Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 8.2e-156 553.9 325 100.0
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 1.4e-134 483.4 326 87.1
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.8e-134 483.0 321 88.2
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 4.4e-133 478.4 326 86.5
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.2e-124 449.5 302 88.7
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 1.2e-114 417.2 328 75.3
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 2.7e-114 416.0 328 75.9
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 2.2e-113 412.9 328 73.8
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 6.5e-113 411.4 330 73.6
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 1.1e-112 410.6 330 73.0
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 1.1e-112 410.6 325 76.0
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 1.5e-112 410.2 327 75.2
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 1.9e-112 409.8 299 79.6
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 3.2e-112 409.1 325 75.1
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 3.2e-112 409.1 336 72.6
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 4.2e-112 408.7 325 74.8
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 4.2e-112 408.7 326 72.7
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 5.5e-112 408.3 268 85.1
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 7.2e-112 407.9 325 73.2
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 1.2e-111 407.1 327 73.4
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 1.2e-111 407.1 326 75.2
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.1e-111 406.4 325 75.1
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 2.1e-111 406.4 333 73.0
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 2.1e-111 406.4 343 72.0
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 2.7e-111 406.0 336 71.1
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.7e-111 406.0 325 73.2
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 3.6e-111 405.6 325 74.5
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 3.6e-111 405.6 325 71.7
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 3.6e-111 405.6 313 76.7
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 4.7e-111 405.2 325 74.2
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 4.7e-111 405.2 326 73.3
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 6.1e-111 404.8 328 73.5
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 8.0e-111 404.4 328 71.6
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.0e-110 404.1 318 75.8
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 1.4e-110 403.7 311 74.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 1.8e-110 403.3 328 71.6
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.8e-110 403.3 325 72.6
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 1.8e-110 403.3 328 73.2
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 1.8e-110 403.3 327 72.5
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 2.3e-110 402.9 331 73.1
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 4.0e-110 402.1 325 72.3
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 4.0e-110 402.1 280 80.7
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 5.2e-110 401.7 325 75.4
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 1.2e-109 400.6 290 78.6
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.6e-109 399.4 330 73.9
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 2.6e-109 399.4 336 72.9
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 4.4e-109 398.7 327 73.4
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 4.4e-109 398.7 329 72.6
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.4e-109 398.7 303 76.9
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 5.7e-109 398.3 326 72.1
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 7.5e-109 397.9 308 75.0
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 1.3e-108 397.1 333 72.7
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 2.2e-108 396.4 289 81.3
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 2.2e-108 396.4 327 71.9
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 2.2e-108 396.4 330 72.1
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.8e-108 396.0 316 75.0
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 3.7e-108 395.6 332 73.2
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.7e-108 395.6 328 71.3
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.9e-108 395.2 332 71.7
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 6.3e-108 394.8 318 73.0
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 8.3e-108 394.4 325 73.8
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 8.3e-108 394.4 339 69.6
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.4e-107 393.7 330 71.2
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 1.4e-107 393.7 337 72.1
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.4e-107 393.7 325 73.8
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.8e-107 393.3 329 70.5
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 1.8e-107 393.3 257 85.6
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 3.1e-107 392.5 331 70.1
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 4.1e-107 392.1 259 83.8
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 4.1e-107 392.1 325 70.8
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 5.4e-107 391.7 334 71.6
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.4e-107 391.7 326 76.1
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 5.4e-107 391.7 326 76.1
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 5.4e-107 391.7 325 71.4
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 9.2e-107 391.0 328 71.3
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.2e-106 390.6 314 74.2
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 4.5e-106 388.7 328 71.3
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 4.5e-106 388.7 322 71.4
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 1.3e-105 387.1 330 71.8
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 1.7e-105 386.7 291 75.3
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 1.7e-105 386.7 315 72.1
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 1.7e-105 386.7 267 81.3
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 1.7e-105 386.7 315 72.1
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.7e-105 386.7 322 71.1
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.7e-105 386.7 323 73.1
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 1.7e-105 386.7 326 71.5
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 2.3e-105 386.3 263 82.9
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 2.9e-105 386.0 328 70.7
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 2.9e-105 386.0 386 63.5
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 3.8e-105 385.6 331 68.9
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 8.6e-105 384.4 267 80.9
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 2.5e-104 382.9 320 70.3
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 3.3e-104 382.5 325 71.4
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 3.3e-104 382.5 325 71.4
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.3e-104 382.5 329 69.3
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 5.6e-104 381.7 326 69.3
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 5.6e-104 381.7 327 71.3
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 7.3e-104 381.3 267 79.4
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 7.3e-104 381.3 328 70.7
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 9.5e-104 380.9 323 71.8
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 9.5e-104 380.9 329 69.9
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.2e-103 380.6 327 70.9
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 1.2e-103 380.6 328 70.4
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 1.6e-103 380.2 326 70.2
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.6e-103 380.2 327 69.4
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 2.1e-103 379.8 330 68.5
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 2.8e-103 379.4 293 74.4
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 2.8e-103 379.4 327 70.9
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 3.6e-103 379.0 329 68.7
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 3.6e-103 379.0 329 69.6
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 6.1e-103 378.3 256 74.6
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 8.0e-103 377.9 331 69.8
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 2.3e-102 376.3 262 81.3
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 2.3e-102 376.3 241 88.4
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 3.0e-102 375.9 312 70.8
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 3.0e-102 375.9 326 69.6
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 4.0e-102 375.6 284 75.4
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 5.2e-102 375.2 323 67.8
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 5.2e-102 375.2 321 69.2
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 6.8e-102 374.8 327 69.4
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 6.8e-102 374.8 331 70.4
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 6.8e-102 374.8 329 68.4
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-101 374.0 326 68.7
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 1.2e-101 374.0 326 68.7
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 1.2e-101 374.0 326 68.7
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 1.2e-101 374.0 326 68.7
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 2.0e-101 373.2 322 69.9
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 2.0e-101 373.2 325 70.2
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.6e-101 372.9 320 69.4
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 2.6e-101 372.9 252 82.1
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 5.7e-101 371.7 261 82.8
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 9.2e-99 364.4 328 67.4
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 2.7e-98 362.8 327 69.1
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 4.6e-98 362.1 299 73.6
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.3e-97 360.5 262 77.1
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 1.7e-97 360.1 273 72.5
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 1.7e-97 360.1 299 71.2
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 3.9e-97 359.0 307 70.0
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 5.0e-97 358.6 306 63.4
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 7.3e-96 354.8 269 75.5
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 7.3e-96 354.8 337 65.3
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 2.8e-95 352.8 231 88.3
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 4.0e-94 349.0 302 70.9
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.4e-91 338.6 227 85.5
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 2.0e-90 336.7 231 81.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.9e-88 330.1 325 57.2
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 2.1e-87 326.6 303 67.7
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 1.2e-85 320.9 262 69.1
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 3.7e-84 315.8 333 63.1
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 1.6e-82 310.5 361 59.3
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 1.1e-80 304.3 256 65.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.4e-78 297.4 250 67.2
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 7.6e-77 291.6 249 59.8
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 7.1e-75 285.0 250 58.4
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 7.8e-74 281.6 196 83.2
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 3.9e-73 279.3 194 84.5
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.6e-72 275.4 257 58.8
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 1.3e-68 264.2 262 67.6
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 2.2e-68 263.5 249 71.5
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 8.1e-63 245.0 241 69.3
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 9.3e-59 231.5 286 45.5
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 4.3e-56 222.6 267 49.4
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 6.2e-55 218.8 149 73.2
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 2.2e-52 210.3 125 81.6
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 1.3e-49 201.1 149 70.5
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.3e-49 201.1 124 79.8
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.6e-42 177.6 156 75.6
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.3e-41 174.5 174 69.0
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 4.5e-37 159.5 128 67.2
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 8.7e-33 145.2 93 77.4
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 2.5e-32 143.7 96 75.0
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 4.3e-32 142.9 110 66.4
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 1.4e-30 137.9 261 37.5
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 4.1e-30 136.3 108 73.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 1.5e-24 117.9 77 75.3
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 1.0e-17 95.1 164 49.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 6.7e-17 92.4 83 80.7
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 6.7e-17 92.4 107 65.4
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 2.2e-15 87.4 122 46.7
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.6e-13 81.3 85 72.9
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 5.0e-12 76.3 93 47.3
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 5.3e-06 56.2 76 34.2


User provided reference genes

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