Gene: Sed0025966

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0025966
  • Transcript Identifier Sed0025966.1
  • Gene Type Coding gene
  • Location LG03 : 42947997-42971013 : negative

Gene Family Information

  • ID HOM05D002061
  • #Genes/#Species 323/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0025966.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
ISO
PLAZA Integrative Orthologyproteasome-mediated ubiquitin-dependent protein catabolic process AT1G23390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G23390
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G23390
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G23390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016102 Succinyl-CoA synthetase-like
IPR036047 F-box-like domain superfamily
IPR015915 Kelch-type beta propeller
IPR001810 F-box domain
IPR032263 ATP-citrate synthase, citrate-binding domain
IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type
Mapman id Description
5.1.1.2.1 Lipid metabolism.fatty acid biosynthesis.citrate shuttle.ATP-dependent citrate lyase heterodimer.alpha chain
9.2.2.2.1.2 Secondary metabolism.phenolics.flavonoid biosynthesis.chalcones.chalcone synthase activity.regulatory substrate adaptor of SCF ubiquitin ligase (KFB-CHS)