Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g028930.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-34 149.1 73 100.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-25 118.6 73 82.2
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-25 118.6 73 82.2
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-25 118.6 73 82.2
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-25 118.6 73 82.2
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.0e-25 118.6 73 82.2
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.3e-24 113.2 72 80.6
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.8e-23 112.1 73 79.5
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.0e-21 106.3 73 75.3
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.0e-21 104.0 73 74.0
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 3.3e-20 101.3 73 74.0
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.1e-19 97.1 70 72.9
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 1.2e-17 92.8 53 88.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.8e-15 85.5 73 61.6
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.8e-15 85.5 73 61.6
Nitab4.5_0011099g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.2e-14 82.8 72 63.9
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 1.6e-14 82.4 65 66.2
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.0e-13 79.7 56 69.6
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.9e-12 75.5 74 56.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 4.3e-12 74.3 73 52.1
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 4.3e-12 74.3 73 52.1
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.3e-12 74.3 73 52.1
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-12 73.9 75 56.0
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-12 73.9 75 56.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.6e-12 73.9 75 56.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 5.6e-12 73.9 75 56.0
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 2.8e-11 71.6 75 54.7
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 1.0e-10 69.7 64 60.9
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 1.0e-10 69.7 73 56.2
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 1.8e-10 68.9 73 49.3
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.3e-10 68.6 72 51.4
Nitab4.5_0004184g0050 Nicotiana tabacum HOM05D000216 ORTHO05D014572 3.1e-10 68.2 47 74.5
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.2e-09 66.2 73 52.1
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.0e-09 65.5 74 52.7
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 1.3e-08 62.8 74 50.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.2e-08 62.0 73 50.7
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.9e-08 61.6 72 48.6
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 6.4e-08 60.5 54 61.1
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.4e-07 59.3 75 49.3
BraSC151t45703Z Brassica rapa HOM05D000216 ORTHO05D000634 3.2e-07 58.2 71 42.3
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 9.2e-07 56.6 75 49.3
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
BraSC143t45682Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
BraSC58t46406Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-06 55.5 73 42.5
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-06 55.5 57 57.9
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 3.5e-06 54.7 54 48.1


User provided reference genes

Program Settings