Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g099440.4 Solanum lycopersicum HOM05D000246 ORTHO05D007179 2.6e-82 308.5 144 100.0
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 4.9e-44 181.4 125 76.8
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 1.1e-43 180.3 125 76.8
Solyc01g099460.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 4.6e-42 174.9 124 75.0
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 8.6e-41 170.6 125 73.6
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 2.5e-40 169.1 158 60.8
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.2e-39 166.8 159 58.5
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 1.1e-27 127.1 133 51.9
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 1.3e-25 120.2 133 52.6
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 6.6e-25 117.9 134 51.5
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 6.6e-25 117.9 128 50.0
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 6.6e-25 117.9 135 49.6
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 8.7e-25 117.5 129 49.6
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 1.1e-24 117.1 134 51.5
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 1.9e-24 116.3 132 51.5
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 2.5e-24 115.9 131 51.1
CSS0023091 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 3.3e-24 115.5 134 50.0
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 4.3e-24 115.2 133 50.4
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 7.3e-24 114.4 133 48.1
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 9.6e-24 114.0 135 50.4
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 9.6e-24 114.0 134 53.0
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.6e-23 113.2 132 48.5
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 2.1e-23 112.8 134 49.3
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 2.8e-23 112.5 132 49.2
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 2.8e-23 112.5 133 49.6
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 3.6e-23 112.1 136 47.1
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 4.7e-23 111.7 132 46.2
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 4.7e-23 111.7 132 46.2
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 8.1e-23 110.9 133 47.4
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 8.1e-23 110.9 133 48.1
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 1.4e-22 110.2 132 44.7
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 1.4e-22 110.2 134 48.5
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 1.8e-22 109.8 134 47.0
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 1.8e-22 109.8 133 46.6
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 5.2e-22 108.2 136 45.6
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 6.9e-22 107.8 134 44.8
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 1.2e-21 107.1 133 46.6
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.2e-21 107.1 136 46.3
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.5e-21 106.7 136 46.3
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 1.5e-21 106.7 133 48.1
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 1.5e-21 106.7 134 47.8
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 1.5e-21 106.7 131 48.1
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 1.5e-21 106.7 131 48.1
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 2.0e-21 106.3 129 48.8
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 2.0e-21 106.3 133 46.6
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 2.0e-21 106.3 131 44.3
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 3.4e-21 105.5 133 44.4
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 4.4e-21 105.1 135 48.1
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 4.4e-21 105.1 130 48.5
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 4.4e-21 105.1 136 44.1
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 5.8e-21 104.8 134 46.3
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 5.8e-21 104.8 137 44.5
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 5.8e-21 104.8 137 44.5
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 9.9e-21 104.0 136 46.3
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 2.2e-20 102.8 131 45.8
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 2.2e-20 102.8 130 47.7
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 2.2e-20 102.8 134 45.5
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 2.9e-20 102.4 125 50.4
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 3.8e-20 102.1 130 44.6
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 3.8e-20 102.1 132 47.0
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 6.4e-20 101.3 133 45.1
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 8.4e-20 100.9 130 44.6
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 8.4e-20 100.9 134 46.3
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 1.4e-19 100.1 131 45.0
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.4e-19 100.1 133 45.1
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 2.4e-19 99.4 135 43.7
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 5.4e-19 98.2 133 43.6
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 7.1e-19 97.8 135 43.0
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 1.2e-18 97.1 139 43.2
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 1.2e-18 97.1 139 43.2
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 1.2e-18 97.1 133 43.6
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 1.6e-18 96.7 135 43.0
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.6e-18 96.7 133 42.9
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 2.7e-18 95.9 134 44.0
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 3.5e-18 95.5 135 43.7
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 3.5e-18 95.5 132 42.4
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 6.0e-18 94.7 135 43.0
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 6.0e-18 94.7 135 43.0
Sopen02g033150 Solanum pennellii HOM05D000246 ORTHO05D007179 7.8e-18 94.4 63 71.4
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 2.3e-17 92.8 116 47.4
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 2.3e-17 92.8 126 43.7
Dinv40317 Davidia involucrata HOM05D000246 ORTHO05D007179 2.3e-17 92.8 114 47.4
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 5.1e-17 91.7 137 42.3
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.5e-16 90.1 141 39.7
Eucgr.F00584 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.9e-16 89.7 142 42.3
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 2.5e-16 89.4 135 41.5
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.3e-15 87.0 169 38.5
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 1.6e-15 86.7 136 40.4
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 6.2e-15 84.7 133 39.1
CDE01G0252 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 8.1e-15 84.3 94 50.0
Eucgr.H04508 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.8e-14 83.2 93 49.5
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.8e-14 83.2 128 40.6
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 3.8e-12 75.5 91 46.2
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 9.3e-11 70.9 110 41.8
SHI18109 Sapria himalayana HOM05D000246 ORTHO05D007179 9.3e-11 70.9 44 79.5
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 3.5e-10 68.9 106 42.5
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 4.6e-10 68.6 133 36.1
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 6.7e-09 64.7 99 36.4
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.5e-08 63.5 74 41.9
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 4.3e-08 62.0 137 29.2
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 1.3e-07 60.5 93 36.6


User provided reference genes

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