Gene: FAN15G0664
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN15G0664
- Transcript Identifier FAN15G0664.1
- Gene Type Coding gene
- Location Fvb2-4 : 1303998-1316730 : negative
Gene Family Information
- ID HOM05D004093
- #Genes/#Species 172/98
- Phylogenetic origin
- ID ORTHO05D004981
- #Genes/#Species 166/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb2-4-snap-gene-13.51.v1.0.a1
- pacid 50511047
Descriptions
- Description PF00152//PF00319//PF01336//PF02938 - tRNA synthetases class II (D, K and N) (tRNA-synt_2) // SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) // OB-fold nucleic acid binding domain (tRNA_anti-codon) // GAD domain (GAD)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016874 | IEA | InterPro | ligase activity | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G33760 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G33760 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004115 | GAD-like domain superfamily |
| IPR004524 | Aspartate-tRNA ligase, type 1 |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR036879 | Transcription factor, MADS-box superfamily |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR029351 | GAD domain |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR002312 | Aspartyl/Asparaginyl-tRNA synthetase, class IIb |
| IPR002100 | Transcription factor, MADS-box |
| IPR033896 | MADS MEF2-like |