Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 4.6e-155 551.2 280 100.0
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.2e-93 346.3 329 60.5
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 1.5e-89 333.6 334 57.8
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 1.7e-88 330.1 329 58.4
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 6.9e-87 324.7 334 56.9
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 2.0e-86 323.2 323 58.2
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 1.3e-85 320.5 342 55.3
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 5.5e-84 315.1 320 56.9
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 5.5e-84 315.1 328 56.7
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 9.4e-84 314.3 321 56.4
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 5.9e-78 295.0 331 53.8
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.3e-77 293.9 331 53.5
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 7.2e-76 288.1 324 52.8
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-75 287.3 320 54.4
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-75 287.0 294 57.5
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.1e-75 286.6 331 52.6
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 8.0e-75 284.6 334 53.6
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 8.0e-75 284.6 334 53.6
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 8.0e-75 284.6 334 53.6
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 8.0e-75 284.6 326 50.9
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 1.4e-74 283.9 327 52.3
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 2.3e-74 283.1 326 50.0
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-74 282.7 326 50.6
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 3.0e-74 282.7 326 50.6
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 7.4e-73 278.1 326 50.9
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 8.2e-72 274.6 327 50.5
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 8.2e-72 274.6 327 50.5
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 1.6e-70 270.4 334 51.5
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 5.9e-70 268.5 323 51.1
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 1.7e-69 266.9 336 50.9
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.2e-69 266.5 333 50.8
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.2e-69 266.5 333 50.8
CARHR183820 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.5e-68 263.1 314 51.0
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.6e-65 253.1 329 47.7
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 5.7e-65 251.9 401 41.4
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 8.3e-64 248.1 355 47.0
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 5.4e-63 245.4 354 46.9
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.0e-61 241.1 367 43.9
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.3e-61 240.7 324 48.1
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.7e-59 233.0 361 43.5
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 1.8e-58 230.3 355 43.4
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 5.2e-58 228.8 350 42.9
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-57 226.9 348 42.8
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 2.0e-57 226.9 348 42.8
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 1.4e-55 220.7 337 43.0
Sp6g21810 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.8e-55 220.3 117 92.3
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 4.5e-54 215.7 309 46.9
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.5e-52 210.7 319 42.3
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 5.5e-52 208.8 318 43.7
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 9.5e-52 208.0 321 40.8
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 3.6e-51 206.1 301 44.5
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 8.0e-51 204.9 374 39.0
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 8.0e-51 204.9 374 39.0
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 7.5e-49 198.4 301 42.9
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 7.5e-49 198.4 301 42.9
C03p15920 Brassica napus HOM05D004593 ORTHO05D003703 4.9e-48 195.7 216 52.8
BolC3t14022H Brassica oleracea HOM05D004593 ORTHO05D003703 4.9e-48 195.7 216 52.8
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.4e-47 194.1 295 44.1
Carub.0008s1994 Capsella rubella HOM05D004593 ORTHO05D003703 4.1e-47 192.6 360 36.7
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.0e-46 190.3 334 38.0
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 5.6e-44 182.2 293 42.0
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 5.6e-44 182.2 293 42.0
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 5.6e-44 182.2 293 42.0
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 9.5e-44 181.4 292 41.8
BcaB01g06359 Brassica carinata HOM05D004593 ORTHO05D003703 3.6e-43 179.5 117 73.5
BolC3t13768H Brassica oleracea HOM05D004593 ORTHO05D003703 1.0e-42 177.9 117 74.4
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 1.4e-42 177.6 327 37.6
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 2.3e-42 176.8 293 40.6
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 4.0e-42 176.0 295 39.3
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 8.9e-42 174.9 293 39.6
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 8.9e-42 174.9 298 38.9
C09p52000 Brassica napus HOM05D004593 ORTHO05D003703 4.4e-41 172.6 268 43.7
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 5.8e-41 172.2 325 39.7
Sp6g21310 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.3e-40 171.0 288 39.9
BcaC01g06509 Brassica carinata HOM05D004593 ORTHO05D003703 1.7e-40 170.6 301 41.5
SpUn1070_0010 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.2e-40 170.2 93 90.3
BcaB05g22576 Brassica carinata HOM05D004593 ORTHO05D003703 2.9e-40 169.9 118 74.6
CARHR285940 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.9e-40 169.9 236 45.8
BraA03t10446Z Brassica rapa HOM05D004593 ORTHO05D003703 3.7e-40 169.5 241 43.6
BraA03t10471Z Brassica rapa HOM05D004593 ORTHO05D003703 1.1e-39 167.9 279 39.8
BolC9t58062H Brassica oleracea HOM05D004593 ORTHO05D003703 1.4e-39 167.5 288 41.0
C02p12180 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-39 167.2 103 81.6
C03p13480 Brassica napus HOM05D004593 ORTHO05D003703 3.2e-39 166.4 286 38.1
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 7.0e-39 165.2 317 38.8
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 9.2e-39 164.9 325 38.5
BolC3t13805H Brassica oleracea HOM05D004593 ORTHO05D003703 1.2e-38 164.5 286 37.8
A03p11580 Brassica napus HOM05D004593 ORTHO05D003703 2.0e-38 163.7 290 39.7
A10p16850 Brassica napus HOM05D004593 ORTHO05D003703 3.5e-38 162.9 290 40.7
A09p33820 Brassica napus HOM05D004593 ORTHO05D003703 7.8e-38 161.8 119 70.6
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 2.3e-37 160.2 288 39.2
BraA10t43763Z Brassica rapa HOM05D004593 ORTHO05D003703 1.9e-36 157.1 290 39.3
C03p13530 Brassica napus HOM05D004593 ORTHO05D003703 1.6e-35 154.1 299 38.8
BolC3t13808H Brassica oleracea HOM05D004593 ORTHO05D003703 1.6e-35 154.1 299 38.1
BraA10t43762Z Brassica rapa HOM05D004593 ORTHO05D003703 3.6e-35 152.9 291 39.5
BcaB08g36242 Brassica carinata HOM05D004593 ORTHO05D003703 6.2e-35 152.1 118 67.8
A03p11600 Brassica napus HOM05D004593 ORTHO05D003703 8.1e-35 151.8 281 38.8
BcaB08g36241 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-34 151.4 290 39.0
C03p13070 Brassica napus HOM05D004593 ORTHO05D003703 1.8e-34 150.6 122 64.8
BraA03t10473Z Brassica rapa HOM05D004593 ORTHO05D003703 1.8e-34 150.6 281 38.8
Carub.0008s2528 Capsella rubella HOM05D004593 ORTHO05D003703 6.8e-34 148.7 284 36.6
Aa31LG1G11610 Aethionema arabicum HOM05D004593 ORTHO05D003703 3.4e-33 146.4 372 30.6
BcaB08g36237 Brassica carinata HOM05D004593 ORTHO05D003703 3.4e-33 146.4 276 38.8
C03p13460 Brassica napus HOM05D004593 ORTHO05D003703 4.4e-33 146.0 286 37.1
AL8G41860 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 3.7e-32 142.9 344 33.4
C09p52010 Brassica napus HOM05D004593 ORTHO05D003703 4.9e-32 142.5 288 37.5
BolC9t58063H Brassica oleracea HOM05D004593 ORTHO05D003703 4.9e-32 142.5 288 37.5
Aa31LG1G12760 Aethionema arabicum HOM05D004593 ORTHO05D003703 6.4e-32 142.1 293 36.5
BcaC04g19750 Brassica carinata HOM05D004593 ORTHO05D003703 8.3e-32 141.7 288 37.5
A10p16860 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-31 140.6 293 37.9
BraA10t43765Z Brassica rapa HOM05D004593 ORTHO05D003703 2.4e-31 140.2 293 37.2
BcaB08g36243 Brassica carinata HOM05D004593 ORTHO05D003703 1.2e-30 137.9 292 38.4
BolC3t13803H Brassica oleracea HOM05D004593 ORTHO05D003703 1.2e-30 137.9 285 35.8
CARHR118680 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.7e-30 136.7 92 73.9
BcaB05g22575 Brassica carinata HOM05D004593 ORTHO05D003703 3.9e-29 132.9 167 43.7
BcaB08g36239 Brassica carinata HOM05D004593 ORTHO05D003703 9.5e-28 128.3 258 38.4
A10p16830 Brassica napus HOM05D004593 ORTHO05D003703 3.1e-26 123.2 183 43.2
BraA10t43761Z Brassica rapa HOM05D004593 ORTHO05D003703 5.2e-26 122.5 118 58.5
C03p13510 Brassica napus HOM05D004593 ORTHO05D003703 1.2e-25 121.3 117 57.3
BolC3t13806H Brassica oleracea HOM05D004593 ORTHO05D003703 1.2e-25 121.3 117 57.3
AT1G35850 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.5e-25 120.9 304 33.9
Thhalv10005276m.g Eutrema salsugineum HOM05D004593 ORTHO05D017396 2.2e-24 117.1 240 32.9
Aa31LG2G18740 Aethionema arabicum HOM05D004593 ORTHO05D003703 1.1e-23 114.8 188 40.4
BolC5t28848H Brassica oleracea HOM05D004593 ORTHO05D017396 1.4e-23 114.4 245 31.8
C05p00590 Brassica napus HOM05D004593 ORTHO05D017396 2.4e-23 113.6 245 31.8
BraA02t05768Z Brassica rapa HOM05D004593 ORTHO05D003703 4.1e-23 112.8 86 68.6
BcaB07g32918 Brassica carinata HOM05D004593 ORTHO05D003703 7.1e-23 112.1 77 68.8
BcaC01g06511 Brassica carinata HOM05D004593 ORTHO05D003703 9.2e-23 111.7 229 35.8
AT1G01410 Arabidopsis thaliana HOM05D004593 ORTHO05D017396 1.9e-20 104.0 245 32.2
AL1G11040 Arabidopsis lyrata HOM05D004593 ORTHO05D017396 4.3e-20 102.8 246 34.1
A02p41070 Brassica napus HOM05D004593 ORTHO05D003703 2.1e-19 100.5 118 51.7
A03p54980 Brassica napus HOM05D004593 ORTHO05D003703 2.1e-19 100.5 118 51.7
CARHR278440 Cardamine hirsuta HOM05D004593 ORTHO05D017396 2.8e-19 100.1 235 32.8
Sp3g21380 Schrenkiella parvula HOM05D004593 ORTHO05D017396 3.6e-19 99.8 243 30.9
THA.LOC104818528 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.4e-18 97.8 316 27.5
BcaC01g06512 Brassica carinata HOM05D004593 ORTHO05D003703 2.4e-18 97.1 225 33.8
THA.LOC104818525 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 4.0e-18 96.3 316 27.5
THA.LOC104818526 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.5e-17 94.4 250 28.8
BcaB03g13579 Brassica carinata HOM05D004593 ORTHO05D003703 5.8e-17 92.4 125 41.6
A10p16840 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-15 87.4 199 33.7
THA.LOC104818524 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 1.9e-15 87.4 317 26.8
BraA10t43783Z Brassica rapa HOM05D004593 ORTHO05D043247 7.1e-15 85.5 62 66.1
AL3G40980 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.7e-14 83.6 61 73.8
AL54U10010 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.7e-14 83.6 61 73.8
BcaB08g36236 Brassica carinata HOM05D004593 ORTHO05D003703 3.0e-13 80.1 110 46.4
THA.LOC104811270 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.5e-12 77.0 331 25.1
THA.LOC104818529 Tarenaya hassleriana HOM05D004593 ORTHO05D003703 2.5e-12 77.0 316 25.9
BcaB08g36234 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-11 74.7 86 52.3
Manes.14G015800 Manihot esculenta HOM05D000867 ORTHO05D003703 1.6e-11 74.3 114 35.1
Carub.0003s2764 Capsella rubella HOM05D004593 ORTHO05D003703 4.0e-10 69.7 274 25.2
SGA_v2.0_scaffold7G03726 Striga asiatica HOM05D000867 ORTHO05D003703 4.0e-10 69.7 117 33.3
Thhalv10015818m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 6.9e-10 68.9 287 23.7
Potri.001G457700 Populus trichocarpa HOM05D000867 ORTHO05D003703 1.5e-09 67.8 277 23.8
QL05p068663 Quercus lobata HOM05D000867 ORTHO05D003703 2.6e-09 67.0 237 27.8
Duzib268G1610 Durio zibethinus HOM05D000867 ORTHO05D003703 4.4e-09 66.2 118 33.1
Ciclev10023507m.g Citrus clementina HOM05D000867 ORTHO05D003703 5.8e-09 65.9 112 34.8
QL05p069029 Quercus lobata HOM05D000867 ORTHO05D003703 9.9e-09 65.1 237 27.8
COL.COLO4_33640 Corchorus olitorius HOM05D000867 ORTHO05D003703 1.3e-08 64.7 299 25.4
BcaC03g13998 Brassica carinata HOM05D030066 ORTHO05D032172 1.7e-08 64.3 83 49.4
C02p12370 Brassica napus HOM05D030066 ORTHO05D032172 1.7e-08 64.3 83 49.4
BolC2t07337H Brassica oleracea HOM05D030066 ORTHO05D032172 1.7e-08 64.3 83 49.4
Ciclev10023979m.g Citrus clementina HOM05D000867 ORTHO05D003703 1.7e-08 64.3 116 31.9
Prupe.4G007700 Prunus persica HOM05D000867 ORTHO05D003703 1.7e-08 64.3 296 21.3
BolC2t07320H Brassica oleracea HOM05D004593 ORTHO05D003703 2.9e-08 63.5 34 85.3
Haze_06967 Corylus avellana HOM05D000867 ORTHO05D003703 4.9e-08 62.8 115 33.9
Atru.chr4.1454 Acer truncatum HOM05D000867 ORTHO05D003703 8.4e-08 62.0 254 25.2
C03p13520 Brassica napus HOM05D004593 ORTHO05D040362 8.4e-08 62.0 98 41.8
BolC3t13807H Brassica oleracea HOM05D004593 ORTHO05D040362 8.4e-08 62.0 98 41.8
C02p12170 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-07 60.8 96 40.6
CAN.G696.16 Capsicum annuum HOM05D000867 ORTHO05D018887 1.9e-07 60.8 97 32.0
Potri.011G144000 Populus trichocarpa HOM05D000867 ORTHO05D003703 2.4e-07 60.5 114 32.5
Ciclev10017866m.g Citrus clementina HOM05D000867 ORTHO05D003703 3.2e-07 60.1 243 25.1
COL.COLO4_20162 Corchorus olitorius HOM05D000867 ORTHO05D003703 9.3e-07 58.5 107 37.4
Gohir.D07G134350 Gossypium hirsutum HOM05D000867 ORTHO05D003703 1.6e-06 57.8 232 24.6
Cfa000077 Carpinus fangiana HOM05D000867 ORTHO05D003703 2.1e-06 57.4 245 24.9
Dinv13480 Davidia involucrata HOM05D000867 ORTHO05D000864 2.1e-06 57.4 247 23.9
Thecc.04G201100 Theobroma cacao HOM05D000867 ORTHO05D003703 2.7e-06 57.0 115 32.2
DCAR_004892 Daucus carota HOM05D000867 ORTHO05D003703 3.5e-06 56.6 73 42.5
Dinv32070 Davidia involucrata HOM05D000867 ORTHO05D003703 4.6e-06 56.2 117 30.8
Duzib151G0751 Durio zibethinus HOM05D000867 ORTHO05D003703 4.6e-06 56.2 118 29.7
Gohir.A07G130066 Gossypium hirsutum HOM05D000867 ORTHO05D003703 6.0e-06 55.8 116 32.8
Rhsim05G0089100 Rhododendron simsii HOM05D000867 ORTHO05D000864 7.9e-06 55.5 220 23.2
Rhsim12G0107700 Rhododendron simsii HOM05D000867 ORTHO05D000864 7.9e-06 55.5 220 23.2


User provided reference genes

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