Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 1.2e-283 979.2 483 100.0
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.6e-259 898.3 483 90.5
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 8.4e-258 893.3 485 90.1
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 1.2e-256 889.4 485 89.9
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 1.1e-249 866.3 483 87.2
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 5.5e-249 864.0 483 86.7
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 3.6e-248 861.3 483 86.7
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 2.3e-247 858.6 484 87.0
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 5.1e-247 857.4 483 86.5
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 1.3e-245 852.8 485 86.8
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 1.3e-245 852.8 485 86.8
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 2.0e-227 792.3 485 79.2
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 2.7e-187 659.1 479 66.2
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.4e-183 646.7 486 64.2
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 6.8e-183 644.4 483 62.9
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 8.9e-183 644.0 482 66.0
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.5e-182 643.3 486 64.4
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 2.6e-182 642.5 483 66.3
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.7e-181 639.8 483 65.6
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 4.1e-180 635.2 483 62.1
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 9.2e-180 634.0 486 64.2
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 9.2e-180 634.0 482 64.1
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 2.1e-179 632.9 486 63.6
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.1e-179 632.9 483 65.0
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.7e-179 632.5 486 65.0
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 6.0e-179 631.3 487 64.9
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 6.6e-178 627.9 488 64.3
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 8.6e-178 627.5 488 63.5
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 1.1e-177 627.1 488 63.9
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 1.5e-177 626.7 487 61.8
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 2.5e-177 625.9 493 62.9
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 3.3e-177 625.5 484 63.6
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 4.3e-177 625.2 492 63.2
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 5.6e-177 624.8 483 61.9
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 5.6e-177 624.8 483 62.1
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.8e-176 622.5 483 62.3
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.7e-176 621.7 487 63.9
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 6.2e-176 621.3 489 62.6
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 1.1e-175 620.5 483 61.5
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.4e-175 620.2 493 61.9
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.4e-175 619.4 483 62.5
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 2.4e-175 619.4 483 62.3
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 3.1e-175 619.0 498 61.6
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 4.0e-175 618.6 483 61.3
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 1.2e-174 617.1 486 63.2
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 5.8e-174 614.8 481 61.5
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 7.6e-174 614.4 487 63.2
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.3e-173 613.6 483 61.3
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 4.9e-173 611.7 482 63.5
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.4e-172 609.4 485 61.4
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 4.2e-172 608.6 486 61.1
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 5.4e-172 608.2 492 60.8
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 5.4e-172 608.2 464 64.9
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 3.5e-171 605.5 486 61.9
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 4.6e-171 605.1 490 62.7
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.3e-170 603.6 480 60.8
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 8.7e-170 600.9 489 61.3
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.1e-169 600.5 480 61.0
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 5.6e-169 598.2 481 60.5
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 5.6e-169 598.2 483 61.1
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 1.2e-168 597.0 486 62.1
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.4e-167 593.6 483 60.2
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 1.8e-167 593.2 502 61.0
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 3.1e-167 592.4 486 61.3
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 5.2e-167 591.7 484 58.9
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.2e-166 590.5 485 60.0
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 4.4e-166 588.6 484 59.3
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 5.8e-166 588.2 448 63.4
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 5.8e-166 588.2 484 60.3
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 8.4e-165 584.3 484 59.3
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 2.1e-163 579.7 483 59.4
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 6.0e-163 578.2 482 58.9
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 3.4e-158 562.4 482 57.9
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 9.9e-158 560.8 486 58.4
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 1.9e-153 546.6 502 57.0
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.8e-151 540.0 483 57.1
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 2.4e-151 539.7 500 54.4
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 3.1e-151 539.3 486 57.6
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 3.8e-149 532.3 447 59.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 4.2e-148 528.9 430 59.1
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 2.5e-145 519.6 488 55.3
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.3e-141 507.3 375 64.3
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.1e-138 495.4 274 88.7
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.6e-136 490.3 385 59.0
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.7e-133 480.3 468 51.1
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 4.2e-132 475.7 273 86.4
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 2.1e-131 473.4 383 62.7
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 5.1e-130 468.8 320 70.0
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.6e-126 456.4 339 64.0
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 3.6e-123 446.0 317 65.6
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.1e-121 441.0 457 48.1
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.3e-112 411.0 492 42.7
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 5.0e-109 399.1 218 87.6
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 4.2e-108 396.0 441 47.2
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 9.8e-97 358.2 406 45.1
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 3.7e-96 356.3 444 45.3
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 2.7e-94 350.1 236 77.1
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.5e-94 349.7 256 64.8
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 9.5e-92 341.7 393 43.8
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.4e-90 337.8 361 49.3
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.0e-85 321.6 270 60.7
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 6.6e-85 318.9 398 43.0
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.5e-84 317.8 461 41.4
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.9e-84 317.4 300 54.3
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 7.5e-81 305.4 240 58.3
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.9e-80 303.5 320 52.5
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 8.9e-66 255.4 204 66.2
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.0e-65 254.2 251 53.0
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 4.9e-56 223.0 179 59.2
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 5.4e-47 193.0 128 71.9
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 7.1e-47 192.6 128 72.7
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 1.6e-46 191.4 196 52.6
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 2.1e-38 164.5 116 71.6
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 1.4e-26 125.2 108 60.2
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 5.8e-25 119.8 100 53.0
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 2.9e-24 117.5 116 50.9
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 3.1e-18 97.4 53 88.7
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 3.1e-18 97.4 53 88.7
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 2.6e-09 67.8 33 93.9
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 2.5e-07 61.2 44 59.1
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 5.5e-07 60.1 68 48.5
MD06G1157100 Malus domestica HOM05D006543 ORTHO05D008308 1.6e-06 58.5 71 46.5
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 7.9e-06 56.2 68 47.1


User provided reference genes

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