Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 1.5e-300 1035.4 522 100.0
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.7e-296 1021.9 521 99.0
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 5.5e-287 990.3 521 96.2
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.4e-258 896.0 520 87.7
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.0e-256 889.8 518 86.9
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.9e-255 885.6 521 86.9
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 7.0e-250 867.1 522 84.3
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 5.0e-224 781.2 457 86.9
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 6.2e-190 667.9 493 70.6
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 6.2e-190 667.9 493 70.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 8.1e-190 667.5 452 75.9
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 9.0e-189 664.1 515 69.1
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 1.5e-188 663.3 493 70.4
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 1.5e-188 663.3 516 68.4
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 2.6e-188 662.5 512 67.8
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 7.6e-188 661.0 522 66.9
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 3.8e-187 658.7 494 70.2
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 4.9e-187 658.3 530 65.7
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.1e-186 657.1 497 69.8
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.9e-186 656.4 464 72.2
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 4.2e-186 655.2 509 68.4
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 7.1e-186 654.4 492 69.1
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 1.6e-185 653.3 501 66.9
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 2.7e-185 652.5 525 64.2
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 4.6e-185 651.7 488 67.4
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 4.6e-185 651.7 487 70.0
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 1.0e-184 650.6 472 69.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.0e-184 650.6 469 69.5
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 1.3e-184 650.2 494 68.8
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 3.0e-184 649.0 474 69.6
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 3.0e-184 649.0 460 71.5
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 5.1e-184 648.3 446 73.1
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 5.1e-184 648.3 446 73.1
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 1.1e-183 647.1 482 67.2
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 2.5e-183 646.0 510 67.1
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 2.5e-183 646.0 478 68.2
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 2.5e-183 646.0 481 69.0
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 2.5e-183 646.0 482 67.4
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 5.6e-183 644.8 475 70.3
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 7.4e-183 644.4 479 69.7
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 9.6e-183 644.0 513 66.3
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 1.3e-182 643.7 478 68.0
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 1.6e-182 643.3 478 68.0
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 1.6e-182 643.3 520 65.6
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 2.1e-182 642.9 468 72.0
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 2.1e-182 642.9 487 68.4
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 2.8e-182 642.5 478 68.0
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.8e-182 642.5 445 73.3
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 2.8e-182 642.5 449 71.5
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 4.8e-182 641.7 513 65.9
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 4.8e-182 641.7 480 69.2
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 8.2e-182 641.0 449 71.3
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 8.2e-182 641.0 487 68.2
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 1.1e-181 640.6 511 65.8
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.4e-181 640.2 443 74.7
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 1.4e-181 640.2 506 66.2
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 3.1e-181 639.0 524 63.9
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 3.1e-181 639.0 470 67.9
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.0e-181 638.6 449 71.3
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 4.0e-181 638.6 523 66.0
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 5.3e-181 638.3 453 70.9
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 5.3e-181 638.3 453 70.9
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 5.3e-181 638.3 492 66.7
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 6.9e-181 637.9 451 72.3
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 1.2e-180 637.1 495 67.7
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 2.6e-180 636.0 449 70.8
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 2.6e-180 636.0 492 66.3
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 4.5e-180 635.2 511 65.4
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 5.8e-180 634.8 494 67.6
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 1.0e-179 634.0 453 70.6
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 1.3e-179 633.6 448 69.9
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 1.7e-179 633.3 455 71.2
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 2.2e-179 632.9 476 67.9
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 2.9e-179 632.5 448 71.4
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 3.8e-179 632.1 525 63.4
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 3.8e-179 632.1 450 71.1
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 8.4e-179 630.9 487 66.9
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 1.1e-178 630.6 511 65.0
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.1e-178 630.6 439 72.4
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 3.2e-178 629.0 452 70.4
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 5.5e-178 628.2 492 66.7
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 5.5e-178 628.2 496 67.5
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 7.1e-178 627.9 520 63.3
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.6e-177 626.7 443 70.7
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 2.1e-177 626.3 507 65.1
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 2.1e-177 626.3 448 72.3
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 2.7e-177 625.9 444 71.8
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 7.9e-177 624.4 497 66.2
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 1.0e-176 624.0 499 65.1
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.8e-176 623.2 455 70.1
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 8.7e-176 620.9 458 68.6
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.5e-175 620.2 472 66.9
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.4e-175 617.8 449 69.9
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 1.3e-174 617.1 453 70.9
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.8e-174 615.9 442 70.4
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 4.1e-173 612.1 452 70.6
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 5.0e-171 605.1 446 68.6
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 4.2e-170 602.1 448 69.9
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 2.1e-169 599.7 458 66.2
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.8e-168 596.7 455 65.9
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 3.9e-168 595.5 456 66.4
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 6.7e-168 594.7 468 65.0
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 8.8e-168 594.3 579 58.2
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 2.4e-165 586.3 464 64.9
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 9.7e-159 564.3 443 64.3
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 6.3e-158 561.6 446 62.3
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 5.3e-157 558.5 447 64.9
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 2.6e-156 556.2 464 60.3
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 2.5e-154 549.7 453 61.6
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 4.1e-141 505.8 449 56.6
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 7.0e-141 505.0 445 58.4
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 1.3e-134 484.2 386 63.2
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.7e-134 483.8 320 76.2
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 8.3e-134 481.5 486 51.0
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 3.1e-133 479.6 507 51.1
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.2e-132 477.6 447 57.0
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 1.7e-126 457.2 446 57.8
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 8.3e-126 454.9 454 56.8
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 7.5e-119 431.8 431 55.0
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 4.6e-108 396.0 456 51.1
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.4e-96 357.8 266 68.8
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 3.6e-81 306.6 411 45.3
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 8.1e-81 305.4 416 40.6
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 3.8e-78 296.6 370 50.0
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 1.4e-77 294.7 198 74.7
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.8e-75 287.7 227 63.0
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 8.2e-65 252.3 245 58.8
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 5.3e-64 249.6 355 37.7
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.2e-63 248.4 175 73.7
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.7e-60 237.3 351 45.6
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 1.8e-59 234.6 323 39.6
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.5e-54 215.7 163 65.6
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 6.7e-51 206.1 406 36.7
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 6.3e-41 172.9 149 60.4
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 8.2e-33 146.0 142 57.7
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.2e-30 137.9 97 69.1
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 6.3e-25 119.8 80 68.8
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 1.4e-24 118.6 115 57.4
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.4e-24 117.9 99 63.6
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 6.8e-19 99.8 57 86.0
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 2.6e-18 97.8 62 74.2
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 2.0e-15 88.2 70 58.6
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 4.5e-15 87.0 75 64.0
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 5.0e-14 83.6 49 81.6
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 5.0e-14 83.6 49 81.6
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 5.0e-14 83.6 62 64.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 1.1e-08 65.9 73 52.1


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