Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020778 Sechium edule HOM05D005275 ORTHO05D006435 2.7e-118 428.7 219 100.0
Sed0013694 Sechium edule HOM05D005275 ORTHO05D006435 6.0e-110 401.0 219 91.3
ClCG05G009030 Citrullus lanatus HOM05D005275 ORTHO05D006435 3.9e-109 398.3 219 91.8
CsaV3_3G019750 Cucumis sativus L. HOM05D005275 ORTHO05D006435 4.7e-107 391.3 219 89.5
CiPaw.06G045000 Carya illinoinensis HOM05D005275 ORTHO05D006435 6.0e-86 321.2 219 74.0
Duzib114G0832 Durio zibethinus HOM05D005275 ORTHO05D006435 7.8e-86 320.9 219 74.9
CANSAT21G1202 Cannabis sativa HOM05D005275 ORTHO05D006435 1.0e-85 320.5 220 74.5
TWI39G0072 Tripterygium wilfordii HOM05D005275 ORTHO05D006435 1.9e-84 316.2 219 73.5
Cfa016214 Carpinus fangiana HOM05D005275 ORTHO05D006435 2.5e-84 315.8 220 72.3
COL.COLO4_38546 Corchorus olitorius HOM05D005275 ORTHO05D006435 5.6e-84 314.7 218 71.6
PGR042G0357 Punica granatum HOM05D005275 ORTHO05D006435 4.8e-83 311.6 219 71.7
QL09p007976 Quercus lobata HOM05D005275 ORTHO05D006435 1.4e-82 310.1 219 69.4
RcHm_v2.0_Chr1g0381511 Rosa chinensis HOM05D005275 ORTHO05D006435 9.0e-82 307.4 223 70.9
Cpa.g.sc69.87 Carica papaya HOM05D005275 ORTHO05D006435 1.3e-80 303.5 220 70.5
Eucgr.H01489 Eucalyptus grandis HOM05D005275 ORTHO05D006435 4.9e-80 301.6 219 70.8
Gohir.D05G289000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.2e-78 297.0 220 70.5
Gorai.009G304100 Gossypium raimondii HOM05D005275 ORTHO05D006435 1.2e-78 297.0 220 70.5
FAN10G0352 Fragaria x ananassa HOM05D005275 ORTHO05D006435 2.7e-78 295.8 219 67.6
Gohir.A05G287800 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.6e-78 295.0 220 70.5
Thecc.10G105800 Theobroma cacao HOM05D005275 ORTHO05D006435 7.9e-78 294.3 208 73.1
Gohir.A10G201500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.0e-77 293.9 220 69.5
Gohir.A11G223000 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.0e-77 293.9 220 69.5
Gohir.A12G028500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.0e-77 293.9 220 69.5
Gohir.A12G115900 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.3e-77 293.5 220 69.5
Manes.01G140200 Manihot esculenta HOM05D005275 ORTHO05D006435 1.7e-77 293.1 219 67.1
Gohir.D01G152400 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.9e-77 292.0 220 69.1
Gohir.D05G384500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 3.9e-77 292.0 220 69.1
Haze_00229 Corylus avellana HOM05D005275 ORTHO05D006435 8.7e-77 290.8 219 68.0
Gohir.A04G061600 Gossypium hirsutum HOM05D005275 ORTHO05D006435 8.7e-77 290.8 220 69.1
Potri.012G121228 Populus trichocarpa HOM05D005275 ORTHO05D006435 8.7e-77 290.8 220 66.4
Gohir.A08G051700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.5e-76 290.0 220 68.6
FAN01G0712 Fragaria x ananassa HOM05D000442 ORTHO05D007032 2.5e-76 289.3 214 67.8
Prupe.2G313400 Prunus persica HOM05D005275 ORTHO05D006435 3.3e-76 288.9 222 67.1
Potri.012G017300 Populus trichocarpa HOM05D005275 ORTHO05D006435 4.3e-76 288.5 220 66.4
Ciclev10022175m.g Citrus clementina HOM05D005275 ORTHO05D006435 7.4e-76 287.7 219 66.7
FAN10G2096 Fragaria x ananassa HOM05D000442 ORTHO05D007032 2.1e-75 286.2 212 67.9
MD07G1293600 Malus domestica HOM05D005275 ORTHO05D006435 2.1e-75 286.2 224 67.4
THA.LOC104811989 Tarenaya hassleriana HOM05D005275 ORTHO05D006435 2.8e-75 285.8 221 66.5
Lj3g0024506 Lotus japonicus HOM05D005275 ORTHO05D006435 4.8e-75 285.0 223 66.8
GSVIVG01038570001 Vitis vinifera HOM05D005275 ORTHO05D006435 4.8e-75 285.0 219 66.7
Nn8g39914 Nelumbo nucifera HOM05D005275 ORTHO05D006435 2.4e-74 282.7 219 67.1
Lalb_Chr22g0360521 Lupinus albus HOM05D005275 ORTHO05D006435 5.3e-74 281.6 224 65.6
TPR.G34143 Trifolium pratense HOM05D005275 ORTHO05D006435 9.0e-74 280.8 223 65.5
Glyma.06G288700 Glycine max HOM05D005275 ORTHO05D006435 2.0e-73 279.6 223 64.1
Psat7g227360 Pisum sativum HOM05D005275 ORTHO05D006435 2.0e-73 279.6 223 65.5
Ca_10483_v3 Cicer arietinum L. HOM05D005275 ORTHO05D006435 5.8e-73 278.1 223 65.5
Medtr5g038540 Medicago truncatula HOM05D005275 ORTHO05D006435 9.9e-73 277.3 223 65.0
Atru.chr1.1611 Acer truncatum HOM05D005275 ORTHO05D006435 1.3e-72 276.9 219 64.8
Glyma.19G085300 Glycine max HOM05D005275 ORTHO05D006435 1.7e-72 276.6 223 63.7
Phvul.008G150700 Phaseolus vulgaris HOM05D005275 ORTHO05D006435 3.8e-72 275.4 223 63.7
Glyma.16G061500 Glycine max HOM05D005275 ORTHO05D006435 2.4e-71 272.7 223 62.3
Sabra12G0015200 Salix brachista HOM05D005275 ORTHO05D007032 1.2e-70 270.4 249 58.2
EL10Ac3g05547 Beta vulgaris HOM05D005275 ORTHO05D006435 2.1e-70 269.6 221 64.3
arahy.Tifrunner.gnm1.ann1.T9K8GJ Arachis hypogaea HOM05D005275 ORTHO05D006435 2.7e-70 269.2 225 63.1
Medtr1g067700 Medicago truncatula HOM05D005275 ORTHO05D006435 3.5e-70 268.9 225 64.4
Carub.0008s1327 Capsella rubella HOM05D005275 ORTHO05D006435 4.6e-70 268.5 219 64.4
arahy.Tifrunner.gnm1.ann1.5IWG5U Arachis hypogaea HOM05D005275 ORTHO05D006435 1.3e-69 266.9 225 62.7
AL8G27700 Arabidopsis lyrata HOM05D005275 ORTHO05D006435 2.3e-69 266.2 219 62.6
arahy.Tifrunner.gnm1.ann1.AF7P3K Arachis hypogaea HOM05D005275 ORTHO05D006435 6.7e-69 264.6 225 60.4
CARHR266090 Cardamine hirsuta HOM05D005275 ORTHO05D006435 6.7e-69 264.6 219 63.0
Thhalv10014627m.g Eutrema salsugineum HOM05D005275 ORTHO05D006435 2.5e-68 262.7 218 61.9
AUR62002807 Chenopodium quinoa HOM05D005275 ORTHO05D006435 3.3e-68 262.3 221 62.0
HanXRQChr16g0505961 Helianthus annuus HOM05D005275 ORTHO05D006435 4.3e-68 261.9 219 63.5
CSS0019342 Camellia sinensis var. sinensis HOM05D005275 ORTHO05D006435 5.6e-68 261.5 225 64.4
Hma1.2p1_1507F.1_g287690 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 9.6e-68 260.8 216 64.4
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.6e-67 260.0 219 63.0
Aqoxy7G03390 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 2.1e-67 259.6 219 62.6
AT5G53070 Arabidopsis thaliana HOM05D005275 ORTHO05D006435 2.1e-67 259.6 219 61.6
MBI14_g34252_MAGBIO Magnolia biondii HOM05D005275 ORTHO05D006435 3.7e-67 258.8 219 62.1
MELO3C019369.2 Cucumis melo HOM05D005275 ORTHO05D006435 4.8e-67 258.5 148 88.5
PSO421G0063 Papaver somniferum HOM05D005275 ORTHO05D006435 4.8e-67 258.5 219 65.8
Lj8A623T20 Lonicera japonica HOM05D005275 ORTHO05D006435 6.2e-67 258.1 223 63.2
BcaC03g14459 Brassica carinata HOM05D005275 ORTHO05D006435 1.8e-66 256.5 218 61.5
Lsat_1_v5_gn_7_91160 Lactuca sativa HOM05D005275 ORTHO05D006435 1.8e-66 256.5 222 62.6
BcaB05g22006 Brassica carinata HOM05D000442 ORTHO05D007032 3.1e-66 255.8 218 61.0
Hund20626 Selenicereus undatus HOM05D005275 ORTHO05D006435 4.0e-66 255.4 216 60.6
Ciclev10023889m.g Citrus clementina HOM05D005275 ORTHO05D006435 6.9e-66 254.6 222 61.7
HanXRQChr04g0128021 Helianthus annuus HOM05D005275 ORTHO05D006435 1.2e-65 253.8 219 62.1
Sp6g15240 Schrenkiella parvula HOM05D005275 ORTHO05D006435 1.5e-65 253.4 218 60.6
BcaB08g35669 Brassica carinata HOM05D005275 ORTHO05D006435 3.4e-65 252.3 218 60.6
BcaC04g20510 Brassica carinata HOM05D005275 ORTHO05D006435 3.4e-65 252.3 218 60.1
A02p11320 Brassica napus HOM05D005275 ORTHO05D006435 3.4e-65 252.3 218 60.1
C09p42780 Brassica napus HOM05D005275 ORTHO05D006435 3.4e-65 252.3 218 60.1
Cc01_g04130 Coffea canephora HOM05D005275 ORTHO05D006435 7.6e-65 251.1 221 62.0
C02p18700 Brassica napus HOM05D005275 ORTHO05D006435 1.3e-64 250.4 218 60.1
A10p10560 Brassica napus HOM05D005275 ORTHO05D006435 1.7e-64 250.0 218 59.6
TAR374G1406 Trochodendron aralioides HOM05D005275 ORTHO05D006435 2.2e-64 249.6 186 68.8
BraA02t06194Z Brassica rapa HOM05D005275 ORTHO05D006435 2.9e-64 249.2 218 59.6
BraA10t43140Z Brassica rapa HOM05D005275 ORTHO05D006435 2.9e-64 249.2 218 59.2
Sopen05g023270 Solanum pennellii HOM05D005275 ORTHO05D006435 2.5e-63 246.1 230 56.1
Solyc05g032880.3 Solanum lycopersicum HOM05D005275 ORTHO05D006435 3.2e-63 245.7 230 56.1
BolC9t57154H Brassica oleracea HOM05D005275 ORTHO05D006435 5.5e-63 245.0 226 58.0
Gohir.D09G028700 Gossypium hirsutum HOM05D005275 ORTHO05D006435 7.1e-63 244.6 198 66.2
Peaxi162Scf00251g01010 Petunia axillaris HOM05D005275 ORTHO05D006435 7.1e-63 244.6 227 58.1
AUR62014115 Chenopodium quinoa HOM05D005275 ORTHO05D006435 9.3e-63 244.2 264 51.5
ECA236G4645 Erigeron canadensis HOM05D005275 ORTHO05D006435 9.3e-63 244.2 221 59.3
PSO675G7727 Papaver somniferum HOM05D005275 ORTHO05D006435 1.6e-62 243.4 210 63.3
Sc02g0003260 Simmondsia chinensis HOM05D005275 ORTHO05D006435 1.6e-62 243.4 235 56.6
Actinidia34231 Actinidia chinensis HOM05D005275 ORTHO05D006435 2.7e-62 242.7 208 63.5
Ah.13g074120 Amaranthus hybridus HOM05D000770 ORTHO05D000586 3.5e-62 242.3 233 58.4
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 6.0e-62 241.5 185 68.1
BolC2t08015H Brassica oleracea HOM05D005275 ORTHO05D006435 1.0e-61 240.7 232 56.5
vmacro06395 Vaccinium macrocarpon HOM05D005275 ORTHO05D006435 1.8e-61 240.0 255 55.3
DCAR_008951 Daucus carota HOM05D005275 ORTHO05D006435 1.1e-60 237.3 219 58.9
Oeu060995.2 Olea europaea HOM05D005275 ORTHO05D006435 4.3e-60 235.3 219 56.6
Nitab4.5_0004499g0010 Nicotiana tabacum HOM05D005275 ORTHO05D006435 1.8e-58 229.9 216 56.0
MSTRG.48 Avicennia marina HOM05D005275 ORTHO05D006435 4.1e-58 228.8 219 56.2
Nitab4.5_0000006g0650 Nicotiana tabacum HOM05D005275 ORTHO05D006435 9.0e-58 227.6 218 56.4
SHI02356 Sapria himalayana HOM05D005275 ORTHO05D006435 9.0e-58 227.6 234 52.6
Rhsim03G0210600 Rhododendron simsii HOM05D005275 ORTHO05D006435 1.2e-57 227.3 266 52.3
Gohir.A07G020100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 4.5e-57 225.3 166 69.9
Peaxi162Scf00581g00021 Petunia axillaris HOM05D005275 ORTHO05D006435 5.9e-57 224.9 257 51.0
ATR0564G295 Amborella trichopoda HOM05D005275 ORTHO05D006435 1.7e-56 223.4 204 59.3
Actinidia08664 Actinidia chinensis HOM05D005275 ORTHO05D006435 3.8e-56 222.2 185 64.3
HPP92_008880 Vanilla planifolia HOM05D005275 ORTHO05D006435 5.0e-56 221.9 215 57.2
Migut.F01020 Erythranthe guttata HOM05D005275 ORTHO05D006435 8.5e-56 221.1 219 54.8
arahy.Tifrunner.gnm1.ann1.G3VF9V Arachis hypogaea HOM05D005275 ORTHO05D006435 2.3e-53 213.0 349 39.3
CDE01G0034 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 2.3e-53 213.0 223 52.0
Os05g0528900 Oryza sativa ssp. japonica HOM05D005275 ORTHO05D006435 9.7e-52 207.6 197 56.9
Gohir.A10G000100 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.1e-50 204.1 151 72.2
Zm00001eb199670 Zea mays HOM05D005275 ORTHO05D006435 9.1e-50 201.1 252 47.6
Lj1C1021T21 Lonicera japonica HOM05D005275 ORTHO05D006435 7.7e-49 198.0 214 54.7
SGA_v2.0_scaffold55G19785 Striga asiatica HOM05D005275 ORTHO05D006435 9.4e-47 191.0 194 54.6
VMungo1383G0294 Vigna mungo HOM05D005275 ORTHO05D006435 6.1e-46 188.3 168 58.9
Gohir.A12G032500 Gossypium hirsutum HOM05D005275 ORTHO05D006435 1.0e-45 187.6 148 66.2
CDE02G4591 Ceratophyllum demersum HOM05D005275 ORTHO05D006435 4.4e-44 182.2 190 56.3
FvH4_7g32000 Fragaria vesca HOM05D005275 ORTHO05D006435 4.8e-43 178.7 138 68.1
Duzib128G1952 Durio zibethinus HOM05D005275 ORTHO05D006435 6.3e-43 178.3 139 71.2
PGSC0003DMG400005324 Solanum tuberosum HOM05D005275 ORTHO05D006435 8.5e-40 167.9 175 52.6
Hma1.2p1_1507F.1_g287680 Hydrangea macrophylla HOM05D005275 ORTHO05D006435 1.4e-39 167.2 134 66.4
Sc20g0002940 Simmondsia chinensis HOM05D005275 ORTHO05D006435 1.4e-37 160.6 146 59.6
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 3.3e-36 156.0 118 72.9
Dinv21061 Davidia involucrata HOM05D005275 ORTHO05D006435 2.2e-35 153.3 97 79.4
Aa31LG3G9400 Aethionema arabicum HOM05D005275 ORTHO05D006435 1.4e-34 150.6 125 68.0
unitig_62.g23847 Utricularia gibba HOM05D002066 ORTHO05D001617 2.9e-32 142.9 127 62.2
Ciclev10024016m.g Citrus clementina HOM05D005275 ORTHO05D006435 1.3e-27 127.5 94 68.1
Pp3c9_14000 Physcomitrium patens HOM05D005275 ORTHO05D006435 1.4e-26 124.0 193 40.4
Oeu037051.1 Olea europaea HOM05D005275 ORTHO05D006435 3.1e-26 122.9 127 52.0
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 3.1e-26 122.9 186 39.2
CBR_g30099 Chara braunii HOM05D005275 ORTHO05D006435 1.0e-24 117.9 200 38.0
Mapoly0074s0056 Marchantia polymorpha HOM05D005275 ORTHO05D006435 1.0e-24 117.9 182 39.0
SEGI_07593 Sequoiadendron giganteum HOM05D005275 ORTHO05D006435 2.3e-21 106.7 91 61.5
Lsat_1_v5_gn_9_70281 Lactuca sativa HOM05D005275 ORTHO05D006435 1.5e-20 104.0 151 45.0
Sc21g0003940 Simmondsia chinensis HOM05D007402 ORTHO05D003673 9.8e-20 101.3 163 41.1
Ciclev10023389m.g Citrus clementina HOM05D005275 ORTHO05D006435 3.7e-19 99.4 68 70.6
Zm00001eb397120 Zea mays HOM05D005275 ORTHO05D006435 2.0e-17 93.6 95 53.7
Zm00001eb089870 Zea mays HOM05D005275 ORTHO05D006435 3.8e-16 89.4 95 51.6
QL09p008105 Quercus lobata HOM05D005275 ORTHO05D006435 2.8e-14 83.2 50 76.0
AagrBONN_evm.TU.Sc2ySwM_228.762 Anthoceros agrestis HOM05D005275 ORTHO05D006435 4.0e-13 79.3 139 38.1
Aqoxy2G00110 Aquilegia oxysepala HOM05D005275 ORTHO05D006435 1.3e-08 64.3 59 55.9
MCO07G577 Micromonas commoda HOM05D005275 ORTHO05D006435 1.7e-08 63.9 184 33.7
arahy.Tifrunner.gnm1.ann1.6AA68Y Arachis hypogaea HOM05D001355 ORTHO05D006435 4.7e-06 55.8 71 50.7


User provided reference genes

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