Gene: AT5G53070

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G53070
  • Transcript Identifier AT5G53070.1
  • Gene Type Coding gene
  • Location Chr5 : 21518837-21520167 : positive

Gene Family Information

  • ID HOM05D005275
  • #Genes/#Species 143/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G53070.1
  • uniprot Q9LVU5

Descriptions

  • Description Ribosomal protein L9/RNase H1
  • Computational description Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0019843
IEA
GOA DatabaserRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IBA
Gene Ontologymitochondrion1
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036791 Ribosomal protein L9, C-terminal domain superfamily
IPR020069 Ribosomal protein L9, C-terminal
IPR036935 Ribosomal protein L9, N-terminal domain superfamily
IPR009027 Ribosomal protein L9/RNase H1, N-terminal
IPR020070 Ribosomal protein L9, N-terminal
IPR000244 Ribosomal protein L9
Mapman id Description
17.7.1.1.9 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL9