Gene: Sopen01g049060

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g049060
  • Transcript Identifier Sopen01g049060.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 105119196-105130685 : negative

Gene Family Information

  • ID HOM05D004093
  • #Genes/#Species 172/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g049060.1

Descriptions

  • Description tRNA synthetase class II (D, K and N) family protein | FUNCTIONS IN: in 6 functions | INVOLVED IN: aspartyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation | LOCATED IN: mitochondrion, chloroplast, membrane, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Nucleic acid binding, OB-fold, tRNA/helicase-type , Aspartyl/Asparaginyl-tRNA synthetase, class IIb , Aminoacyl-tRNA synthetase, class II, conserved domain , Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type , Nucleic acid-binding, OB-fold-like , Aminoacyl-tRNA synthetase, class II (D/K/N) , Aminoacyl-tRNA synthetase, class II (D/K/N)-like , Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type, C-terminal , GAD domain | BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016874
IEA
InterProligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G33760
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G33760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029351 GAD domain
IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR004524 Aspartate-tRNA ligase, type 1
IPR012340 Nucleic acid-binding, OB-fold
IPR004115 GAD-like domain superfamily
IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb
Mapman id Description
17.2.4 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase