67.0 57 61.4
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 3.1e-09 65.5 82 61.0
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 5.3e-09 64.7 90 64.4
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 6.9e-09 64.3 93 37.6
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 1.5e-08 63.2 60 85.0
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 7.6e-08 60.8 61 52.5
CSS0003202 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.1e-06 54.3 51 54.9
CSS0037049 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 7.1e-06 54.3 51 54.9


User provided reference genes

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