Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g11330 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.4e-98 362.8 172 100.0
Sp7g06900 Schrenkiella parvula HOM05D004976 ORTHO05D004851 4.9e-59 231.5 118 93.2
Sp5g16840 Schrenkiella parvula HOM05D004976 ORTHO05D004851 5.3e-37 158.3 110 65.5
AT2G33160 Arabidopsis thaliana HOM05D000037 ORTHO05D000150 1.7e-22 110.2 94 48.9
AT2G46460 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.8e-21 106.7 95 52.6
Sp1g19240 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.6e-20 102.8 99 42.4
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.4e-20 102.4 94 45.7
AT2G04420 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.8e-19 99.0 94 44.7
AT1G27870 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.4e-18 97.1 94 43.6
C05p50100 Brassica napus HOM05D004976 ORTHO05D004851 2.5e-18 96.3 87 46.0
BraA01t02778Z Brassica rapa HOM05D004976 ORTHO05D004851 2.5e-18 96.3 87 46.0
CARHR043800 Cardamine hirsuta HOM05D004976 ORTHO05D004851 1.2e-17 94.0 95 42.1
BolC5t29232H Brassica oleracea HOM05D004976 ORTHO05D004851 1.6e-17 93.6 95 44.2
BolC8t48401H Brassica oleracea HOM05D004976 ORTHO05D004851 1.6e-17 93.6 87 44.8
BraA02t07436Z Brassica rapa HOM05D004976 ORTHO05D004851 4.7e-17 92.0 121 37.2
BraA07t29876Z Brassica rapa HOM05D004976 ORTHO05D004851 4.7e-17 92.0 115 40.0
BolC7t43279H Brassica oleracea HOM05D004976 ORTHO05D004851 6.1e-17 91.7 84 45.2
C02p26690 Brassica napus HOM05D004976 ORTHO05D004851 7.9e-17 91.3 95 45.3
BolC9t55739H Brassica oleracea HOM05D004976 ORTHO05D004851 7.9e-17 91.3 102 41.2
A10p08070 Brassica napus HOM05D004976 ORTHO05D004851 1.4e-16 90.5 121 36.4
A09p37980 Brassica napus HOM05D004976 ORTHO05D004851 2.3e-16 89.7 121 36.4
BolC1t02896H Brassica oleracea HOM05D004976 ORTHO05D004851 2.3e-16 89.7 95 44.2
Thhalv10009902m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.3e-16 89.7 88 46.6
BraA06t23723Z Brassica rapa HOM05D004976 ORTHO05D004851 3.0e-16 89.4 95 44.2
AL8G15920 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 1.1e-15 87.4 97 44.3
BolC2t08499H Brassica oleracea HOM05D004976 ORTHO05D004851 2.6e-15 86.3 94 38.3
AT1G47497 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.3e-15 85.9 74 52.7
BcaB01g00479 Brassica carinata HOM05D000003 ORTHO05D004851 5.7e-15 85.1 90 41.1
BraA09t38437Z Brassica rapa HOM05D004976 ORTHO05D004851 7.4e-15 84.7 94 41.5
Carub.0004s1022 Capsella rubella HOM05D004976 ORTHO05D004851 7.4e-15 84.7 96 45.8
AL3G23800 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 1.7e-14 83.6 73 50.7
BcaC06g30787 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-14 83.6 108 38.0
Sp4g00970 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.7e-14 83.6 56 69.6
BolC9t59872H Brassica oleracea HOM05D001406 ORTHO05D002467 2.2e-14 83.2 95 36.8
Thhalv10022287m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.8e-14 82.8 92 44.6
BraA09t38717Z Brassica rapa HOM05D004976 ORTHO05D004851 4.8e-14 82.0 107 35.5
A02p28410 Brassica napus HOM05D004976 ORTHO05D004851 1.4e-13 80.5 95 41.1
BraA08t35107Z Brassica rapa HOM05D004976 ORTHO05D004851 1.4e-13 80.5 81 42.0
Aa31LG9G3130 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-13 79.3 97 37.1
BraA03t14020Z Brassica rapa HOM05D004976 ORTHO05D004851 4.1e-13 79.0 105 37.1
BolC8t51211H Brassica oleracea HOM05D004976 ORTHO05D004851 5.3e-13 78.6 94 36.2
Thhalv10019506m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.2e-12 77.4 70 52.9
BcaC07g40765 Brassica carinata HOM05D000003 ORTHO05D000004 2.0e-12 76.6 98 39.8
C09p05940 Brassica napus HOM05D004976 ORTHO05D004851 4.5e-12 75.5 95 44.2
BolC9t53519H Brassica oleracea HOM05D004976 ORTHO05D004851 4.5e-12 75.5 95 44.2
BcaB06g27196 Brassica carinata HOM05D000003 ORTHO05D000004 2.2e-11 73.2 94 39.4
BcaB08g35528 Brassica carinata HOM05D004976 ORTHO05D004851 2.9e-11 72.8 95 40.0
BcaC05g28671 Brassica carinata HOM05D000003 ORTHO05D004851 2.9e-11 72.8 92 38.0
C05p41910 Brassica napus HOM05D004976 ORTHO05D004851 3.8e-11 72.4 101 38.6
Aa31LG1G4960 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-11 72.0 97 32.0
Aa31LG9G1700 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-11 71.2 96 33.3
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 1.1e-10 70.9 89 33.7
BcaB04g17741 Brassica carinata HOM05D000003 ORTHO05D004851 1.1e-10 70.9 89 38.2
Thhalv10003059m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.1e-10 70.9 103 35.0
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-10 70.5 104 35.6
BcaB05g22432 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-10 70.1 85 37.6
BolC5t33522H Brassica oleracea HOM05D004976 ORTHO05D004851 1.9e-10 70.1 83 41.0
CARHR146840 Cardamine hirsuta HOM05D004976 ORTHO05D004851 2.5e-10 69.7 93 34.4
BolC5t31734H Brassica oleracea HOM05D004976 ORTHO05D004851 3.2e-10 69.3 74 43.2
BolC9t56783H Brassica oleracea HOM05D004976 ORTHO05D004851 3.2e-10 69.3 75 41.3
Thhalv10002256m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 3.2e-10 69.3 101 31.7
Aa31LG8G10880 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-10 68.9 95 33.7
A06p33810 Brassica napus HOM05D004976 ORTHO05D004851 4.2e-10 68.9 96 37.5
BolC6t38560H Brassica oleracea HOM05D004976 ORTHO05D004851 4.2e-10 68.9 74 43.2
Aa31LG8G11710 Aethionema arabicum HOM05D004976 ORTHO05D004851 5.5e-10 68.6 93 35.5
AT5G26617 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 5.5e-10 68.6 90 35.6
Aa31LG2G16130 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-10 68.2 106 32.1
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 7.2e-10 68.2 110 32.7
BcaC03g16450 Brassica carinata HOM05D000003 ORTHO05D004851 7.2e-10 68.2 90 40.0
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-09 67.0 87 39.1
Aa31LG9G1250 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-09 66.6 104 32.7
AT2G13980 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 2.1e-09 66.6 95 32.6
Sp3g33160 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.1e-09 66.6 104 31.7
BcaC09g49873 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-09 66.2 82 37.8
SpUn0001_0110 Schrenkiella parvula HOM05D000003 ORTHO05D004851 2.7e-09 66.2 97 35.1
Aa31sc214G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.6e-09 65.9 88 35.2
BcaB07g31659 Brassica carinata HOM05D000003 ORTHO05D000004 3.6e-09 65.9 83 41.0
AT3G32130 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 4.7e-09 65.5 106 33.0
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-08 64.3 110 33.6
AL1G41300 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 1.0e-08 64.3 93 35.5
C08p27020 Brassica napus HOM05D004976 ORTHO05D004851 1.4e-08 63.9 69 42.0
BolC7t41689H Brassica oleracea HOM05D004976 ORTHO05D004851 1.4e-08 63.9 61 44.3
Thhalv10002811m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.4e-08 63.9 85 34.1
Sp4g06100 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.4e-08 63.9 95 33.7
Sp7g07570 Schrenkiella parvula HOM05D004976 ORTHO05D004851 3.0e-08 62.8 80 41.2
AT1G27220 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 5.2e-08 62.0 44 59.1
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 8.8e-08 61.2 80 37.5
Aa31LG7G13940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-07 60.8 83 34.9
AL3G31830 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 1.5e-07 60.5 95 37.9
Sp6g05670 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.0e-07 60.1 93 35.5
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-07 59.7 89 36.0
AT5G65005 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.3e-07 59.3 105 32.4
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-07 58.9 87 37.9
Lsat_1_v5_gn_4_58600 Lactuca sativa HOM05D000774 ORTHO05D000602 5.7e-07 58.5 93 35.5
Aa31sc320G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.4e-07 58.2 92 32.6
AT3G23320 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 9.7e-07 57.8 93 34.4
Os02g0630250 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 9.7e-07 57.8 107 29.9
AT4G09775 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.3e-06 57.4 80 36.2
BcaC02g10407 Brassica carinata HOM05D004976 ORTHO05D004851 1.3e-06 57.4 87 32.2
MELO3C002549.2 Cucumis melo HOM05D000155 ORTHO05D000022 1.7e-06 57.0 93 37.6
BraA01t00584Z Brassica rapa HOM05D004976 ORTHO05D004851 2.8e-06 56.2 62 45.2
CARHR123710 Cardamine hirsuta HOM05D004976 ORTHO05D004851 2.8e-06 56.2 51 49.0
BcaC01g03112 Brassica carinata HOM05D000003 ORTHO05D004851 3.7e-06 55.8 88 34.1
Sp2g04360 Schrenkiella parvula HOM05D004976 ORTHO05D004851 3.7e-06 55.8 141 27.7
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 55.5 89 33.7
Aa31sc248G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 55.5 89 33.7
BolC2t08873H Brassica oleracea HOM05D004976 ORTHO05D004851 4.8e-06 55.5 45 51.1
BraA07t29664Z Brassica rapa HOM05D004976 ORTHO05D004851 6.3e-06 55.1 70 38.6
Sp4g04930 Schrenkiella parvula HOM05D000003 ORTHO05D004851 6.3e-06 55.1 104 32.7


User provided reference genes

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