Gene: PGR031G3950

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR031G3950
  • Transcript Identifier PGR031G3950.03
  • Gene Type Coding gene
  • Location NC_045127.1 : 52567714-52572605 : positive

Gene Family Information

  • ID HOM05D000246
  • #Genes/#Species 1713/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031378002.1
  • name LOC116193323
  • name XM_031522142.1
  • id gene-LOC116193323
  • uniprot A0A6P8CAC8

Descriptions

  • product ATP-dependent DNA helicase Q-like SIM, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G27680
GO:0032508
ISO
PLAZA Integrative OrthologyDNA duplex unwinding AT5G27680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
InterProprotein binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0043138
ISO
PLAZA Integrative Orthology3'-5' DNA helicase activity AT5G27680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015940 Ubiquitin-associated domain
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR009060 UBA-like superfamily
Mapman id Description
35.1 not assigned.annotated