Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g018100 Solanum pennellii HOM05D007322 ORTHO05D009029 5.8e-214 748.0 643 100.0
Solyc11g040260.2 Solanum lycopersicum HOM05D007322 ORTHO05D009029 6.5e-213 744.6 643 99.8
CAN.G1021.1 Capsicum annuum HOM05D007322 ORTHO05D009029 5.9e-158 562.0 644 82.0
GSVIVG01022920001 Vitis vinifera HOM05D007322 ORTHO05D009029 6.2e-115 419.1 580 75.5
Dinv24285 Davidia involucrata HOM05D007322 ORTHO05D009029 2.4e-114 417.2 587 71.0
TWI14G1121 Tripterygium wilfordii HOM05D007322 ORTHO05D009029 4.2e-111 406.4 584 73.1
CSS0017191 Camellia sinensis var. sinensis HOM05D007322 ORTHO05D009029 9.3e-111 405.2 584 70.9
Cc02_g22530 Coffea canephora HOM05D007322 ORTHO05D009029 3.0e-109 400.2 580 74.0
Sed0025924 Sechium edule HOM05D007322 ORTHO05D009029 5.3e-106 389.4 584 72.4
Hma1.2p1_0217F.1_g092060 Hydrangea macrophylla HOM05D007322 ORTHO05D009029 9.0e-106 388.7 587 68.5
Migut.B00834 Erythranthe guttata HOM05D007322 ORTHO05D009029 1.5e-105 387.9 591 70.4
CsaV3_3G043150 Cucumis sativus L. HOM05D007322 ORTHO05D009029 9.9e-105 385.2 584 70.0
Prupe.1G569600 Prunus persica HOM05D007322 ORTHO05D009029 1.7e-104 384.4 639 66.4
RcHm_v2.0_Chr7g0222211 Rosa chinensis HOM05D007322 ORTHO05D009029 8.4e-104 382.1 580 70.2
MELO3C026617.2 Cucumis melo HOM05D007322 ORTHO05D009029 2.4e-103 380.6 584 69.5
CiPaw.05G044700 Carya illinoinensis HOM05D007322 ORTHO05D009029 4.2e-103 379.8 556 75.5
Potri.003G019000 Populus trichocarpa HOM05D007322 ORTHO05D009029 9.3e-103 378.6 580 70.5
Cfa005519 Carpinus fangiana HOM05D007322 ORTHO05D009029 7.9e-102 375.6 584 71.2
Lsat_1_v5_gn_5_105200 Lactuca sativa HOM05D007322 ORTHO05D009029 7.9e-102 375.6 584 70.0
MD15G1423900 Malus domestica HOM05D007322 ORTHO05D009029 3.0e-101 373.6 580 69.0
Sabra03G0010600 Salix brachista HOM05D007322 ORTHO05D009029 6.7e-101 372.5 589 69.8
Duzib132G0092 Durio zibethinus HOM05D007322 ORTHO05D009029 1.1e-100 371.7 584 67.5
Nn5g28260 Nelumbo nucifera HOM05D007322 ORTHO05D009029 1.5e-100 371.3 599 76.5
Rhsim01G0008000 Rhododendron simsii HOM05D007322 ORTHO05D009029 2.5e-100 370.5 593 70.7
FvH4_5g29340 Fragaria vesca HOM05D007322 ORTHO05D009029 9.6e-100 368.6 580 70.3
Thecc.02G087000 Theobroma cacao HOM05D007322 ORTHO05D009029 3.7e-99 366.7 644 68.0
Potri.001G211300 Populus trichocarpa HOM05D007322 ORTHO05D009029 6.2e-99 365.9 584 68.8
CARHR011130 Cardamine hirsuta HOM05D007322 ORTHO05D009029 1.4e-98 364.8 581 68.7
HanXRQChr10g0290611 Helianthus annuus HOM05D007322 ORTHO05D009029 2.4e-98 364.0 591 66.3
Thhalv10007006m.g Eutrema salsugineum HOM05D007322 ORTHO05D009029 3.1e-98 363.6 581 67.6
FAN18G2556 Fragaria x ananassa HOM05D007322 ORTHO05D009029 3.1e-98 363.6 580 70.3
Ciclev10000525m.g Citrus clementina HOM05D007322 ORTHO05D009029 6.9e-98 362.5 580 71.2
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 1.5e-97 361.3 575 69.4
THA.LOC104816934 Tarenaya hassleriana HOM05D007322 ORTHO05D009029 2.6e-97 360.5 580 68.1
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 3.4e-97 360.1 594 63.3
Carub.0001s1049 Capsella rubella HOM05D007322 ORTHO05D009029 1.7e-96 357.8 581 69.0
AT1G10910 Arabidopsis thaliana HOM05D007322 ORTHO05D009029 2.2e-96 357.5 581 67.8
TAR381G0036 Trochodendron aralioides HOM05D007322 ORTHO05D009029 2.2e-96 357.5 658 68.8
Gorai.005G242500 Gossypium raimondii HOM05D007322 ORTHO05D009029 6.5e-96 355.9 598 68.6
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 1.9e-95 354.4 594 63.0
Gohir.A03G193600 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.5e-95 354.0 580 69.5
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 5.5e-95 352.8 581 63.5
Aqoxy6G00206 Aquilegia oxysepala HOM05D007322 ORTHO05D009029 9.3e-95 352.1 585 72.0
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 9.3e-95 352.1 594 62.8
A06p07690 Brassica napus HOM05D007322 ORTHO05D009029 9.3e-95 352.1 594 64.5
QL10p025368 Quercus lobata HOM05D007322 ORTHO05D009029 9.3e-95 352.1 695 46.0
C05p09280 Brassica napus HOM05D007322 ORTHO05D009029 2.7e-94 350.5 594 64.5
COL.COLO4_11791 Corchorus olitorius HOM05D007322 ORTHO05D009029 2.7e-94 350.5 639 64.6
Gohir.D02G214700 Gossypium hirsutum HOM05D007322 ORTHO05D009029 2.7e-94 350.5 598 67.7
BolC5t29668H Brassica oleracea HOM05D007322 ORTHO05D009029 6.0e-94 349.4 581 65.4
Glyma.08G186600 Glycine max HOM05D007322 ORTHO05D009029 1.3e-93 348.2 581 65.2
Lj9C305T7 Lonicera japonica HOM05D007322 ORTHO05D009029 5.7e-92 342.8 640 55.2
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 1.1e-90 338.6 584 67.3
Nitab4.5_0003788g0020 Nicotiana tabacum HOM05D007322 ORTHO05D009029 5.3e-90 336.3 192 86.5
Lalb_Chr20g0123451 Lupinus albus HOM05D007322 ORTHO05D009029 1.5e-89 334.7 569 69.4
Lj6g0009763 Lotus japonicus HOM05D007322 ORTHO05D009029 5.9e-89 332.8 600 63.5
MBI04_g34119_MAGBIO Magnolia biondii HOM05D007322 ORTHO05D009029 2.2e-88 330.9 581 68.2
Atru.chr6.627 Acer truncatum HOM05D007322 ORTHO05D009029 2.9e-88 330.5 528 70.6
Nitab4.5_0000001g0160 Nicotiana tabacum HOM05D007322 ORTHO05D009029 6.5e-88 329.3 215 79.1
Psat1g220200 Pisum sativum HOM05D007322 ORTHO05D009029 8.4e-88 328.9 619 61.7
Manes.07G016500 Manihot esculenta HOM05D007322 ORTHO05D009029 1.1e-87 328.6 528 71.8
Aa31LG1G3950 Aethionema arabicum HOM05D007322 ORTHO05D009029 1.9e-87 327.8 639 63.5
EL10Ac6g14069 Beta vulgaris HOM05D007322 ORTHO05D009029 2.1e-86 324.3 599 65.8
TPR.G2112 Trifolium pratense HOM05D007322 ORTHO05D009029 1.1e-84 318.5 591 68.4
ATR0026G013 Amborella trichopoda HOM05D007322 ORTHO05D009029 9.7e-84 315.5 592 70.3
vmacro19889 Vaccinium macrocarpon HOM05D007322 ORTHO05D009029 2.2e-83 314.3 563 68.2
SGA_v2.0_scaffold110G31316 Striga asiatica HOM05D007322 ORTHO05D009029 1.4e-82 311.6 637 68.9
AL1G21890 Arabidopsis lyrata HOM05D007322 ORTHO05D009029 2.0e-81 307.8 529 69.6
Ah.03g137110 Amaranthus hybridus HOM05D007322 ORTHO05D009029 1.6e-78 298.1 582 68.7
Zm00001eb162220 Zea mays HOM05D007322 ORTHO05D009029 2.1e-78 297.7 587 70.5
Phvul.006G214900 Phaseolus vulgaris HOM05D007322 ORTHO05D009029 6.1e-78 296.2 544 68.4
MSTRG.20302 Avicennia marina HOM05D007322 ORTHO05D009029 1.8e-77 294.7 616 69.2
Peaxi162Scf00152g01437 Petunia axillaris HOM05D007322 ORTHO05D009029 5.1e-77 293.1 169 85.8
Haze_01685 Corylus avellana HOM05D007322 ORTHO05D009029 1.5e-76 291.6 192 75.0
VMungo0540G0689 Vigna mungo HOM05D007322 ORTHO05D009029 9.7e-76 288.9 576 67.5
Os01g0559500 Oryza sativa ssp. japonica HOM05D007322 ORTHO05D009029 1.7e-75 288.1 574 71.1
ClCG10G013500 Citrullus lanatus HOM05D007322 ORTHO05D009029 6.9e-74 282.7 192 72.9
DCAR_025358 Daucus carota HOM05D007322 ORTHO05D009029 1.5e-73 281.6 192 70.8
arahy.Tifrunner.gnm1.ann1.YY4I9I Arachis hypogaea HOM05D007322 ORTHO05D009029 1.7e-72 278.1 591 61.6
Eucgr.G00576 Eucalyptus grandis HOM05D007322 ORTHO05D009029 2.1e-70 271.2 192 69.8
HPP92_009152 Vanilla planifolia HOM05D007322 ORTHO05D009029 3.6e-70 270.4 638 51.7
arahy.Tifrunner.gnm1.ann1.BYDN2S Arachis hypogaea HOM05D007322 ORTHO05D009029 3.0e-69 267.3 591 61.3
FAN08G0261 Fragaria x ananassa HOM05D007322 ORTHO05D009029 4.4e-68 263.5 192 67.2
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 6.5e-64 249.6 566 39.6
Nitab4.5_0000001g0170 Nicotiana tabacum HOM05D007322 ORTHO05D009029 2.2e-59 234.6 257 65.4
Peaxi162Scf00152g01436 Petunia axillaris HOM05D007322 ORTHO05D009029 1.6e-57 228.4 260 63.8
Sc06g0002720 Simmondsia chinensis HOM05D007322 ORTHO05D009029 8.5e-56 222.6 176 63.1
Oeu008898.1 Olea europaea HOM05D007322 ORTHO05D009029 1.1e-47 195.7 202 62.9
Nitab4.5_0003788g0010 Nicotiana tabacum HOM05D007322 ORTHO05D009029 3.4e-44 184.1 143 85.3
FAN04G1727 Fragaria x ananassa HOM05D001260 ORTHO05D002424 4.4e-44 183.7 191 62.8
ECA234G4037 Erigeron canadensis HOM05D007322 ORTHO05D009029 7.5e-44 183.0 528 63.4
CDE05G1655 Ceratophyllum demersum HOM05D007322 ORTHO05D009029 5.6e-39 166.8 208 41.8
Haze_01695 Corylus avellana HOM05D004517 ORTHO05D005366 4.1e-34 150.6 124 64.5
Cpa.g.sc113.59 Carica papaya HOM05D007322 ORTHO05D009029 1.2e-30 139.0 107 62.6
PGSC0003DMG400008423 Solanum tuberosum HOM05D007322 ORTHO05D009029 1.2e-28 132.5 67 97.0
DCAR_025359 Daucus carota HOM05D007322 ORTHO05D009029 6.4e-27 126.7 139 65.5
Cpa.g.c42393 Carica papaya HOM05D007322 ORTHO05D009029 7.1e-18 96.7 93 52.7
Pp3c24_4430 Physcomitrium patens HOM05D007322 ORTHO05D009029 1.8e-13 82.0 129 34.1
Actinidia26149 Actinidia chinensis HOM05D007322 ORTHO05D009029 9.2e-10 69.7 85 70.6
SEGI_28259 Sequoiadendron giganteum HOM05D005775 ORTHO05D000023 3.0e-08 64.7 134 27.6
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 6.6e-08 63.5 137 26.3
Oeu027802.1 Olea europaea HOM05D007322 ORTHO05D009029 5.6e-07 60.5 80 46.2
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 8.1e-06 56.6 123 28.5


User provided reference genes

Program Settings