Gene: Zm00001eb162220

General Information

Structural Information

Species Zea mays
Gene Identifier Zm00001eb162220
Transcript Identifier Zm00001eb162220_T001
Gene Type Coding gene
Location 3 : 231534834-231555355 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D007322
#Genes/#Species 106/85
Phylogenetic origin

ID ORTHO05D009029
#Genes/#Species 110/85
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Zm00001eb162220_T001
pid Zm00001eb162220_P001
uniprot A0A1D6NMH7
uniprot A0A1D6NMI6
uniprot A0A1D6NMI5
uniprot A0A1D6NMI3
uniprot A0A3L6FGP8
entrez 103651615
refseq XM_008677279.1
refseq XP_008675502.1
refseq XP_008675501.1
refseq XM_008677280.1
refseq XP_008675503.1
refseq XM_008677281.1
V4_identifier Zm00001d044496

Descriptions

Short descriptions
Ortholog descriptions

Description Zm00001e020710
Description Pentatricopeptide repeat-containing protein chloroplastic

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT1G10910
GO:0009658	ISO	PLAZA Integrative Orthology	chloroplast organization	AT1G10910

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G10910

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IEA	GOA Database	membrane
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G10910

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.60	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (PDM2)