Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g013000 Solanum pennellii HOM05D001734 ORTHO05D003483 1.1e-36 156.0 75 100.0
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 5.3e-34 147.1 69 100.0
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 5.3e-34 147.1 69 100.0
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 2.0e-33 145.2 69 98.6
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 1.3e-32 142.5 69 95.7
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 1.7e-32 142.1 69 97.1
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.5e-32 140.2 69 95.7
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 9.4e-31 136.3 69 89.9
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.2e-30 136.0 69 88.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.6e-30 135.6 69 87.0
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.0e-29 132.9 69 85.5
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.8e-29 132.1 69 85.5
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 3.0e-29 131.3 69 87.0
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 87.0
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 87.0
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 87.0
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 87.0
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 84.1
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 3.9e-29 131.0 69 87.0
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 5.1e-29 130.6 69 87.0
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 6.7e-29 130.2 69 84.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.1e-28 129.4 69 85.5
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.1e-28 129.4 69 84.1
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.5e-28 129.0 69 85.5
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 1.5e-28 129.0 68 86.8
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.5e-28 129.0 69 87.0
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.5e-28 129.0 69 88.4
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.5e-28 129.0 69 87.0
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.0e-28 128.6 69 82.6
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 2.0e-28 128.6 69 87.0
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 2.0e-28 128.6 69 87.0
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 2.0e-28 128.6 69 87.0
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.0e-28 128.6 69 84.1
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.6e-28 128.3 69 85.5
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 2.6e-28 128.3 69 82.6
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 3.3e-28 127.9 69 85.5
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 3.3e-28 127.9 69 85.5
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.3e-28 127.9 69 85.5
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 82.6
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 85.5
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 87.0
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 87.0
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 84.1
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 82.6
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 81.2
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 87.0
VMungo1309G0781 Vigna mungo HOM05D001734 ORTHO05D003483 4.4e-28 127.5 69 88.4
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 5.7e-28 127.1 69 82.6
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 5.7e-28 127.1 72 80.6
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 7.4e-28 126.7 69 85.5
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.4e-28 126.7 69 85.5
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.4e-28 126.7 69 85.5
MBI10_g06739_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 7.4e-28 126.7 69 84.1
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.4e-28 126.7 69 84.1
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 7.4e-28 126.7 68 86.8
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 9.7e-28 126.3 69 81.2
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 9.7e-28 126.3 69 84.1
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 9.7e-28 126.3 69 82.6
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 1.3e-27 125.9 69 85.5
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.3e-27 125.9 69 84.1
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.3e-27 125.9 69 87.0
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 2.2e-27 125.2 69 84.1
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 2.2e-27 125.2 69 81.2
SEGI_19461 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 2.2e-27 125.2 72 80.6
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 2.2e-27 125.2 69 84.1
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 2.8e-27 124.8 69 82.6
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.8e-27 124.8 69 81.2
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.8e-27 124.8 69 81.2
Ah.11g051590 Amaranthus hybridus HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 81.2
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 81.2
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 81.2
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 81.2
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 81.2
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.8e-27 124.0 69 79.7
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 6.3e-27 123.6 69 81.2
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 6.3e-27 123.6 69 82.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 6.3e-27 123.6 69 84.1
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 6.3e-27 123.6 69 79.7
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 8.2e-27 123.2 69 82.6
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 8.2e-27 123.2 69 84.1
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 84.1
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 84.1
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 84.1
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 79.7
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 84.1
TPR.G18423 Trifolium pratense HOM05D001734 ORTHO05D003483 1.1e-26 122.9 69 84.1
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.4e-26 122.5 69 81.2
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 1.4e-26 122.5 69 84.1
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.8e-26 122.1 69 79.7
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.8e-26 122.1 69 79.7
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.8e-26 122.1 69 79.7
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.4e-26 121.7 69 84.1
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 4.1e-26 120.9 71 76.1
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 2.0e-25 118.6 69 76.8
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 2.9e-24 114.8 69 72.5
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 1.9e-23 112.1 69 69.6
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 1.5e-20 102.4 69 66.7
CARHR162380 Cardamine hirsuta HOM05D001734 ORTHO05D003483 5.3e-18 94.0 51 80.4
SGA_v2.0_scaffold990G53774 Striga asiatica HOM05D001734 ORTHO05D003483 5.2e-13 77.4 38 89.5
PRCOL_00001368 Prasinoderma coloniale HOM05D001734 ORTHO05D003483 3.2e-07 58.2 74 45.9


User provided reference genes

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