Gene: Pp3c20_5000
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_5000
- Transcript Identifier Pp3c20_5000V3.1
- Gene Type Coding gene
- Location Chr20 : 3019435-3024558 : positive
Gene Family Information
- ID HOM05D004093
- #Genes/#Species 172/98
- Phylogenetic origin
- ID ORTHO05D004981
- #Genes/#Species 166/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c20_5000V3.1
- pacid 32946365
- alias Phpat.020G020700
- alias Phypa_114090
- alias Pp1s9_39V6
- uniprot A0A2K1IU26
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | GOA Database | tRNA aminoacylation for protein translation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006412 | IEA | GOA Database | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0016874 | IEA | InterPro | ligase activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | GOA Database | aminoacyl-tRNA ligase activity | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004524 | Aspartate-tRNA ligase, type 1 |
| IPR004115 | GAD-like domain superfamily |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR002312 | Aspartyl/Asparaginyl-tRNA synthetase, class IIb |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR029351 | GAD domain |
| Mapman id | Description |
|---|---|
| 17.2.4 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase |