Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 1.3e-230 802.7 413 100.0
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 2.1e-217 758.8 411 91.7
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 8.9e-216 753.4 411 91.0
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 2.3e-203 712.2 408 86.3
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 1.1e-202 709.9 409 86.3
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 2.5e-202 708.8 408 86.5
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 3.3e-202 708.4 412 87.1
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 4.3e-202 708.0 409 85.8
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 1.3e-201 706.4 407 86.2
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 2.8e-201 705.3 410 86.1
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 3.6e-201 704.9 410 86.1
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 8.1e-201 703.7 408 86.3
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 8.1e-201 703.7 413 84.3
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 8.1e-201 703.7 412 85.9
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 2.4e-200 702.2 413 85.5
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 2.4e-200 702.2 413 85.5
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 4.0e-200 701.4 410 85.4
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 5.3e-200 701.0 410 85.1
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 1.2e-199 699.9 415 85.8
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 1.5e-199 699.5 412 85.4
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 2.0e-199 699.1 410 85.6
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 7.6e-199 697.2 409 88.8
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 1.3e-198 696.4 408 84.6
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 1.7e-198 696.0 408 84.6
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 2.2e-198 695.7 412 85.7
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 2.9e-198 695.3 412 84.5
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 4.9e-198 694.5 409 85.8
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 4.9e-198 694.5 410 86.3
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 6.4e-198 694.1 417 83.5
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 6.4e-198 694.1 424 84.0
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 6.4e-198 694.1 410 85.9
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 8.4e-198 693.7 406 86.2
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 1.4e-197 693.0 410 86.1
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 1.4e-197 693.0 408 85.8
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 1.9e-197 692.6 427 82.7
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.9e-197 692.6 408 84.1
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 2.4e-197 692.2 407 86.2
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 3.2e-197 691.8 406 86.0
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 3.2e-197 691.8 406 86.0
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 3.2e-197 691.8 409 84.6
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 5.4e-197 691.0 406 86.0
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 5.4e-197 691.0 406 85.7
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 7.1e-197 690.6 409 83.4
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 9.3e-197 690.3 412 85.9
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 1.6e-196 689.5 408 84.6
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 1.6e-196 689.5 405 86.7
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 2.1e-196 689.1 408 84.8
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 4.6e-196 688.0 416 83.7
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 2.3e-195 685.6 412 84.2
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 3.0e-195 685.3 409 83.9
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 3.9e-195 684.9 409 84.4
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 3.9e-195 684.9 408 83.8
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 3.9e-195 684.9 408 83.8
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 3.9e-195 684.9 424 83.5
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 5.1e-195 684.5 411 84.4
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 1.1e-194 683.3 409 83.9
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 3.3e-194 681.8 421 84.1
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 4.3e-194 681.4 353 94.1
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 1.3e-193 679.9 412 83.3
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 1.3e-193 679.9 407 83.0
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 2.1e-193 679.1 353 93.8
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 6.2e-193 677.6 409 84.1
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 6.2e-193 677.6 411 84.2
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 8.1e-193 677.2 410 84.9
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 8.1e-193 677.2 410 84.9
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 1.1e-192 676.8 412 84.7
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 1.4e-192 676.4 421 81.2
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 2.4e-192 675.6 410 84.6
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 4.0e-192 674.9 414 84.3
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 4.0e-192 674.9 414 84.3
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 4.0e-192 674.9 409 85.3
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 5.3e-192 674.5 409 83.9
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 5.3e-192 674.5 409 83.9
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 5.3e-192 674.5 413 83.8
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 6.9e-192 674.1 409 82.6
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 1.2e-191 673.3 414 82.4
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 1.2e-191 673.3 414 83.8
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 1.2e-191 673.3 414 83.6
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 1.5e-191 672.9 414 83.1
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 1.5e-191 672.9 414 83.3
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 2.0e-191 672.5 414 83.1
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 2.0e-191 672.5 412 85.2
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 2.6e-191 672.2 371 89.2
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 3.4e-191 671.8 414 83.8
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 5.8e-191 671.0 414 82.9
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 5.8e-191 671.0 414 81.9
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 4.9e-190 667.9 413 83.3
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 4.9e-190 667.9 413 84.3
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 6.4e-190 667.5 414 83.3
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 1.1e-189 666.8 412 82.8
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 1.9e-189 666.0 409 81.4
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 1.9e-189 666.0 409 79.7
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 2.4e-189 665.6 353 91.2
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 5.4e-189 664.5 409 81.2
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 5.4e-189 664.5 411 81.8
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 9.3e-189 663.7 414 83.3
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 2.7e-188 662.1 411 83.7
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 4.6e-188 661.4 412 82.5
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 4.6e-188 661.4 432 80.1
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 1.3e-187 659.8 418 81.8
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 5.1e-187 657.9 354 89.5
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 6.7e-187 657.5 410 80.7
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 1.5e-186 656.4 415 80.2
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 1.6e-185 652.9 419 81.1
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 2.8e-185 652.1 366 88.0
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 8.1e-185 650.6 400 83.0
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 9.6e-178 627.1 333 91.3
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 2.0e-175 619.4 354 83.3
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 2.0e-175 619.4 380 84.7
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 1.0e-174 617.1 354 83.9
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 1.4e-173 613.2 354 83.1
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 9.3e-173 610.5 409 78.0
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 6.1e-172 607.8 410 76.1
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 2.5e-170 602.4 353 80.7
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 7.7e-159 564.3 401 73.6
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 5.0e-158 561.6 344 83.4
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 3.7e-153 545.4 336 84.8
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 1.8e-152 543.1 325 86.5
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 6.5e-150 534.6 320 85.3
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 7.2e-149 531.2 353 72.2
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 3.6e-148 528.9 400 65.5
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 1.0e-147 527.3 291 89.7
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 3.8e-142 508.8 318 80.8
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 1.6e-140 503.4 406 67.5
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.8e-139 500.0 324 75.6
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 7.5e-138 494.6 345 70.1
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 3.5e-135 485.7 412 63.1
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 7.7e-135 484.6 305 83.9
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 1.4e-131 473.8 379 62.3
SalBow6G0122 Salvia bowleyana HOM05D004558 ORTHO05D005647 1.9e-125 453.4 248 88.3
SalBow1G4785 Salvia bowleyana HOM05D004558 ORTHO05D005647 8.6e-118 427.9 285 76.1
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.0e-114 416.8 283 74.2
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 2.1e-103 380.2 233 78.5
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 1.9e-96 357.1 323 60.4
BolC4t25242H Brassica oleracea HOM05D004558 ORTHO05D005647 9.0e-59 231.9 132 85.6
C04p35620 Brassica napus HOM05D004558 ORTHO05D005647 1.2e-58 231.5 132 84.8
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 3.6e-55 219.9 354 38.7
SEGI_05566 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 5.0e-49 199.5 118 82.2
SEGI_20922 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 6.5e-49 199.1 118 81.4
C08p32210 Brassica napus HOM05D004558 ORTHO05D005647 9.1e-43 178.7 104 85.6
A04p03620 Brassica napus HOM05D004558 ORTHO05D005647 4.5e-42 176.4 103 85.4
BraA04t16073Z Brassica rapa HOM05D004558 ORTHO05D005647 4.5e-42 176.4 103 85.4
BcaC02g09879 Brassica carinata HOM05D004558 ORTHO05D005647 1.7e-36 157.9 94 83.0
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.7e-36 157.9 103 75.7
CDE02G4696 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.9e-33 147.1 94 77.7
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 6.3e-28 129.4 99 67.7
BcaB02g08342 Brassica carinata HOM05D004558 ORTHO05D005647 8.2e-28 129.0 105 68.6
Ah.13g077400 Amaranthus hybridus HOM05D004558 ORTHO05D000435 5.0e-25 119.8 148 50.0
ClCG10G010310 Citrullus lanatus HOM05D004558 ORTHO05D005647 2.5e-24 117.5 71 74.6
ClCG10G010320 Citrullus lanatus HOM05D004558 ORTHO05D005647 4.0e-22 110.2 81 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis HOM05D004558 ORTHO05D005647 2.6e-21 107.5 59 86.4
MD00G1107700 Malus domestica HOM05D004558 ORTHO05D005647 1.1e-19 102.1 62 83.9
Lalb_Chr22g0358091 Lupinus albus HOM05D004558 ORTHO05D005647 5.4e-19 99.8 47 89.4
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis HOM05D004558 ORTHO05D000003 1.0e-17 95.5 59 81.4
SEGI_00644 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 7.5e-13 79.3 42 92.9
Lalb_Chr22g0358081 Lupinus albus HOM05D004558 ORTHO05D005647 3.1e-11 73.9 39 89.7
Lalb_Chr22g0358071 Lupinus albus HOM05D004558 ORTHO05D239964 9.5e-08 62.4 82 48.8
MSTRG.26191 Avicennia marina HOM05D004558 ORTHO05D087779 2.1e-07 61.2 53 62.3


User provided reference genes

Program Settings