Gene: Solyc02g068110.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g068110.4
- Transcript Identifier Solyc02g068110.4.1
- Gene Type Coding gene
- Location SL4.0ch02 : 36168318-36171574 : positive
Gene Family Information
- ID HOM05D005515
- #Genes/#Species 139/92
- Phylogenetic origin
- ID ORTHO05D006620
- #Genes/#Species 140/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc02g068110.4.1
- uniprot A0A3Q7F2G9
- gene_id Solyc02g068110
Descriptions
- Description Transcription and mRNA export factor ENY2 (AHRD V3.3 *** A0A2G3D3N3_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0035616 | ISO | PLAZA Integrative Orthology | histone H2B conserved C-terminal lysine deubiquitination | AT3G27100 |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0016578 | IBA | GOA Database | histone deubiquitination | |
| GO:0016973 | IBA | GOA Database | poly(A)+ mRNA export from nucleus | |
| GO:0006406 | IEA | GOA Database | mRNA export from nucleus | |
| GO:0006406 | IEA | InterPro | mRNA export from nucleus | |
| GO:0045893 | IEA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0045893 | IEA | InterPro | positive regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003713 | IBA IEA | GOA Database | transcription coactivator activity | |
| GO:0003713 | IEA | InterPro | transcription coactivator activity | |
| GO:0003682 | IBA | GOA Database | chromatin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071819 | IBA | GOA Database | DUBm complex | |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT3G27100 |
| GO:0070461 | ISO | PLAZA Integrative Orthology | SAGA-type complex | AT3G27100 |
| GO:0000124 | IBA IEA | GOA Database | SAGA complex | |
| GO:0000124 | IEA | InterPro | SAGA complex | |
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IEA | InterPro | nuclear pore |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.4.3.2.3 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.DUB histone deubiquitinating module.component SUS1/ENY2 |