Gene: AL6G39350
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL6G39350
- Transcript Identifier AL6G39350.t1
- Gene Type Coding gene
- Location scaffold_6 : 12727182-12731576 : positive
Gene Family Information
- ID HOM05D000246
- #Genes/#Species 1713/100
- Phylogenetic origin
- ID ORTHO05D007179
- #Genes/#Species 133/85
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id AL6G39350.v2.1
- synonym fgenesh2_kg.6__2694__AT5G27680.1
- synonym 489560
- pacid 35928540
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT5G27680 |
| GO:0032508 | ISO | PLAZA Integrative Orthology | DNA duplex unwinding | AT5G27680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0043138 | ISO | PLAZA Integrative Orthology | 3'-5' DNA helicase activity | AT5G27680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004589 | DNA helicase, ATP-dependent, RecQ type |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR009060 | UBA-like superfamily |
| IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |