Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.1e-164 583.2 291 100.0
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.1e-164 583.2 291 100.0
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 3.6e-163 578.2 291 98.3
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 3.5e-158 561.6 291 95.2
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.0e-149 533.5 291 89.0
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.3e-149 533.1 288 89.9
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 1.7e-149 532.7 290 88.3
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.0e-149 531.9 291 88.3
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 8.7e-149 530.4 288 89.2
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.3e-148 528.5 291 88.0
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 5.6e-148 527.7 288 88.2
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.2e-147 526.6 291 88.7
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 87.6
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 87.3
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 4.7e-147 524.6 296 87.2
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 87.3
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 8.1e-147 523.9 291 88.0
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.1e-146 523.5 291 88.0
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 1.1e-146 523.5 291 86.9
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 1.4e-146 523.1 288 87.8
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 2.4e-146 522.3 288 87.5
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 2.4e-146 522.3 285 89.1
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 2.4e-146 522.3 291 86.9
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 3.1e-146 521.9 288 88.2
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 4.0e-146 521.5 291 87.3
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 5.2e-146 521.2 291 87.3
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 5.2e-146 521.2 288 87.2
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 5.2e-146 521.2 286 88.5
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 5.2e-146 521.2 290 87.2
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 6.9e-146 520.8 288 87.5
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 6.9e-146 520.8 288 87.8
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 9.0e-146 520.4 291 86.6
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.6
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 1.2e-145 520.0 288 86.8
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.6
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.6
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.0e-145 519.2 288 86.8
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 2.0e-145 519.2 291 85.9
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 3.4e-145 518.5 291 86.6
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 4.4e-145 518.1 291 85.6
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 4.4e-145 518.1 288 87.8
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 9.9e-145 516.9 291 86.9
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 1.3e-144 516.5 291 84.5
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.7e-144 516.2 288 86.8
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 1.7e-144 516.2 288 87.2
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 1.7e-144 516.2 319 80.3
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.9e-144 515.4 291 85.6
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 2.9e-144 515.4 291 85.6
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 2.9e-144 515.4 288 87.2
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 2.9e-144 515.4 288 86.8
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 2.9e-144 515.4 288 86.5
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 4.9e-144 514.6 291 85.6
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 4.9e-144 514.6 291 84.9
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 6.4e-144 514.2 288 87.2
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 6.4e-144 514.2 286 87.1
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 6.4e-144 514.2 286 86.4
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 6.4e-144 514.2 284 87.0
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 8.4e-144 513.8 289 86.5
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 86.1
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 86.1
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 8.4e-144 513.8 288 85.8
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 1.9e-143 512.7 288 86.5
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 1.9e-143 512.7 291 84.9
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 1.9e-143 512.7 276 89.5
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 2.4e-143 512.3 286 86.4
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 2.4e-143 512.3 291 85.2
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 3.2e-143 511.9 285 87.0
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 85.9
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.2e-143 511.9 291 84.9
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 3.2e-143 511.9 288 85.4
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 4.2e-143 511.5 291 84.9
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 4.2e-143 511.5 287 85.0
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 5.4e-143 511.1 288 84.7
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 5.4e-143 511.1 288 84.7
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 5.4e-143 511.1 288 85.8
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 1.2e-142 510.0 292 86.0
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 1.2e-142 510.0 291 84.5
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.2e-142 510.0 291 86.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.6e-142 509.6 288 86.1
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.7e-142 508.8 289 85.5
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 2.7e-142 508.8 289 84.8
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 4.6e-142 508.1 295 83.1
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 6.0e-142 507.7 284 86.6
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 7.8e-142 507.3 292 85.3
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-141 506.5 295 84.7
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 2.3e-141 505.8 288 84.7
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 3.9e-141 505.0 287 85.0
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.5e-140 503.1 289 84.1
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 1.9e-140 502.7 290 85.5
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 3.3e-140 501.9 309 80.6
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 5.6e-140 501.1 291 84.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 7.3e-140 500.7 291 84.5
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 9.6e-140 500.4 291 86.6
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 1.6e-139 499.6 291 84.5
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 2.8e-139 498.8 296 84.1
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 8.1e-139 497.3 273 88.6
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 4.0e-138 495.0 363 70.5
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 1.2e-137 493.4 291 84.9
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 2.0e-137 492.7 271 88.2
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 2.6e-137 492.3 286 83.9
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 3.4e-137 491.9 271 88.2
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 7.6e-137 490.7 288 82.6
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 1.7e-136 489.6 290 83.1
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 2.2e-136 489.2 271 87.1
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 2.2e-136 489.2 278 87.1
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.9e-136 488.8 295 83.1
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 2.9e-136 488.8 295 83.1
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 4.9e-136 488.0 271 87.5
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 7.1e-135 484.2 286 82.9
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 1.6e-134 483.0 269 87.0
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 2.7e-134 482.3 312 78.2
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 3.5e-134 481.9 274 86.5
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 6.0e-134 481.1 271 86.0
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.0e-133 480.3 300 80.3
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.3e-133 479.9 273 83.9
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.8e-133 479.6 288 81.2
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 3.9e-133 478.4 282 82.6
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 8.7e-133 477.2 293 81.9
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 9.6e-132 473.8 273 86.1
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 1.6e-131 473.0 259 88.8
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 2.1e-131 472.6 271 86.3
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 1.8e-130 469.5 271 85.6
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 9.0e-130 467.2 284 81.0
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 6.4e-128 461.1 253 88.5
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 8.4e-128 460.7 323 73.4
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.9e-127 459.5 253 88.1
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 1.2e-126 456.8 258 86.0
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 1.2e-126 456.8 247 89.5
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 1.3e-125 453.4 271 80.1
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.1e-124 450.3 318 74.5
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 1.5e-124 449.9 283 75.6
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 2.8e-123 445.7 286 73.8
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 2.4e-122 442.6 242 89.7
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 3.4e-121 438.7 237 89.9
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 4.2e-119 431.8 254 82.3
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 4.6e-118 428.3 288 76.4
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 4.1e-114 415.2 394 58.4
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 9.0e-114 414.1 287 71.4
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 4.8e-107 391.7 220 85.9
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 3.1e-106 389.0 274 72.6
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 1.9e-103 379.8 198 94.4
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 1.6e-94 350.1 191 85.3
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 3.9e-93 345.5 275 66.2
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 1.4e-90 337.0 190 83.7
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 1.4e-85 320.5 271 63.8
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.4e-85 320.5 288 61.1
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 3.5e-81 305.8 278 57.9
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 9.8e-76 287.7 172 80.2
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 4.1e-74 282.3 254 60.6
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 8.9e-69 264.6 261 51.0
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 6.3e-67 258.5 194 69.6
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 7.8e-49 198.4 193 59.1
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.1e-47 194.5 133 73.7
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.1e-47 194.5 133 73.7
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.0e-36 157.1 142 61.3
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 3.6e-30 136.3 131 58.8
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 2.3e-24 117.1 72 72.2
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 4.3e-23 112.8 91 61.5
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 2.8e-22 110.2 66 72.7
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 1.8e-21 107.5 88 63.6
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 1.8e-21 107.5 88 63.6
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 1.7e-19 100.9 64 76.6
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 5.6e-15 85.9 48 75.0
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 2.8e-14 83.6 46 84.8
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 7.6e-12 75.5 90 54.4
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 7.6e-12 75.5 90 54.4
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 6.5e-11 72.4 45 73.3
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 7.9e-09 65.5 39 82.1
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 5.1e-08 62.8 45 64.4
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 2.8e-06 57.0 34 82.4


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