Gene: FAN10G2096
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN10G2096
- Transcript Identifier FAN10G2096.1
- Gene Type Coding gene
- Location Fvb7-1 : 31313666-31320169 : negative
Gene Family Information
- ID HOM05D000442
- #Genes/#Species 1174/100
- Phylogenetic origin
- ID ORTHO05D007032
- #Genes/#Species 135/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id snap_masked-Fvb7-1-processed-gene-313.51.v1.0.a1
- pacid 50487618
Descriptions
- Description PF00013//PF01281 - KH domain (KH_1) // Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010286 | ISO | PLAZA Integrative Orthology | heat acclimation | AT5G53060 |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT5G53060 |
| GO:0031053 | ISO | PLAZA Integrative Orthology | primary miRNA processing | AT5G53060 |
| GO:0006970 | ISO | PLAZA Integrative Orthology | response to osmotic stress | AT5G53060 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT5G53060 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT5G53060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G53060 |
| GO:0070878 | ISO | PLAZA Integrative Orthology | primary miRNA binding | AT5G53060 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010445 | ISO | PLAZA Integrative Orthology | nuclear dicing body | AT5G53060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036791 | Ribosomal protein L9, C-terminal domain superfamily |
| IPR020070 | Ribosomal protein L9, N-terminal |
| IPR004088 | K Homology domain, type 1 |
| IPR036612 | K Homology domain, type 1 superfamily |
| IPR009027 | Ribosomal protein L9/RNase H1, N-terminal |
| IPR004087 | K Homology domain |
| IPR036935 | Ribosomal protein L9, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 17.7.1.1.9 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL9 |