Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g009140.1 Solanum lycopersicum HOM05D000399 ORTHO05D000304 8.7e-57 223.4 112 100.0
Solyc01g012560.1 Solanum lycopersicum HOM05D000399 ORTHO05D391856 8.8e-17 90.5 53 88.7
PGSC0003DMG400016641 Solanum tuberosum HOM05D000399 ORTHO05D000304 7.0e-14 80.9 77 55.8
Sopen06g015290 Solanum pennellii HOM05D000399 ORTHO05D000304 1.6e-13 79.7 77 55.8
Solyc06g048960.4 Solanum lycopersicum HOM05D000399 ORTHO05D000304 7.7e-13 77.4 77 54.5
CAN.G321.26 Capsicum annuum HOM05D000399 ORTHO05D000304 3.8e-12 75.1 75 54.7
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 5.0e-12 74.7 97 48.5
CAN.G321.25 Capsicum annuum HOM05D000399 ORTHO05D000304 3.2e-11 72.0 77 49.4
Solyc11g008530.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 7.2e-11 70.9 77 48.1
Solyc11g008540.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 1.2e-10 70.1 82 51.2
Solyc11g008520.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 2.1e-10 69.3 95 46.3
Sopen11g004330 Solanum pennellii HOM05D000399 ORTHO05D000304 2.7e-10 68.9 77 50.6
Nitab4.5_0001003g0020 Nicotiana tabacum HOM05D000399 ORTHO05D000304 1.0e-09 67.0 77 46.8
Peaxi162Scf00296g00099 Petunia axillaris HOM05D000399 ORTHO05D000304 1.4e-09 66.6 77 46.8
Nitab4.5_0019786g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 1.8e-09 66.2 77 44.2
Actinidia34702 Actinidia chinensis HOM05D000399 ORTHO05D000304 4.0e-09 65.1 77 41.6
Lalb_Chr18g0058051 Lupinus albus HOM05D000399 ORTHO05D000304 1.2e-08 63.5 79 39.2
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 2.0e-08 62.8 82 40.2
Rhsim05G0165200 Rhododendron simsii HOM05D000399 ORTHO05D000304 3.4e-08 62.0 82 40.2
Lj1g0009784 Lotus japonicus HOM05D000399 ORTHO05D000304 4.4e-08 61.6 78 43.6
Dinv21364 Davidia involucrata HOM05D000399 ORTHO05D000304 1.3e-07 60.1 77 39.0
Lalb_Chr20g0120111 Lupinus albus HOM05D000399 ORTHO05D000304 1.3e-07 60.1 79 38.0
vmacro19543 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 1.3e-07 60.1 77 37.7
Glyma.19G254900 Glycine max HOM05D000399 ORTHO05D000304 2.2e-07 59.3 78 42.3
Potri.008G075900 Populus trichocarpa HOM05D000399 ORTHO05D000304 2.2e-07 59.3 78 37.2
Haze_04593 Corylus avellana HOM05D000399 ORTHO05D008029 2.8e-07 58.9 77 40.3
Actinidia34701 Actinidia chinensis HOM05D000399 ORTHO05D000304 3.7e-07 58.5 77 39.0
Eucgr.B01461 Eucalyptus grandis HOM05D000399 ORTHO05D000304 3.7e-07 58.5 77 39.0
FAN09G4083 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.7e-07 58.5 82 40.2
VMungo0540G2272 Vigna mungo HOM05D000399 ORTHO05D000304 4.8e-07 58.2 78 43.6
GSVIVG01019052001 Vitis vinifera HOM05D000399 ORTHO05D000304 4.8e-07 58.2 82 40.2
Cfa006239 Carpinus fangiana HOM05D000399 ORTHO05D000304 6.3e-07 57.8 82 39.0
Glyma.09G025400 Glycine max HOM05D000399 ORTHO05D000304 8.3e-07 57.4 77 40.3
TWI36G1251 Tripterygium wilfordii HOM05D000399 ORTHO05D000304 8.3e-07 57.4 97 35.1
Sabra10G0139100 Salix brachista HOM05D000399 ORTHO05D000304 1.1e-06 57.0 77 36.4
Sc06g0004990 Simmondsia chinensis HOM05D000399 ORTHO05D000304 1.1e-06 57.0 75 38.7
MSTRG.8199 Avicennia marina HOM05D000399 ORTHO05D000304 1.4e-06 56.6 77 37.7
CiPaw.08G113600 Carya illinoinensis HOM05D000399 ORTHO05D000304 1.4e-06 56.6 77 41.6
HanXRQChr16g0511821 Helianthus annuus HOM05D000399 ORTHO05D000304 1.4e-06 56.6 78 35.9
PGR031G1259 Punica granatum HOM05D000399 ORTHO05D000304 1.4e-06 56.6 82 35.4
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 1.4e-06 56.6 77 37.7
ECA232G2408 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.4e-06 55.8 77 36.4
Phvul.006G127200 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 2.4e-06 55.8 82 39.0
Sabra08G0056600 Salix brachista HOM05D000399 ORTHO05D000304 2.4e-06 55.8 73 39.7
vmacro19578 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 2.4e-06 55.8 77 36.4
CANSAT54G0243 Cannabis sativa HOM05D000399 ORTHO05D000304 3.1e-06 55.5 79 40.5
CiPaw.08G113700 Carya illinoinensis HOM05D000399 ORTHO05D000304 3.1e-06 55.5 77 40.3
Cc09_g03980 Coffea canephora HOM05D000399 ORTHO05D000304 3.1e-06 55.5 77 37.7
arahy.Tifrunner.gnm1.ann1.5JB048 Arachis hypogaea HOM05D000399 ORTHO05D000304 5.4e-06 54.7 78 37.2
Cfa019273 Carpinus fangiana HOM05D000399 ORTHO05D000304 5.4e-06 54.7 82 37.8
Ca_00852_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 5.4e-06 54.7 71 39.4
Haze_07648 Corylus avellana HOM05D000399 ORTHO05D000304 5.4e-06 54.7 82 37.8
Oeu034687.1 Olea europaea HOM05D000399 ORTHO05D000304 5.4e-06 54.7 77 35.1
Potri.010G181400 Populus trichocarpa HOM05D000399 ORTHO05D000304 5.4e-06 54.7 71 39.4
Thecc.05G187300 Theobroma cacao HOM05D000399 ORTHO05D000304 5.4e-06 54.7 82 36.6
arahy.Tifrunner.gnm1.ann1.3LM8QV Arachis hypogaea HOM05D000399 ORTHO05D000304 7.0e-06 54.3 78 37.2
Cfa006237 Carpinus fangiana HOM05D000399 ORTHO05D000304 7.0e-06 54.3 82 39.0
Ciclev10010911m.g Citrus clementina HOM05D000399 ORTHO05D000304 9.1e-06 53.9 72 38.9
Dinv21363 Davidia involucrata HOM05D000399 ORTHO05D000304 9.1e-06 53.9 91 36.3
Lsat_1_v5_gn_0_14701 Lactuca sativa HOM05D000399 ORTHO05D000304 9.1e-06 53.9 77 32.5
Lj2C165T13 Lonicera japonica HOM05D000399 ORTHO05D000304 9.1e-06 53.9 82 39.0
Manes.12G002800 Manihot esculenta HOM05D000399 ORTHO05D000304 9.1e-06 53.9 73 39.7
Phvul.006G111800 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 9.1e-06 53.9 95 36.8
PGR031G2252 Punica granatum HOM05D000399 ORTHO05D000304 9.1e-06 53.9 82 35.4
TPR.G29787 Trifolium pratense HOM05D000399 ORTHO05D000304 9.1e-06 53.9 110 30.9


User provided reference genes

Program Settings