Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.4e-116 422.9 215 100.0
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 2.2e-88 329.3 169 98.8
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 1.8e-82 309.7 169 91.7
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 3.8e-77 292.0 169 84.0
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 7.2e-76 287.7 169 82.8
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 1.3e-72 276.9 162 84.6
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.4e-71 273.5 169 76.3
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 1.2e-67 260.4 169 75.1
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 8.0e-67 257.7 169 74.6
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 3.0e-66 255.8 168 75.0
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 8.8e-66 254.2 171 73.1
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 8.8e-66 254.2 170 75.3
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 5.7e-65 251.5 171 73.1
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 5.7e-65 251.5 171 73.7
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 7.5e-65 251.1 171 72.5
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 2.2e-64 249.6 171 71.3
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 2.8e-64 249.2 170 71.8
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 2.8e-64 249.2 170 72.9
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 3.7e-64 248.8 171 72.5
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 6.3e-64 248.1 171 70.2
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 8.3e-64 247.7 170 70.6
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 8.3e-64 247.7 170 71.2
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.1e-63 247.3 170 70.6
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 1.4e-63 246.9 171 70.8
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 1.4e-63 246.9 167 72.5
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.4e-63 246.9 167 72.5
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.8e-63 246.5 171 73.1
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.8e-63 246.5 168 71.4
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 1.8e-63 246.5 171 71.3
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 3.1e-63 245.7 169 71.6
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 4.1e-63 245.4 171 71.3
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 5.4e-63 245.0 167 71.3
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 5.4e-63 245.0 171 72.5
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 9.2e-63 244.2 171 70.8
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 9.2e-63 244.2 171 70.2
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.2e-62 243.8 167 71.9
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 2.0e-62 243.0 167 72.5
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 2.7e-62 242.7 171 69.6
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.5e-62 242.3 168 70.8
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 3.5e-62 242.3 171 71.9
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 4.5e-62 241.9 171 70.2
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.7e-61 240.0 171 69.6
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 1.7e-61 240.0 170 71.2
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 2.3e-61 239.6 172 69.2
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 2.9e-61 239.2 171 70.2
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.9e-61 239.2 171 70.8
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 2.9e-61 239.2 170 69.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 3.8e-61 238.8 171 67.8
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 5.0e-61 238.4 171 67.8
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 6.6e-61 238.0 171 67.3
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 6.6e-61 238.0 168 71.4
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.1e-60 237.3 171 69.6
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 1.9e-60 236.5 171 65.5
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 2.5e-60 236.1 171 70.8
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 2.5e-60 236.1 171 70.2
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 2.5e-60 236.1 171 70.8
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 2.5e-60 236.1 170 67.1
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 5.6e-60 235.0 171 69.0
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 7.3e-60 234.6 171 69.6
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 7.3e-60 234.6 170 70.0
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 1.2e-59 233.8 172 68.0
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.8e-59 232.6 171 69.6
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.8e-59 232.6 171 69.6
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.8e-59 232.6 171 69.6
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 2.8e-59 232.6 170 69.4
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.6e-59 232.3 168 70.2
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 4.7e-59 231.9 171 67.8
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 6.1e-59 231.5 171 68.4
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 6.1e-59 231.5 171 67.3
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 8.0e-59 231.1 159 71.1
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.0e-58 230.7 171 68.4
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.4e-58 230.3 169 67.5
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 4.0e-58 228.8 168 70.2
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 6.8e-58 228.0 170 66.5
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 8.9e-58 227.6 171 67.3
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 8.9e-58 227.6 170 67.6
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 1.5e-57 226.9 173 66.5
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 2.6e-57 226.1 227 54.6
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 4.4e-57 225.3 170 65.3
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 9.8e-57 224.2 168 68.5
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 3.7e-56 222.2 171 66.1
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 5.9e-54 214.9 168 62.5
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.0e-53 214.2 170 64.1
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 4.3e-52 208.8 170 59.4
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.6e-51 206.8 135 76.3
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 8.0e-51 204.5 146 71.2
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.4e-50 203.8 172 59.9
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 3.1e-50 202.6 140 70.7
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.2e-50 201.8 164 62.2
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 8.9e-50 201.1 175 61.7
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 2.6e-49 199.5 166 64.5
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 2.6e-49 199.5 169 64.5
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 3.7e-48 195.7 142 64.8
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 4.9e-48 195.3 168 61.9
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.4e-47 191.8 147 63.9
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 2.0e-46 189.9 172 56.4
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.7e-45 186.8 174 54.0
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 1.9e-44 183.3 142 61.3
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 1.2e-41 174.1 143 62.9
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 2.0e-41 173.3 172 52.3
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 3.7e-40 169.1 166 54.2
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 4.9e-40 168.7 136 64.7
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 4.9e-40 168.7 198 53.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 6.0e-38 161.8 172 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 8.1e-35 151.4 172 44.2
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.8e-34 150.2 146 54.8
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 2.9e-32 142.9 175 41.1
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.0e-29 134.4 142 51.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 1.4e-26 124.0 192 35.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 6.4e-24 115.2 94 59.6
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 5.1e-13 79.0 48 72.9
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 3.2e-07 59.7 195 27.2
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 9.3e-07 58.2 156 28.8
SHI03977 Sapria himalayana HOM05D004944 ORTHO05D005989 3.5e-06 56.2 118 33.9


User provided reference genes

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