Gene: Thecc.02G087000

General Information

Structural Information

Species Theobroma cacao
Gene Identifier Thecc.02G087000
Transcript Identifier Thecc.02G087000.1
Gene Type Coding gene
Location Chromosome_2 : 4501613-4505581 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D007322
#Genes/#Species 106/85
Phylogenetic origin

ID ORTHO05D009029
#Genes/#Species 110/85
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Thecc.02G087000.v2.1
pacid 42031641
ancestorIdentifier Thecc1EG006909.CGDv1.1
ancestorIdentifier Thecc1EG006909t2.CGDv1.1

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat superfamily protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT1G10910
GO:0009658	ISO	PLAZA Integrative Orthology	chloroplast organization	AT1G10910

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G10910

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G10910

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.60	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (PDM2)