Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR011G0002 Trochodendron aralioides HOM05D004364 ORTHO05D019261 7.5e-89 330.5 165 100.0
Nn1g06827 Nelumbo nucifera HOM05D004364 ORTHO05D006299 1.1e-26 124.0 158 50.0
TAR626G1658 Trochodendron aralioides HOM05D004364 ORTHO05D006299 6.4e-24 114.8 149 49.0
GSVIVG01014465001 Vitis vinifera HOM05D004364 ORTHO05D006299 4.6e-22 108.6 158 48.1
Aqoxy1G03944 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 7.9e-22 107.8 156 49.4
Ciclev10007478m.g Citrus clementina HOM05D004364 ORTHO05D006299 8.7e-21 104.4 149 48.3
Lj8C162G4 Lonicera japonica HOM05D004364 ORTHO05D006299 1.1e-20 104.0 146 49.3
Hma1.2p1_0015F.1_g010280 Hydrangea macrophylla HOM05D004364 ORTHO05D006299 1.5e-20 103.6 148 47.3
PSO210G4872 Papaver somniferum HOM05D004364 ORTHO05D006299 3.6e-19 99.0 149 46.3
Manes.03G117700 Manihot esculenta HOM05D004364 ORTHO05D006299 4.8e-19 98.6 145 44.1
CSS0001646 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 1.8e-18 96.7 145 47.6
CSS0013066 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 1.8e-18 96.7 145 47.6
RcHm_v2.0_Chr5g0036241 Rosa chinensis HOM05D004364 ORTHO05D006299 1.8e-18 96.7 156 45.5
CiPaw.11G178500 Carya illinoinensis HOM05D004364 ORTHO05D006299 2.4e-18 96.3 147 45.6
Lj3g0027191 Lotus japonicus HOM05D004364 ORTHO05D006299 3.1e-18 95.9 161 43.5
Prupe.4G192200 Prunus persica HOM05D004364 ORTHO05D006299 3.1e-18 95.9 156 45.5
Atru.chr2.2938 Acer truncatum HOM05D004364 ORTHO05D006299 4.0e-18 95.5 136 48.5
Sed0018829 Sechium edule HOM05D004364 ORTHO05D006299 4.0e-18 95.5 145 45.5
Glyma.06G255000 Glycine max HOM05D004364 ORTHO05D006299 5.3e-18 95.1 155 45.2
Eucgr.F01066 Eucalyptus grandis HOM05D004364 ORTHO05D006299 9.0e-18 94.4 159 42.8
PSO832G2674 Papaver somniferum HOM05D004364 ORTHO05D006299 2.0e-17 93.2 149 45.0
Potri.001G408800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.6e-17 92.8 136 47.1
Sp3g18670 Schrenkiella parvula HOM05D004364 ORTHO05D006299 2.6e-17 92.8 143 46.2
DCAR_008692 Daucus carota HOM05D004364 ORTHO05D006299 4.5e-17 92.0 156 45.5
Cpa.g.sc12.20 Carica papaya HOM05D004364 ORTHO05D006299 5.8e-17 91.7 146 45.2
Ca_01795_v3 Cicer arietinum L. HOM05D004364 ORTHO05D006299 5.8e-17 91.7 155 47.1
MD11G1234900 Malus domestica HOM05D004364 ORTHO05D006299 5.8e-17 91.7 143 47.6
FAN21G1304 Fragaria x ananassa HOM05D004364 ORTHO05D006299 7.6e-17 91.3 156 44.9
Aqoxy5G02435 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 9.9e-17 90.9 153 43.8
PGR083G1074 Punica granatum HOM05D004364 ORTHO05D006299 9.9e-17 90.9 159 42.8
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 9.9e-17 90.9 143 44.1
ATR1132G023 Amborella trichopoda HOM05D004364 ORTHO05D006299 1.3e-16 90.5 138 42.0
Haze_09550 Corylus avellana HOM05D004364 ORTHO05D006299 1.3e-16 90.5 166 42.8
RhsimUnG0257500 Rhododendron simsii HOM05D004364 ORTHO05D006299 2.9e-16 89.4 154 44.2
EL10Ac4g08041 Beta vulgaris HOM05D004364 ORTHO05D006299 3.8e-16 89.0 149 45.6
CARHR096430 Cardamine hirsuta HOM05D004364 ORTHO05D006299 3.8e-16 89.0 143 44.8
Cfa020489 Carpinus fangiana HOM05D004364 ORTHO05D006299 3.8e-16 89.0 166 42.2
MELO3C018182.2 Cucumis melo HOM05D004364 ORTHO05D006299 3.8e-16 89.0 137 43.8
ECA240G1374 Erigeron canadensis HOM05D004364 ORTHO05D006299 3.8e-16 89.0 145 44.8
Psat5g247520 Pisum sativum HOM05D004364 ORTHO05D006299 3.8e-16 89.0 155 44.5
Sabra11G0111700 Salix brachista HOM05D004364 ORTHO05D006299 3.8e-16 89.0 143 44.8
AT3G20630 Arabidopsis thaliana HOM05D004364 ORTHO05D006299 4.9e-16 88.6 143 44.1
FvH4_3g21160 Fragaria vesca HOM05D004364 ORTHO05D006299 4.9e-16 88.6 156 44.2
Hund02178 Selenicereus undatus HOM05D004364 ORTHO05D006299 4.9e-16 88.6 158 43.7
TPR.G32881 Trifolium pratense HOM05D004364 ORTHO05D006299 4.9e-16 88.6 155 45.8
ClCG11G018570 Citrullus lanatus HOM05D004364 ORTHO05D006299 6.4e-16 88.2 144 43.1
Lsat_1_v5_gn_0_5341 Lactuca sativa HOM05D004364 ORTHO05D006299 6.4e-16 88.2 147 44.2
Gohir.D08G031200 Gossypium hirsutum HOM05D004364 ORTHO05D006299 8.4e-16 87.8 148 43.2
Gorai.004G028800 Gossypium raimondii HOM05D004364 ORTHO05D006299 8.4e-16 87.8 148 43.2
FAN11G0387 Fragaria x ananassa HOM05D004364 ORTHO05D006299 1.1e-15 87.4 156 43.6
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 1.4e-15 87.0 156 43.6
Phvul.011G156100 Phaseolus vulgaris HOM05D004364 ORTHO05D006299 1.4e-15 87.0 157 43.9
Migut.H01895 Erythranthe guttata HOM05D004364 ORTHO05D006299 1.9e-15 86.7 136 42.6
Manes.15G081800 Manihot esculenta HOM05D004364 ORTHO05D006299 1.9e-15 86.7 148 43.9
Gohir.A08G020600 Gossypium hirsutum HOM05D004364 ORTHO05D006299 2.4e-15 86.3 148 42.6
Ah.04g165340 Amaranthus hybridus HOM05D004364 ORTHO05D006299 3.2e-15 85.9 155 41.3
A05p28190 Brassica napus HOM05D004364 ORTHO05D006299 5.5e-15 85.1 143 44.1
FAN25G2975 Fragaria x ananassa HOM05D004364 ORTHO05D006299 5.5e-15 85.1 149 43.6
vmacro09573 Vaccinium macrocarpon HOM05D004364 ORTHO05D006299 5.5e-15 85.1 154 42.2
AL3G34510 Arabidopsis lyrata HOM05D004364 ORTHO05D006299 7.1e-15 84.7 143 43.4
BcaB06g26128 Brassica carinata HOM05D004364 ORTHO05D006299 7.1e-15 84.7 143 44.1
BraA05t21700Z Brassica rapa HOM05D004364 ORTHO05D006299 7.1e-15 84.7 143 44.1
MD03G1217200 Malus domestica HOM05D004364 ORTHO05D006299 7.1e-15 84.7 143 44.8
SalBow7G1127 Salvia bowleyana HOM05D004364 ORTHO05D006299 7.1e-15 84.7 141 42.6
CsaV3_3G044300 Cucumis sativus L. HOM05D004364 ORTHO05D006299 9.3e-15 84.3 137 40.9
Thhalv10020069m.g Eutrema salsugineum HOM05D004364 ORTHO05D006299 9.3e-15 84.3 143 44.1
Potri.011G125800 Populus trichocarpa HOM05D004364 ORTHO05D006299 9.3e-15 84.3 143 43.4
Sc16g0006700 Simmondsia chinensis HOM05D004364 ORTHO05D006299 1.2e-14 84.0 151 41.7
BcaC05g28303 Brassica carinata HOM05D004364 ORTHO05D006299 1.6e-14 83.6 143 43.4
A03p41850 Brassica napus HOM05D004364 ORTHO05D006299 1.6e-14 83.6 143 44.1
BraA03t13338Z Brassica rapa HOM05D004364 ORTHO05D006299 1.6e-14 83.6 143 44.1
Glyma.12G146600 Glycine max HOM05D004364 ORTHO05D006299 1.6e-14 83.6 154 42.2
arahy.Tifrunner.gnm1.ann1.19RIMK Arachis hypogaea HOM05D004364 ORTHO05D006299 2.1e-14 83.2 137 48.9
Duzib170G0088 Durio zibethinus HOM05D004364 ORTHO05D006299 2.1e-14 83.2 148 42.6
TWI39G0400 Tripterygium wilfordii HOM05D004364 ORTHO05D006299 2.7e-14 82.8 138 45.7
Aa31LG8G7430 Aethionema arabicum HOM05D004364 ORTHO05D006299 3.5e-14 82.4 143 42.7
THA.LOC104816919 Tarenaya hassleriana HOM05D004364 ORTHO05D006299 3.5e-14 82.4 143 42.7
BcaB04g19118 Brassica carinata HOM05D004364 ORTHO05D006299 4.6e-14 82.0 143 42.7
Os01g0177200 Oryza sativa ssp. japonica HOM05D004364 ORTHO05D006299 4.6e-14 82.0 136 43.4
arahy.Tifrunner.gnm1.ann1.CZGD0C Arachis hypogaea HOM05D004364 ORTHO05D006299 6.0e-14 81.6 137 48.2
Nitab4.5_0001386g0060 Nicotiana tabacum HOM05D004364 ORTHO05D006299 6.0e-14 81.6 145 40.0
arahy.Tifrunner.gnm1.ann1.B7TU6S Arachis hypogaea HOM05D004364 ORTHO05D006299 7.9e-14 81.3 137 48.2
BcaC01g03545 Brassica carinata HOM05D004364 ORTHO05D006299 7.9e-14 81.3 143 43.4
C03p51230 Brassica napus HOM05D004364 ORTHO05D006299 7.9e-14 81.3 143 43.4
BolC3t17413H Brassica oleracea HOM05D004364 ORTHO05D006299 7.9e-14 81.3 143 43.4
BolC5t33082H Brassica oleracea HOM05D004364 ORTHO05D006299 1.0e-13 80.9 136 44.1
Lalb_Chr06g0175311 Lupinus albus HOM05D004364 ORTHO05D006299 1.0e-13 80.9 142 44.4
Oeu060533.1 Olea europaea HOM05D004364 ORTHO05D006299 1.0e-13 80.9 147 42.2
Carub.0003s2061 Capsella rubella HOM05D004364 ORTHO05D006299 1.3e-13 80.5 136 44.1
Nitab4.5_0000092g0270 Nicotiana tabacum HOM05D004364 ORTHO05D006299 1.3e-13 80.5 145 39.3
CANSAT11G0334 Cannabis sativa HOM05D004364 ORTHO05D006299 2.3e-13 79.7 136 42.6
HanXRQChr13g0407291 Helianthus annuus HOM05D004364 ORTHO05D006299 2.3e-13 79.7 145 43.4
Medtr2g081180 Medicago truncatula HOM05D004364 ORTHO05D006299 2.3e-13 79.7 136 45.6
MSTRG.12935 Avicennia marina HOM05D004364 ORTHO05D006299 3.9e-13 79.0 134 41.0
Peaxi162Scf01216g00070 Petunia axillaris HOM05D004364 ORTHO05D006299 3.9e-13 79.0 154 40.3
C05p43630 Brassica napus HOM05D004364 ORTHO05D006299 5.1e-13 78.6 143 42.0
GSVIVG01015714001 Vitis vinifera HOM05D004364 ORTHO05D019261 5.1e-13 78.6 85 54.1
SGA_v2.0_scaffold9G04963 Striga asiatica HOM05D004364 ORTHO05D006299 6.7e-13 78.2 136 41.2
Zm00001eb336890 Zea mays HOM05D004364 ORTHO05D006299 8.7e-13 77.8 136 41.2
HanXRQChr03g0076071 Helianthus annuus HOM05D004364 ORTHO05D006299 1.1e-12 77.4 154 40.9
Lj1g0005584 Lotus japonicus HOM05D004364 ORTHO05D006299 1.1e-12 77.4 123 44.7
Thecc.07G069000 Theobroma cacao HOM05D004364 ORTHO05D006299 1.1e-12 77.4 148 40.5
Actinidia35287 Actinidia chinensis HOM05D004364 ORTHO05D006299 1.5e-12 77.0 126 45.2
Peaxi162Scf00177g00118 Petunia axillaris HOM05D004364 ORTHO05D006299 1.5e-12 77.0 143 41.3
Lalb_Chr02g0159341 Lupinus albus HOM05D004364 ORTHO05D006299 1.9e-12 76.6 142 42.3
COL.COLO4_09498 Corchorus olitorius HOM05D004364 ORTHO05D006299 2.5e-12 76.3 148 40.5
Solyc07g063650.4 Solanum lycopersicum HOM05D004364 ORTHO05D006299 3.3e-12 75.9 145 38.6
Sopen07g031830 Solanum pennellii HOM05D004364 ORTHO05D006299 3.3e-12 75.9 145 38.6
GSVIVG01015715001 Vitis vinifera HOM05D004364 ORTHO05D019261 4.3e-12 75.5 96 52.1
SEGI_22005 Sequoiadendron giganteum HOM05D004364 ORTHO05D006299 1.1e-10 70.9 137 43.1
CAN.G162.111 Capsicum annuum HOM05D004364 ORTHO05D006299 1.4e-10 70.5 145 38.6
AUR62041167 Chenopodium quinoa HOM05D004364 ORTHO05D006299 1.4e-10 70.5 142 39.4
Mapoly0028s0083 Marchantia polymorpha HOM05D004364 ORTHO05D006299 1.4e-10 70.5 143 41.3
Sed0014921 Sechium edule HOM05D004364 ORTHO05D006299 3.1e-10 69.3 58 60.3
HPP92_005995 Vanilla planifolia HOM05D004364 ORTHO05D006299 4.0e-10 68.9 130 36.9
Cc05_g12790 Coffea canephora HOM05D004364 ORTHO05D006299 6.9e-10 68.2 137 37.2
CDE01G0428 Ceratophyllum demersum HOM05D004364 ORTHO05D006299 9.0e-10 67.8 139 40.3
unitig_21.g20140 Utricularia gibba HOM05D004364 ORTHO05D006299 9.0e-10 67.8 138 39.1
TPR.G1046 Trifolium pratense HOM05D004364 ORTHO05D019261 5.8e-09 65.1 149 36.2
Pp3c19_17130 Physcomitrium patens HOM05D004364 ORTHO05D006299 3.8e-08 62.4 137 32.1
AUR62029293 Chenopodium quinoa HOM05D004364 ORTHO05D006299 7.1e-07 58.2 156 35.9
TAR624G0100 Trochodendron aralioides HOM05D004364 ORTHO05D006299 7.1e-07 58.2 111 40.5
SEGI_31233 Sequoiadendron giganteum HOM05D004364 ORTHO05D019261 2.1e-06 56.6 78 44.9


User provided reference genes

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