Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 9.8e-199 696.8 410 100.0
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 1.0e-195 686.8 410 98.3
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 5.4e-165 584.7 414 79.2
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 2.8e-137 492.7 415 70.8
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 4.8e-137 491.9 415 73.5
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 7.2e-109 398.3 416 61.5
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 1.2e-76 291.2 417 50.8
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.3e-70 271.2 429 47.1
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 1.7e-70 270.8 421 43.0
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.9e-69 267.3 432 46.3
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 3.6e-68 263.1 389 42.4
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 6.2e-68 262.3 389 42.4
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 1.9e-64 250.8 414 43.0
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 7.1e-64 248.8 401 44.9
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 2.7e-63 246.9 425 46.8
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 3.5e-63 246.5 412 41.5
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 1.3e-62 244.6 310 45.8
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 1.7e-62 244.2 430 40.9
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 1.1e-61 241.5 309 50.2
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 2.1e-60 237.3 484 41.7
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 2.8e-60 236.9 325 44.6
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 3.1e-59 233.4 404 38.9
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 2.0e-58 230.7 330 43.3
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 9.3e-56 221.9 417 41.2
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 1.6e-55 221.1 405 41.2
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 2.1e-55 220.7 235 53.2
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 4.6e-55 219.5 337 41.8
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 1.0e-54 218.4 323 42.1
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 1.7e-54 217.6 385 40.0
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 5.1e-54 216.1 315 44.1
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 1.5e-53 214.5 304 45.4
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 4.3e-53 213.0 295 46.4
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 5.6e-53 212.6 326 42.6
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 5.6e-53 212.6 331 42.0
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 7.3e-53 212.2 405 38.5
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 1.3e-52 211.5 319 42.9
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 3.6e-52 209.9 424 37.7
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 3.6e-52 209.9 323 43.0
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 6.2e-52 209.1 334 38.3
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 6.2e-52 209.1 384 38.3
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 3.1e-51 206.8 327 41.0
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 4.0e-51 206.5 314 42.7
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 4.0e-51 206.5 314 40.4
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 6.9e-51 205.7 420 39.5
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 6.9e-51 205.7 331 41.4
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.5e-50 204.5 163 60.7
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 1.5e-50 204.5 163 60.7
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 2.0e-50 204.1 313 44.7
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 2.0e-50 204.1 365 45.5
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 2.6e-50 203.8 305 44.9
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 2.6e-50 203.8 305 44.9
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 2.6e-50 203.8 350 38.3
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 3.4e-50 203.4 375 42.1
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 4.5e-50 203.0 325 41.5
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 5.8e-50 202.6 315 40.6
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 9.9e-50 201.8 171 57.3
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 1.7e-49 201.1 457 36.8
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 6.4e-49 199.1 269 43.5
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 1.1e-48 198.4 390 40.5
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 2.4e-48 197.2 382 36.6
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 4.2e-48 196.4 324 40.1
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 4.2e-48 196.4 377 37.4
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 5.5e-48 196.1 408 34.8
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 7.1e-48 195.7 314 42.4
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 1.6e-47 194.5 318 38.7
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 2.1e-47 194.1 410 33.9
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 6.0e-47 192.6 392 34.9
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 7.9e-47 192.2 397 36.0
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 3.0e-46 190.3 386 36.5
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 1.1e-45 188.3 233 45.9
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 1.5e-45 188.0 325 41.2
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 3.3e-45 186.8 168 54.8
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 3.3e-45 186.8 168 54.8
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 5.6e-45 186.0 169 53.8
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 5.6e-45 186.0 465 35.5
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 7.4e-45 185.7 296 39.2
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 2.8e-44 183.7 488 36.3
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 3.7e-44 183.3 170 53.5
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 6.2e-44 182.6 168 53.0
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 6.2e-44 182.6 420 34.0
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 8.1e-44 182.2 415 33.0
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 1.8e-43 181.0 168 52.4
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 1.8e-43 181.0 396 34.3
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 4.0e-43 179.9 410 34.1
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 9.0e-43 178.7 412 34.7
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 1.2e-42 178.3 497 34.4
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 1.2e-42 178.3 232 46.1
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 2.6e-42 177.2 422 32.9
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 1.1e-40 171.8 317 37.9
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 2.1e-39 167.5 347 34.3
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.3e-38 164.1 406 37.4
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 3.0e-38 163.7 347 36.0
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 3.9e-38 163.3 163 49.1
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 5.1e-38 162.9 424 32.5
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 6.7e-38 162.5 285 41.1
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 1.3e-36 158.3 298 37.2
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 1.8e-35 154.5 427 31.6
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.6e-34 150.6 427 30.9
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 4.5e-34 149.8 251 39.4
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 9.3e-32 142.1 167 43.7
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 1.6e-31 141.4 164 42.1
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 6.1e-31 139.4 158 44.3
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 3.3e-29 133.7 252 36.5
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 8.2e-28 129.0 163 41.7
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 7.7e-26 122.5 152 43.4
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 2.9e-25 120.6 166 38.6
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 5.0e-25 119.8 211 34.6
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 1.0e-22 112.1 183 35.0
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 3.7e-20 103.6 80 65.0
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 6.9e-19 99.4 142 38.0
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 3.6e-15 87.0 66 60.6
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.8e-11 74.7 128 57.0
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 4.5e-10 70.1 53 58.5
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 5.9e-10 69.7 63 52.4


User provided reference genes

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