Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 2.4e-184 648.7 321 100.0
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 4.1e-184 647.9 321 99.7
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 2.8e-177 625.2 321 96.0
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 1.1e-157 560.1 321 86.0
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 9.6e-141 503.8 314 81.5
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.2e-138 496.9 317 79.2
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 2.2e-129 466.1 341 69.8
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 3.2e-128 462.2 311 75.9
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 1.8e-126 456.4 321 72.0
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 1.8e-126 456.4 321 72.0
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 1.5e-125 453.4 320 69.7
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 9.6e-125 450.7 325 69.2
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 9.6e-125 450.7 320 69.7
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 5.3e-123 444.9 338 66.6
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 5.3e-123 444.9 320 67.8
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 5.3e-123 444.9 332 67.2
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.5e-122 443.4 323 69.0
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 3.4e-122 442.2 321 68.8
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 3.4e-122 442.2 320 67.8
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 4.5e-122 441.8 323 68.4
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 4.5e-122 441.8 319 70.5
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 7.6e-122 441.0 343 66.5
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 7.6e-122 441.0 291 72.5
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 1.7e-121 439.9 345 65.8
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 6.4e-121 438.0 334 65.3
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 5.5e-120 434.9 296 70.9
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 5.5e-120 434.9 296 70.9
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 1.2e-119 433.7 318 67.6
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 1.2e-119 433.7 326 67.8
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.6e-119 433.3 318 65.1
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 2.1e-119 433.0 321 64.2
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 1.0e-118 430.6 322 67.1
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 1.3e-118 430.3 269 73.6
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 1.8e-118 429.9 332 66.3
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 3.0e-118 429.1 326 67.5
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 3.9e-118 428.7 338 63.3
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 5.1e-118 428.3 326 67.5
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 8.7e-118 427.6 338 63.6
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 8.7e-118 427.6 336 63.7
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 1.1e-117 427.2 333 66.1
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 2.5e-117 426.0 323 67.8
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 3.3e-117 425.6 317 64.4
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 4.3e-117 425.2 324 67.0
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 7.4e-117 424.5 323 65.6
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 9.6e-117 424.1 361 60.9
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 1.6e-116 423.3 323 67.5
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 2.1e-116 422.9 332 62.3
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 2.8e-116 422.5 322 66.1
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 2.8e-116 422.5 322 67.4
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 2.4e-115 419.5 333 65.2
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 2.4e-115 419.5 323 66.3
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 4.0e-115 418.7 322 65.8
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 4.0e-115 418.7 336 64.3
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 5.3e-115 418.3 351 62.7
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 6.9e-115 417.9 335 63.9
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.2e-114 417.2 331 64.0
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 2.0e-114 416.4 326 64.1
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 2.6e-114 416.0 335 64.5
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 3.4e-114 415.6 329 64.7
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 7.6e-114 414.5 353 61.2
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 7.6e-114 414.5 325 65.8
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.0e-113 414.1 336 63.1
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 1.7e-113 413.3 330 64.8
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 1.7e-113 413.3 329 64.7
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.7e-113 413.3 322 65.8
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 8.4e-113 411.0 327 63.9
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 8.4e-113 411.0 327 63.9
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 8.4e-113 411.0 327 63.9
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 1.9e-112 409.8 323 64.7
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 5.5e-112 408.3 338 62.4
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 1.2e-111 407.1 329 63.2
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 1.6e-111 406.8 317 65.9
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 6.0e-111 404.8 267 71.9
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 6.0e-111 404.8 340 63.2
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 1.0e-110 404.1 297 69.7
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 2.3e-110 402.9 331 63.1
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 3.9e-110 402.1 348 59.8
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 6.7e-110 401.4 285 70.9
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 8.7e-110 401.0 326 64.1
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 8.7e-110 401.0 326 64.1
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 8.7e-110 401.0 326 64.1
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.5e-109 399.4 349 61.0
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 2.5e-109 399.4 319 62.1
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.3e-108 397.1 311 66.6
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.3e-108 397.1 316 63.9
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 2.6e-106 389.4 297 66.0
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 3.4e-106 389.0 314 62.1
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 4.5e-106 388.7 251 71.7
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 6.5e-105 384.8 309 65.7
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 2.5e-104 382.9 296 65.5
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 3.0e-102 375.9 318 59.7
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 5.1e-102 375.2 295 59.3
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 8.8e-102 374.4 300 64.7
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 2.5e-101 372.9 321 61.4
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 4.8e-100 368.6 210 81.4
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 2.0e-98 363.2 267 62.5
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 2.6e-98 362.8 210 79.0
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 4.5e-98 362.1 262 64.1
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.9e-98 361.7 281 60.9
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 1.0e-97 360.9 265 63.0
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.9e-96 356.7 275 57.5
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 5.5e-96 355.1 212 75.5
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 7.9e-95 351.3 324 58.0
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 8.8e-94 347.8 293 63.8
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 2.6e-93 346.3 290 63.8
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 3.3e-93 345.9 276 65.6
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 3.5e-90 335.9 319 57.7
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 4.5e-90 335.5 363 51.2
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 7.7e-90 334.7 291 57.4
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 3.9e-86 322.4 278 61.9
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 8.5e-81 304.7 248 54.8
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 2.7e-79 299.7 225 61.3
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 3.6e-79 299.3 231 58.4
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 6.1e-79 298.5 248 54.8
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 5.2e-70 268.9 215 66.5
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 5.7e-69 265.4 211 66.8
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 1.4e-67 260.8 168 75.0
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 2.0e-66 256.9 230 62.6
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 8.0e-63 245.0 186 60.2
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 2.3e-62 243.4 215 53.5
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 2.7e-58 229.9 232 53.9
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 3.9e-57 226.1 307 44.3
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 3.4e-53 213.0 183 53.6
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 6.4e-52 208.8 175 60.0
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 1.1e-46 191.4 134 67.2
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 3.3e-40 169.9 112 70.5
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.3e-40 169.5 197 44.7
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-39 167.9 197 44.2
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.8e-38 162.2 197 43.1
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-37 161.4 197 43.7
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 7.6e-37 158.7 100 75.0
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.6e-34 151.0 85 78.8
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 3.5e-34 149.8 97 74.2
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 6.0e-34 149.1 102 70.6
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 8.6e-33 145.2 197 40.1
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 8.1e-31 138.7 175 40.6
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 8.9e-30 135.2 77 76.6
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.8e-28 129.8 197 36.5
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 1.6e-26 124.4 84 65.5
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.0e-25 121.7 210 31.9
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.9e-25 119.8 185 34.6
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 5.1e-25 119.4 196 34.7
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 8.7e-25 118.6 197 34.0
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 1.1e-24 118.2 164 43.9
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 5.3e-22 109.4 140 43.6
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.7e-20 104.4 220 31.4
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 6.2e-15 85.9 197 28.9
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 6.2e-15 85.9 183 29.0
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 1.3e-09 68.2 57 57.9
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.3e-08 63.2 102 34.3
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 7.4e-08 62.4 67 44.8
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.1e-07 58.9 32 75.0
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 2.4e-06 57.4 49 53.1


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