Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g064540.3 Solanum lycopersicum HOM05D004933 ORTHO05D005465 2.3e-204 715.3 358 100.0
Solyc03g095680.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 3.6e-189 664.8 358 93.9
Solyc12g043070.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 5.6e-174 614.4 334 94.0
Peaxi162Scf00073g02333 Petunia axillaris HOM05D004933 ORTHO05D005465 3.0e-159 565.5 361 78.4
Nitab4.5_0006356g0020 Nicotiana tabacum HOM05D004933 ORTHO05D005465 1.9e-158 562.8 371 78.4
Nitab4.5_0000171g0280 Nicotiana tabacum HOM05D004933 ORTHO05D005465 4.5e-155 551.6 371 77.1
Sopen03g025600 Solanum pennellii HOM05D004933 ORTHO05D005465 2.8e-141 505.8 300 87.3
Hma1.2p1_0264F.1_g105950 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.3e-103 379.8 365 53.7
CSS0031284 Camellia sinensis var. sinensis HOM05D004933 ORTHO05D005465 1.3e-101 374.0 363 53.7
Actinidia13639 Actinidia chinensis HOM05D004933 ORTHO05D005465 9.1e-100 367.9 363 52.1
Haze_17369 Corylus avellana HOM05D004933 ORTHO05D005465 5.0e-98 362.1 364 52.7
Atru.chr12.195 Acer truncatum HOM05D004933 ORTHO05D005465 1.1e-97 360.9 363 51.8
Cfa001196 Carpinus fangiana HOM05D004933 ORTHO05D005465 1.1e-97 360.9 363 51.2
QL08p065080 Quercus lobata HOM05D004933 ORTHO05D005465 2.5e-97 359.8 363 50.4
CANSAT56G0526 Cannabis sativa HOM05D004933 ORTHO05D005465 2.8e-96 356.3 371 50.7
Hma1.2p1_1805F.1_g303150 Hydrangea macrophylla HOM05D004933 ORTHO05D005465 2.8e-96 356.3 341 53.4
Migut.F00567 Erythranthe guttata HOM05D004933 ORTHO05D005465 1.0e-95 354.4 363 52.6
arahy.Tifrunner.gnm1.ann1.LX8ZS6 Arachis hypogaea HOM05D004933 ORTHO05D005465 1.8e-95 353.6 344 52.9
arahy.Tifrunner.gnm1.ann1.561PLB Arachis hypogaea HOM05D004933 ORTHO05D005465 2.3e-95 353.2 344 53.2
Oeu064001.1 Olea europaea HOM05D004933 ORTHO05D005465 4.0e-95 352.4 395 49.6
Ciclev10030489m.g Citrus clementina HOM05D004933 ORTHO05D005465 5.2e-95 352.1 366 50.8
TPR.G33913 Trifolium pratense HOM05D004933 ORTHO05D005465 5.2e-95 352.1 368 52.2
CiPaw.01G307300 Carya illinoinensis HOM05D004933 ORTHO05D005465 6.8e-95 351.7 366 50.5
Gohir.A10G177700 Gossypium hirsutum HOM05D004933 ORTHO05D005465 6.8e-95 351.7 362 51.1
Gorai.011G206500 Gossypium raimondii HOM05D004933 ORTHO05D005465 8.9e-95 351.3 362 51.1
LjContig00408g0012805 Lotus japonicus HOM05D004933 ORTHO05D005465 8.9e-95 351.3 368 50.3
Medtr5g067980 Medicago truncatula HOM05D004933 ORTHO05D005465 8.9e-95 351.3 361 50.1
Psat2g061800 Pisum sativum HOM05D004933 ORTHO05D005465 8.9e-95 351.3 370 49.7
Gohir.D10G184300 Gossypium hirsutum HOM05D004933 ORTHO05D005465 4.4e-94 349.0 362 50.8
VMungo0647G1932 Vigna mungo HOM05D004933 ORTHO05D005465 9.8e-94 347.8 366 50.0
Cc02_g05220 Coffea canephora HOM05D004933 ORTHO05D005465 1.7e-93 347.1 379 51.2
Glyma.02G219200 Glycine max HOM05D004933 ORTHO05D005465 3.7e-93 345.9 371 49.6
Rhsim03G0153500 Rhododendron simsii HOM05D004933 ORTHO05D005465 1.8e-92 343.6 360 50.0
Manes.10G003100 Manihot esculenta HOM05D004933 ORTHO05D005465 7.0e-92 341.7 367 48.0
Thecc.10G184900 Theobroma cacao HOM05D004933 ORTHO05D005465 7.0e-92 341.7 369 50.4
Lj8C53G7 Lonicera japonica HOM05D004933 ORTHO05D005465 2.7e-91 339.7 362 51.1
Sabra19G0074700 Salix brachista HOM05D004933 ORTHO05D005465 2.7e-91 339.7 366 47.3
Cpa.g.sc19.41 Carica papaya HOM05D004933 ORTHO05D005465 7.8e-91 338.2 365 48.2
Duzib106G0698 Durio zibethinus HOM05D004933 ORTHO05D005465 7.8e-91 338.2 366 51.9
DCAR_014660 Daucus carota HOM05D004933 ORTHO05D005465 3.8e-90 335.9 369 50.1
Lalb_Chr17g0344711 Lupinus albus HOM05D004933 ORTHO05D005465 5.0e-90 335.5 364 50.0
TWI09G0099 Tripterygium wilfordii HOM05D004933 ORTHO05D005465 6.6e-90 335.1 369 49.3
Sopen03g025610 Solanum pennellii HOM05D004933 ORTHO05D005465 8.6e-90 334.7 180 92.2
MD01G1169300 Malus domestica HOM05D004933 ORTHO05D005465 1.1e-89 334.3 365 50.1
Potri.019G060900 Populus trichocarpa HOM05D004933 ORTHO05D005465 1.1e-89 334.3 368 46.5
RcHm_v2.0_Chr1g0372551 Rosa chinensis HOM05D004933 ORTHO05D005465 2.1e-88 330.1 372 50.0
vmacro06901 Vaccinium macrocarpon HOM05D004933 ORTHO05D005465 8.0e-88 328.2 399 46.9
FAN03G3286 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.8e-87 327.0 374 48.4
TAR623G0849 Trochodendron aralioides HOM05D004933 ORTHO05D005465 5.2e-87 325.5 363 49.0
ClCG11G005620 Citrullus lanatus HOM05D004933 ORTHO05D005465 8.9e-87 324.7 367 48.0
Phvul.008G186300 Phaseolus vulgaris HOM05D004933 ORTHO05D005465 3.4e-86 322.8 342 50.0
GSVIVG01032657001 Vitis vinifera HOM05D004933 ORTHO05D005465 5.8e-86 322.0 352 49.7
Sed0014960 Sechium edule HOM05D004933 ORTHO05D005465 7.5e-86 321.6 364 48.4
COL.COLO4_19474 Corchorus olitorius HOM05D004933 ORTHO05D005465 2.2e-85 320.1 343 50.1
FAN10G2846 Fragaria x ananassa HOM05D004933 ORTHO05D005465 2.2e-85 320.1 374 48.1
FAN06G3663 Fragaria x ananassa HOM05D004933 ORTHO05D005465 6.4e-85 318.5 374 48.1
MELO3C020016.2 Cucumis melo HOM05D004933 ORTHO05D005465 1.1e-84 317.8 368 48.4
Hund13438 Selenicereus undatus HOM05D004933 ORTHO05D005465 1.8e-84 317.0 368 50.3
FvH4_7g26110 Fragaria vesca HOM05D004933 ORTHO05D005465 2.4e-84 316.6 374 48.4
CsaV3_6G002390 Cucumis sativus L. HOM05D004933 ORTHO05D005465 3.2e-84 316.2 368 47.8
Eucgr.J00103 Eucalyptus grandis HOM05D004933 ORTHO05D005465 9.2e-84 314.7 368 47.3
Sc11g0006050 Simmondsia chinensis HOM05D004933 ORTHO05D005465 2.7e-83 313.2 363 47.4
PGR044G2398 Punica granatum HOM05D004933 ORTHO05D005465 3.0e-82 309.7 374 45.2
THA.LOC104824249 Tarenaya hassleriana HOM05D004933 ORTHO05D005465 7.3e-81 305.1 363 46.3
unitig_0.g1674 Utricularia gibba HOM05D004933 ORTHO05D005465 2.8e-80 303.1 362 45.9
HanXRQChr14g0460551 Helianthus annuus HOM05D004933 ORTHO05D005465 1.4e-79 300.8 378 47.6
Nn2g10269 Nelumbo nucifera HOM05D004933 ORTHO05D005465 6.8e-79 298.5 365 47.1
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 8.3e-77 291.6 365 45.8
Ah.12g064450 Amaranthus hybridus HOM05D004933 ORTHO05D005465 1.1e-76 291.2 370 47.3
Sopen10g016820 Solanum pennellii HOM05D004933 ORTHO05D005465 1.6e-75 287.3 157 93.6
EL10Ac2g02668 Beta vulgaris HOM05D004933 ORTHO05D005465 8.6e-74 281.6 381 44.4
AUR62030592 Chenopodium quinoa HOM05D004933 ORTHO05D005465 3.3e-73 279.6 367 44.1
AUR62024946 Chenopodium quinoa HOM05D004933 ORTHO05D005465 5.6e-73 278.9 367 43.9
Aqoxy4G03277 Aquilegia oxysepala HOM05D004933 ORTHO05D005465 1.2e-72 277.7 362 42.3
Sp4g23090 Schrenkiella parvula HOM05D004933 ORTHO05D005465 1.2e-72 277.7 366 44.0
Aa31LG3G1370 Aethionema arabicum HOM05D004933 ORTHO05D005465 1.6e-72 277.3 356 41.9
Thhalv10016132m.g Eutrema salsugineum HOM05D004933 ORTHO05D005465 6.2e-72 275.4 365 43.0
Carub.0004s2307 Capsella rubella HOM05D004933 ORTHO05D005465 2.0e-70 270.4 362 43.9
AL4G38660 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 2.2e-69 266.9 364 43.1
CARHR135870 Cardamine hirsuta HOM05D004933 ORTHO05D005465 4.9e-69 265.8 364 44.0
Lsat_1_v5_gn_2_126780 Lactuca sativa HOM05D004933 ORTHO05D005465 6.4e-69 265.4 357 43.1
AL4G34440 Arabidopsis lyrata HOM05D004933 ORTHO05D005465 1.1e-68 264.6 362 43.1
AT2G40770 Arabidopsis thaliana HOM05D004933 ORTHO05D005465 7.1e-68 261.9 364 42.3
FAN18G3827 Fragaria x ananassa HOM05D004933 ORTHO05D005465 1.9e-65 253.8 368 41.8
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 5.6e-65 252.3 224 56.2
BolC4t28354H Brassica oleracea HOM05D004933 ORTHO05D005465 6.2e-64 248.8 367 42.2
BraA04t18570Z Brassica rapa HOM05D004933 ORTHO05D005465 6.8e-63 245.4 364 42.0
PSO170G4230 Papaver somniferum HOM05D004933 ORTHO05D005465 6.8e-63 245.4 391 42.7
ATR1127G041 Amborella trichopoda HOM05D004933 ORTHO05D005465 8.9e-63 245.0 378 41.0
C04p68550 Brassica napus HOM05D004933 ORTHO05D005465 8.9e-63 245.0 367 41.7
BcaC02g12882 Brassica carinata HOM05D004933 ORTHO05D005465 1.2e-62 244.6 367 41.7
A04p31150 Brassica napus HOM05D004933 ORTHO05D005465 1.5e-62 244.2 364 41.8
PSO017G2233 Papaver somniferum HOM05D004933 ORTHO05D005465 1.7e-61 240.7 389 41.9
Solyc09g042480.2 Solanum lycopersicum HOM05D004933 ORTHO05D005465 9.2e-60 235.0 192 68.8
HPP92_012544 Vanilla planifolia HOM05D004933 ORTHO05D005465 3.4e-54 216.5 368 40.5
MBI15_g39394_MAGBIO Magnolia biondii HOM05D004933 ORTHO05D005465 5.3e-47 192.6 375 36.8
CDE04G3054 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 3.2e-36 156.8 280 38.9
PSO063G4276 Papaver somniferum HOM05D004933 ORTHO05D005465 7.6e-30 135.6 171 46.8
Prupe.2G265500 Prunus persica HOM05D004933 ORTHO05D005465 1.2e-22 111.7 92 54.3
Pp3c18_13500 Physcomitrium patens HOM05D004933 ORTHO05D005465 3.4e-22 110.2 268 31.7
CDE04G2226 Ceratophyllum demersum HOM05D004933 ORTHO05D005465 2.0e-17 94.4 89 47.2
AagrBONN_evm.TU.Sc2ySwM_344.3336 Anthoceros agrestis HOM05D004933 ORTHO05D005465 5.7e-17 92.8 264 31.4
Actinidia31635 Actinidia chinensis HOM05D004933 ORTHO05D005465 4.8e-16 89.7 84 51.2
LjContig00408g0027695 Lotus japonicus HOM05D004933 ORTHO05D005465 1.1e-15 88.6 97 44.3
SMO361G0687 Selaginella moellendorffii HOM05D004933 ORTHO05D005465 9.4e-12 75.5 156 32.1
Dinv21857 Davidia involucrata HOM05D004933 ORTHO05D005465 4.1e-07 60.1 61 47.5


User provided reference genes

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