Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g070150.1 Solanum lycopersicum HOM05D004528 ORTHO05D005815 1.5e-27 125.6 66 100.0
Solyc07g039210.4 Solanum lycopersicum HOM05D004528 ORTHO05D005815 4.1e-14 80.9 48 89.6
PGSC0003DMG400013151 Solanum tuberosum HOM05D004528 ORTHO05D005815 7.0e-14 80.1 48 87.5
CAN.G1208.1 Capsicum annuum HOM05D004528 ORTHO05D005815 4.5e-13 77.4 48 83.3
Sopen07g017560 Solanum pennellii HOM05D004528 ORTHO05D005815 1.0e-12 76.3 48 83.3
Peaxi162Scf00709g00003 Petunia axillaris HOM05D004528 ORTHO05D005815 9.5e-11 69.7 46 76.1
Nitab4.5_0011030g0010 Nicotiana tabacum HOM05D004528 ORTHO05D005815 1.2e-10 69.3 43 83.7
Nitab4.5_0005634g0070 Nicotiana tabacum HOM05D004528 ORTHO05D005815 6.1e-10 67.0 43 81.4
Thhalv10022707m.g Eutrema salsugineum HOM05D004528 ORTHO05D005815 1.3e-07 59.3 45 64.4
PGR142G0229 Punica granatum HOM05D004528 ORTHO05D005815 1.3e-07 59.3 45 68.9
TWI34G0432 Tripterygium wilfordii HOM05D004528 ORTHO05D005815 1.7e-07 58.9 45 71.1
CSS0033534 Camellia sinensis var. sinensis HOM05D004528 ORTHO05D005815 3.7e-07 57.8 45 68.9
Atru.chr7.1579 Acer truncatum HOM05D004528 ORTHO05D005815 6.4e-07 57.0 43 69.8
CiPaw.03G217000 Carya illinoinensis HOM05D004528 ORTHO05D005815 6.4e-07 57.0 57 59.6
Oeu018425.1 Olea europaea HOM05D004528 ORTHO05D005815 6.4e-07 57.0 63 47.6
DCAR_011978 Daucus carota HOM05D004528 ORTHO05D005815 8.3e-07 56.6 50 62.0
arahy.Tifrunner.gnm1.ann1.A138U3 Arachis hypogaea HOM05D004528 ORTHO05D005815 1.1e-06 56.2 45 64.4
arahy.Tifrunner.gnm1.ann1.PT0GJ5 Arachis hypogaea HOM05D004528 ORTHO05D005815 1.1e-06 56.2 45 64.4
Sed0012435 Sechium edule HOM05D004528 ORTHO05D005815 1.1e-06 56.2 41 73.2
Ciclev10008462m.g Citrus clementina HOM05D004528 ORTHO05D005815 1.4e-06 55.8 57 59.6
MD02G1077700 Malus domestica HOM05D004528 ORTHO05D005815 1.4e-06 55.8 41 70.7
MD15G1206300 Malus domestica HOM05D004528 ORTHO05D005815 1.4e-06 55.8 41 70.7
Sabra06G0171200 Salix brachista HOM05D004528 ORTHO05D005815 1.9e-06 55.5 57 59.6
Thecc.09G090300 Theobroma cacao HOM05D004528 ORTHO05D005815 1.9e-06 55.5 57 57.9
VMungo1215G0680 Vigna mungo HOM05D004528 ORTHO05D005815 1.9e-06 55.5 45 62.2
Lj4g0008156 Lotus japonicus HOM05D004528 ORTHO05D005815 2.4e-06 55.1 48 62.5
Phvul.003G137300 Phaseolus vulgaris HOM05D004528 ORTHO05D005815 2.4e-06 55.1 45 62.2
Aqoxy7G01232 Aquilegia oxysepala HOM05D004528 ORTHO05D005815 3.2e-06 54.7 57 57.9
AL3G48690 Arabidopsis lyrata HOM05D004528 ORTHO05D005815 3.2e-06 54.7 41 63.4
AT2G19560 Arabidopsis thaliana HOM05D004528 ORTHO05D005815 3.2e-06 54.7 41 63.4
MSTRG.17774 Avicennia marina HOM05D004528 ORTHO05D005815 3.2e-06 54.7 43 62.8
BcaB08g34873 Brassica carinata HOM05D004528 ORTHO05D005815 3.2e-06 54.7 41 63.4
Carub.0003s3385 Capsella rubella HOM05D004528 ORTHO05D005815 3.2e-06 54.7 41 63.4
Medtr7g091650 Medicago truncatula HOM05D004528 ORTHO05D005815 3.2e-06 54.7 45 66.7
Sp3g32930 Schrenkiella parvula HOM05D004528 ORTHO05D005815 3.2e-06 54.7 57 52.6
COL.COLO4_18209 Corchorus olitorius HOM05D004528 ORTHO05D005815 4.1e-06 54.3 41 68.3
SGA_v2.0_scaffold62G21604 Striga asiatica HOM05D004528 ORTHO05D005815 4.1e-06 54.3 43 65.1
Lalb_Chr13g0299741 Lupinus albus HOM05D004528 ORTHO05D005815 5.4e-06 53.9 45 62.2
MELO3C004622.2 Cucumis melo HOM05D004528 ORTHO05D005815 7.0e-06 53.5 41 68.3
Gohir.D06G070800 Gossypium hirsutum HOM05D004528 ORTHO05D005815 7.0e-06 53.5 41 68.3
GSVIVG01015212001 Vitis vinifera HOM05D004528 ORTHO05D005815 7.0e-06 53.5 41 68.3
CARHR109990 Cardamine hirsuta HOM05D004528 ORTHO05D005815 9.2e-06 53.1 57 52.6
vmacro17227 Vaccinium macrocarpon HOM05D004528 ORTHO05D005815 9.2e-06 53.1 63 49.2


User provided reference genes

Program Settings