Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn1483_0010 Schrenkiella parvula HOM05D004093 ORTHO05D004981 5.2e-26 120.2 56 100.0
CBR_g7978 Chara braunii HOM05D004093 ORTHO05D004981 1.1e-10 69.3 54 61.1
Ah.05g177500 Amaranthus hybridus HOM05D004093 ORTHO05D004981 1.4e-10 68.9 53 56.6
EL10Ac1g00697 Beta vulgaris HOM05D004093 ORTHO05D004981 4.0e-10 67.4 53 54.7
Medtr1g113700 Medicago truncatula HOM05D004093 ORTHO05D004981 4.0e-10 67.4 53 52.8
CDE04G3016 Ceratophyllum demersum HOM05D004093 ORTHO05D004981 6.8e-10 66.6 53 54.7
Solyc01g106740.4 Solanum lycopersicum HOM05D004093 ORTHO05D004981 6.8e-10 66.6 53 54.7
Sopen01g049060 Solanum pennellii HOM05D004093 ORTHO05D004981 6.8e-10 66.6 53 54.7
Migut.N01121 Erythranthe guttata HOM05D004093 ORTHO05D004981 8.9e-10 66.2 53 56.6
COL.COLO4_17799 Corchorus olitorius HOM05D004093 ORTHO05D004981 1.2e-09 65.9 53 54.7
Prupe.8G151800 Prunus persica HOM05D004093 ORTHO05D004981 1.2e-09 65.9 53 54.7
Sc20g0001830 Simmondsia chinensis HOM05D004093 ORTHO05D004981 1.2e-09 65.9 53 54.7
Manes.07G052300 Manihot esculenta HOM05D004093 ORTHO05D004981 1.5e-09 65.5 53 52.8
unitig_62.g23638 Utricularia gibba HOM05D004093 ORTHO05D004981 1.5e-09 65.5 53 54.7
Lsat_1_v5_gn_9_113901 Lactuca sativa HOM05D004093 ORTHO05D004981 2.0e-09 65.1 53 54.7
Potri.009G084300 Populus trichocarpa HOM05D004093 ORTHO05D004981 2.0e-09 65.1 53 54.7
Eucgr.I02505 Eucalyptus grandis HOM05D004093 ORTHO05D004981 2.6e-09 64.7 51 52.9
Sed0024148 Sechium edule HOM05D004093 ORTHO05D004981 2.6e-09 64.7 53 50.9
Atru.chr5.2252 Acer truncatum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
Aa31sc178G40 Aethionema arabicum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 54.7
DCAR_021934 Daucus carota HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
HanXRQChr03g0069101 Helianthus annuus HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
MD10G1112200 Malus domestica HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 50.9
Nitab4.5_0000772g0040 Nicotiana tabacum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
Nitab4.5_0010657g0010 Nicotiana tabacum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
Oeu018200.1 Olea europaea HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
QL11p028820 Quercus lobata HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
SEGI_06015 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 50 56.0
SEGI_18816 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 50 56.0
SEGI_31310 Sequoiadendron giganteum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 50 56.0
PGSC0003DMG402005133 Solanum tuberosum HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
TWI59G0012 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 3.4e-09 64.3 53 52.8
MELO3C018029.2 Cucumis melo HOM05D004093 ORTHO05D004981 4.4e-09 63.9 53 52.8
TWI14G0771 Tripterygium wilfordii HOM05D004093 ORTHO05D004981 4.4e-09 63.9 53 52.8
Ciclev10028050m.g Citrus clementina HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
Duzib052G0943 Durio zibethinus HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 50.9
HanXRQChr16g0510261 Helianthus annuus HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
Medtr4g052070 Medicago truncatula HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 50.9
Peaxi162Scf00016g03248 Petunia axillaris HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
Potri.001G289001 Populus trichocarpa HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
Rhsim11G0149600 Rhododendron simsii HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
Sabra16G0180800 Salix brachista HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 54.7
vmacro01935 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 5.8e-09 63.5 53 52.8
BraA01t00441Z Brassica rapa HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 52.8
Dinv09528 Davidia involucrata HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 50.9
Lj5C222T15 Lonicera japonica HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 50.9
Medtr4g120810 Medicago truncatula HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 50.9
Medtr8g104740 Medicago truncatula HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 50.9
THA.LOC104807205 Tarenaya hassleriana HOM05D004093 ORTHO05D004981 7.5e-09 63.2 53 52.8
Actinidia04397 Actinidia chinensis HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 52.8
CARHR241850 Cardamine hirsuta HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 52.8
CsaV3_4G000020 Cucumis sativus L. HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 50.9
FvH4_2g03040 Fragaria vesca HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 52.8
FAN15G0664 Fragaria x ananassa HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 52.8
Sabra09G0065000 Salix brachista HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 52.8
TPR.G32673 Trifolium pratense HOM05D004093 ORTHO05D004981 9.8e-09 62.8 53 50.9
Aqoxy2G01432 Aquilegia oxysepala HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
AL7G17710 Arabidopsis lyrata HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
AT4G33760 Arabidopsis thaliana HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
arahy.Tifrunner.gnm1.ann1.14EEYB Arachis hypogaea HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 50.9
arahy.Tifrunner.gnm1.ann1.K8EMZF Arachis hypogaea HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 50.9
BcaB03g11876 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
BcaC01g00967 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
BcaNung04674 Brassica carinata HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
A08p17410 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
A08p17440 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
C01p04970 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
C03p86430 Brassica napus HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
BolC3t20936H Brassica oleracea HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
Carub.0007s0667 Capsella rubella HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
CAN.G606.83 Capsicum annuum HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
Gohir.A01G180900 Gossypium hirsutum HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 50.9
Gohir.D01G172000 Gossypium hirsutum HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 50.9
Oeu037299.1 Olea europaea HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 49.1
Sp7g31500 Schrenkiella parvula HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 52.8
GSVIVG01037036001 Vitis vinifera HOM05D004093 ORTHO05D004981 1.3e-08 62.4 53 50.9
A01p04580 Brassica napus HOM05D004093 ORTHO05D004981 1.7e-08 62.0 53 50.9
CSS0001341 Camellia sinensis var. sinensis HOM05D004093 ORTHO05D004981 1.7e-08 62.0 50 54.0
CiPaw.06G163100 Carya illinoinensis HOM05D004093 ORTHO05D004981 1.7e-08 62.0 53 49.1
Cre09.g390986 Chlamydomonas reinhardtii HOM05D004093 ORTHO05D004981 1.7e-08 62.0 54 50.0
Thhalv10024609m.g Eutrema salsugineum HOM05D004093 ORTHO05D004981 1.7e-08 62.0 53 50.9
Gorai.002G213600 Gossypium raimondii HOM05D004093 ORTHO05D004981 1.7e-08 62.0 53 50.9
Lj4g0018571 Lotus japonicus HOM05D004093 ORTHO05D004981 1.7e-08 62.0 53 50.9
BcaC09g52186 Brassica carinata HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 50.9
BolC1t00478H Brassica oleracea HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 50.9
CANSAT25G3849 Cannabis sativa HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 52.8
Lalb_Chr16g0387791 Lupinus albus HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 49.1
MBI16_g34665_MAGBIO Magnolia biondii HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 50.9
Os01g0153400 Oryza sativa ssp. japonica HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 50.9
Phvul.011G054700 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 49.1
VMungo0251G2341 Vigna mungo HOM05D004093 ORTHO05D004981 2.2e-08 61.6 53 50.9
Cfa004713 Carpinus fangiana HOM05D004093 ORTHO05D004981 2.9e-08 61.2 53 49.1
Ca_17297_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 2.9e-08 61.2 53 50.9
Ca_17304_v3 Cicer arietinum L. HOM05D004093 ORTHO05D004981 2.9e-08 61.2 53 50.9
ECA233G6085 Erigeron canadensis HOM05D004093 ORTHO05D004981 2.9e-08 61.2 53 50.9
Psat7g009880 Pisum sativum HOM05D004093 ORTHO05D004981 2.9e-08 61.2 53 49.1
MSTRG.27768 Avicennia marina HOM05D004093 ORTHO05D004981 3.7e-08 60.8 53 50.9
Dinv16064 Davidia involucrata HOM05D004093 ORTHO05D004981 3.7e-08 60.8 53 49.1
Phvul.002G318600 Phaseolus vulgaris HOM05D004093 ORTHO05D004981 3.7e-08 60.8 53 49.1
SGA_v2.0_scaffold219G42544 Striga asiatica HOM05D004093 ORTHO05D004981 3.7e-08 60.8 53 49.1
Thecc.02G031600 Theobroma cacao HOM05D004093 ORTHO05D004981 3.7e-08 60.8 53 50.9
ClCG10G009970 Citrullus lanatus HOM05D004093 ORTHO05D004981 4.9e-08 60.5 53 49.1
AagrBONN_evm.TU.Sc2ySwM_117.2705 Anthoceros agrestis HOM05D004093 ORTHO05D004981 6.4e-08 60.1 53 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2710 Anthoceros agrestis HOM05D004093 ORTHO05D004981 6.4e-08 60.1 53 52.8
RcHm_v2.0_Chr6g0247831 Rosa chinensis HOM05D004093 ORTHO05D004981 6.4e-08 60.1 53 50.9
Zm00001eb124020 Zea mays HOM05D004093 ORTHO05D004981 6.4e-08 60.1 53 49.1
CiPaw.05G021800 Carya illinoinensis HOM05D004093 ORTHO05D004981 8.3e-08 59.7 53 49.1
ECA233G4634 Erigeron canadensis HOM05D004093 ORTHO05D004981 8.3e-08 59.7 53 49.1
Glyma.05G236700 Glycine max HOM05D004093 ORTHO05D004981 8.3e-08 59.7 53 49.1
HPP92_001209 Vanilla planifolia HOM05D004093 ORTHO05D004981 8.3e-08 59.7 53 50.9
Cc02_g20210 Coffea canephora HOM05D004093 ORTHO05D004981 1.1e-07 59.3 53 50.9
Hma1.2p1_1758F.1_g301170 Hydrangea macrophylla HOM05D004093 ORTHO05D004981 1.1e-07 59.3 53 49.1
Mapoly0029s0082 Marchantia polymorpha HOM05D004093 ORTHO05D004981 1.1e-07 59.3 54 46.3
PSO447G0184 Papaver somniferum HOM05D004093 ORTHO05D004981 1.1e-07 59.3 53 49.1
Pp3c20_5000 Physcomitrium patens HOM05D004093 ORTHO05D004981 1.1e-07 59.3 53 49.1
TAR159G0001 Trochodendron aralioides HOM05D004093 ORTHO05D004981 1.1e-07 59.3 53 49.1
Glyma.08G043900 Glycine max HOM05D004093 ORTHO05D004981 1.4e-07 58.9 50 48.0
Nn6g32059 Nelumbo nucifera HOM05D004093 ORTHO05D004981 1.4e-07 58.9 53 50.9
PGR119G0904 Punica granatum HOM05D004093 ORTHO05D004981 1.4e-07 58.9 53 49.1
MCO14G538 Micromonas commoda HOM05D004093 ORTHO05D004981 3.2e-07 57.8 54 44.4
AUR62013810 Chenopodium quinoa HOM05D004093 ORTHO05D004981 4.1e-07 57.4 63 44.4
vmacro20830 Vaccinium macrocarpon HOM05D004093 ORTHO05D004981 7.0e-07 56.6 50 48.0
ATR0767G039 Amborella trichopoda HOM05D004093 ORTHO05D004981 9.2e-07 56.2 50 48.0
Glyma.16G091002 Glycine max HOM05D004093 ORTHO05D004981 1.2e-06 55.8 53 43.4
PSO210G2081 Papaver somniferum HOM05D004093 ORTHO05D004981 1.2e-06 55.8 53 47.2
PRCOL_00006371 Prasinoderma coloniale HOM05D004093 ORTHO05D004981 1.2e-06 55.8 53 52.8
SMO364G0944 Selaginella moellendorffii HOM05D004093 ORTHO05D004981 2.7e-06 54.7 54 46.3


User provided reference genes

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