Gene: Sopen11g018100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g018100
  • Transcript Identifier Sopen11g018100.2
  • Gene Type Coding gene
  • Location Spenn-ch11 : 40321738-40351374 : positive

Gene Family Information

  • ID HOM05D007322
  • #Genes/#Species 106/85
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g018100.2

Descriptions

  • Description Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT1G10910
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G10910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G10910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G10910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
16.11.3.3.4.60 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (PDM2)