Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 9.1e-232 806.6 422 100.0
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 9.1e-232 806.6 422 100.0
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 7.2e-229 797.0 422 98.6
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 5.7e-226 787.3 422 96.9
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 7.7e-223 776.9 439 93.4
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 4.4e-218 761.1 421 94.5
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 6.5e-214 747.3 429 90.4
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 5.7e-210 734.2 418 89.0
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 9.8e-210 733.4 420 89.0
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 1.3e-209 733.0 420 88.8
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 2.8e-209 731.9 419 88.5
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 8.3e-209 730.3 421 87.6
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 8.3e-209 730.3 421 88.8
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 8.3e-209 730.3 420 87.6
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 1.1e-208 729.9 419 87.8
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 1.8e-208 729.2 419 88.5
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 1.8e-208 729.2 419 88.8
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 2.4e-208 728.8 421 87.6
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 3.1e-208 728.4 418 87.8
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 3.1e-208 728.4 421 87.6
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 4.1e-208 728.0 421 88.1
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 4.1e-208 728.0 418 88.8
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 5.4e-208 727.6 418 87.6
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 7.0e-208 727.2 420 87.9
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 1.2e-207 726.5 419 87.4
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 1.2e-207 726.5 421 88.1
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 1.2e-207 726.5 421 87.2
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 1.6e-207 726.1 418 88.0
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.6e-207 726.1 418 87.8
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 2.0e-207 725.7 418 88.0
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 2.0e-207 725.7 419 87.1
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 2.7e-207 725.3 420 87.6
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 4.5e-207 724.5 421 86.7
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 4.5e-207 724.5 421 86.7
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 4.5e-207 724.5 419 87.4
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 5.9e-207 724.2 418 87.8
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 5.9e-207 724.2 427 86.7
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 7.7e-207 723.8 422 91.2
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 7.7e-207 723.8 419 87.1
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 2.3e-206 722.2 421 86.5
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 2.3e-206 722.2 420 88.1
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 2.9e-206 721.8 419 87.6
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 2.9e-206 721.8 421 86.5
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 2.9e-206 721.8 420 88.1
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 2.9e-206 721.8 418 87.3
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 3.8e-206 721.5 421 86.7
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 5.0e-206 721.1 420 87.1
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 5.0e-206 721.1 419 87.1
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 5.0e-206 721.1 419 88.3
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 6.5e-206 720.7 420 86.9
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 6.5e-206 720.7 420 87.9
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 1.1e-205 719.9 420 86.7
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.1e-205 719.9 418 86.8
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 1.1e-205 719.9 419 87.6
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 1.5e-205 719.5 420 86.7
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.5e-205 719.5 420 87.4
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 1.9e-205 719.2 420 87.1
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 2.5e-205 718.8 421 87.2
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.5e-205 718.8 418 87.1
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 3.2e-205 718.4 419 87.1
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 4.2e-205 718.0 419 87.1
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 4.2e-205 718.0 420 86.7
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 5.5e-205 717.6 420 86.9
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 5.5e-205 717.6 420 86.7
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 7.2e-205 717.2 420 86.9
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 9.5e-205 716.8 420 87.4
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 9.5e-205 716.8 421 86.2
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 1.2e-204 716.5 419 87.4
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.2e-204 716.5 436 84.2
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 1.2e-204 716.5 420 87.4
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 2.1e-204 715.7 420 86.7
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 2.1e-204 715.7 420 86.7
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 2.1e-204 715.7 419 87.6
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 2.8e-204 715.3 420 86.7
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 2.8e-204 715.3 420 86.7
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 2.8e-204 715.3 420 86.7
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 2.8e-204 715.3 420 86.9
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 1.0e-203 713.4 421 86.0
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 1.0e-203 713.4 420 86.4
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 1.0e-203 713.4 420 86.4
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 1.4e-203 713.0 420 86.4
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 1.4e-203 713.0 419 85.7
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 1.8e-203 712.6 438 84.7
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 2.3e-203 712.2 420 86.2
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 2.3e-203 712.2 421 86.5
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 3.0e-203 711.8 418 86.1
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 3.0e-203 711.8 419 85.9
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 3.0e-203 711.8 419 86.6
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 4.0e-203 711.4 420 85.7
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 4.0e-203 711.4 420 86.4
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 6.8e-203 710.7 430 85.1
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 8.8e-203 710.3 422 85.8
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 1.2e-202 709.9 421 86.2
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 1.5e-202 709.5 419 85.2
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 1.5e-202 709.5 419 85.4
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 1.5e-202 709.5 419 85.0
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 4.4e-202 708.0 471 79.4
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 4.4e-202 708.0 471 79.4
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 5.7e-202 707.6 451 81.8
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 7.5e-202 707.2 419 85.0
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 7.5e-202 707.2 419 84.7
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 1.7e-201 706.1 419 85.2
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 1.7e-201 706.1 421 84.3
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 4.9e-201 704.5 419 84.7
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 4.9e-201 704.5 419 85.2
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 6.3e-201 704.1 419 85.2
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 1.4e-200 703.0 419 85.2
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 2.4e-200 702.2 421 85.0
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 2.4e-200 702.2 421 84.8
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 3.1e-200 701.8 448 82.8
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 4.1e-200 701.4 419 84.5
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 1.2e-199 699.9 419 84.2
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 1.6e-199 699.5 419 84.0
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 7.8e-199 697.2 424 86.1
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 1.0e-198 696.8 420 86.0
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.7e-198 696.0 419 85.0
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 6.6e-198 694.1 422 84.1
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 8.6e-198 693.7 421 84.8
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 2.0e-194 682.6 424 81.8
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 8.3e-193 677.2 502 72.7
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 2.4e-192 675.6 388 88.7
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 7.0e-192 674.1 421 82.7
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 3.5e-191 671.8 471 76.6
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 1.6e-188 662.9 374 89.6
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 9.2e-184 647.1 385 85.7
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.7e-183 645.6 416 81.0
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 1.0e-182 643.7 378 85.2
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 4.3e-181 638.3 373 85.8
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.2e-180 636.7 363 87.9
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 2.0e-178 629.4 398 79.4
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 1.3e-177 626.7 406 78.1
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 2.3e-174 615.9 419 77.6
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 1.1e-171 607.1 416 74.0
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 4.6e-167 591.7 400 73.2
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 4.3e-165 585.1 334 88.0
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 3.1e-163 578.9 408 75.0
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 3.1e-155 552.4 309 91.3
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 6.7e-150 534.6 423 65.5
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 6.7e-150 534.6 396 67.4
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 4.0e-147 525.4 399 67.2
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 3.2e-136 489.2 458 61.8
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 1.8e-134 483.4 278 88.8
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.9e-133 479.9 284 83.8
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 9.7e-125 451.1 260 87.7
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 2.2e-124 449.9 392 65.1
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 2.8e-116 422.9 241 89.2
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 1.7e-108 397.1 236 82.6
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.5e-104 384.0 225 84.4
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 8.5e-97 358.2 244 74.2
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 5.5e-96 355.5 205 87.3
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 1.3e-84 317.8 288 61.8
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 9.5e-72 275.0 293 49.5
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 4.9e-68 262.7 207 66.7
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 1.1e-64 251.5 147 83.7
Haze_26747 Corylus avellana HOM05D004007 ORTHO05D005127 6.4e-60 235.7 189 61.9
Zm00001eb277730 Zea mays HOM05D004007 ORTHO05D005127 2.4e-51 207.2 134 75.4
Actinidia30141 Actinidia chinensis HOM05D004007 ORTHO05D002753 2.5e-48 197.2 194 61.3
TAR365G0472 Trochodendron aralioides HOM05D004007 ORTHO05D022233 2.9e-44 183.7 112 87.5
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 1.9e-43 181.0 119 72.3
Aqoxy7G03385 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 7.3e-40 169.1 150 65.3
Cfa021785 Carpinus fangiana HOM05D001982 ORTHO05D003938 2.4e-38 164.1 288 36.5
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 2.4e-38 164.1 108 76.9
Lj2C1145T6 Lonicera japonica HOM05D004007 ORTHO05D022233 6.4e-36 156.0 157 59.9
Lj2C1146T3 Lonicera japonica HOM05D004007 ORTHO05D022233 8.4e-36 155.6 157 59.2
CSS0040446 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 1.1e-27 128.6 82 75.6
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 3.9e-25 120.2 179 36.3
CiPaw.03G130300 Carya illinoinensis HOM05D004007 ORTHO05D005127 9.6e-24 115.5 69 82.6
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 5.3e-22 109.8 129 51.2
HanXRQChr10g0293611 Helianthus annuus HOM05D004007 ORTHO05D219627 1.1e-14 85.5 100 51.0
FvH4_2g21030 Fragaria vesca HOM05D004007 ORTHO05D022233 6.9e-14 82.8 51 82.4
Cpa.g.sc165.34 Carica papaya HOM05D004007 ORTHO05D022233 4.5e-13 80.1 48 89.6
Haze_26311 Corylus avellana HOM05D002944 ORTHO05D003377 6.5e-12 76.3 386 27.2
Lalb_Chr21g0314011 Lupinus albus HOM05D004007 ORTHO05D022233 2.5e-11 74.3 40 92.5
EL10Ac1g01458 Beta vulgaris HOM05D006505 ORTHO05D008086 1.6e-10 71.6 113 39.8
EL10Ac7g17956 Beta vulgaris HOM05D006505 ORTHO05D008086 3.6e-10 70.5 111 39.6
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 2.0e-08 64.7 37 81.1
TAR636G1356 Trochodendron aralioides HOM05D002574 ORTHO05D002797 2.0e-08 64.7 63 50.8
ECA234G3088 Erigeron canadensis HOM05D002061 ORTHO05D002849 1.7e-07 61.6 416 22.1
Ciclev10031633m.g Citrus clementina HOM05D002061 ORTHO05D002849 4.8e-07 60.1 407 24.1
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 1.1e-06 58.9 413 22.8
MELO3C010675.2 Cucumis melo HOM05D002061 ORTHO05D002849 1.4e-06 58.5 413 22.0
CsaV3_2G024770 Cucumis sativus L. HOM05D002061 ORTHO05D002849 1.4e-06 58.5 413 22.0
HanXRQChr12g0384281 Helianthus annuus HOM05D002061 ORTHO05D002849 1.4e-06 58.5 416 21.6
ClCG08G017860 Citrullus lanatus HOM05D002061 ORTHO05D005707 1.8e-06 58.2 416 22.6
Aqoxy3G01074 Aquilegia oxysepala HOM05D002061 ORTHO05D002849 6.9e-06 56.2 418 23.2
QL03p059234 Quercus lobata HOM05D002061 ORTHO05D002849 6.9e-06 56.2 416 23.1
RcHm_v2.0_Chr4g0441981 Rosa chinensis HOM05D002061 ORTHO05D002849 9.1e-06 55.8 405 23.0


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