Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 3.2e-212 741.5 374 100.0
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 5.4e-87 325.5 385 54.0
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 1.9e-76 290.4 332 55.1
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 5.6e-76 288.9 342 54.1
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 9.6e-76 288.1 332 54.8
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 6.3e-51 205.7 331 43.5
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.2e-49 201.4 330 43.3
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 7.7e-49 198.7 329 42.2
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 4.2e-47 193.0 330 41.8
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 1.6e-46 191.0 327 41.9
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 2.1e-46 190.7 330 42.1
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 6.1e-46 189.1 326 41.1
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 7.9e-46 188.7 329 41.0
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.8e-45 187.6 340 40.3
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 3.0e-45 186.8 330 40.9
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 3.3e-44 183.3 331 40.5
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.7e-44 182.6 333 40.8
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 7.4e-44 182.2 334 40.7
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 7.4e-44 182.2 337 39.5
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 9.7e-44 181.8 338 40.8
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 9.7e-44 181.8 341 39.6
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.7e-43 181.0 330 40.0
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 2.2e-43 180.6 327 39.8
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 2.2e-43 180.6 334 40.4
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 4.8e-43 179.5 339 40.4
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 4.8e-43 179.5 320 40.6
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 1.1e-42 178.3 335 40.3
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 1.4e-42 177.9 321 39.6
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.8e-42 177.6 327 41.3
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.8e-42 177.6 334 40.4
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.8e-42 177.6 336 39.9
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 4.1e-42 176.4 332 40.7
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 9.1e-42 175.3 321 40.5
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 1.5e-41 174.5 315 39.7
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 4.5e-41 172.9 320 39.4
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 5.9e-41 172.6 321 39.6
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 5.9e-41 172.6 332 38.6
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 7.7e-41 172.2 321 41.1
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 1.3e-40 171.4 333 38.4
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 1.7e-40 171.0 319 40.4
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 5.0e-40 169.5 311 40.5
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 6.5e-40 169.1 329 38.6
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.1e-39 168.3 323 38.7
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 1.4e-39 167.9 327 38.2
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.4e-39 167.9 331 39.3
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.9e-39 167.5 333 39.6
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 9.4e-39 165.2 260 43.8
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 9.4e-39 165.2 319 39.8
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 1.0e-37 161.8 361 38.2
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 6.7e-37 159.1 334 36.2
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 8.8e-37 158.7 310 38.1
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 1.1e-36 158.3 311 38.3
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.5e-36 157.9 394 34.8
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.0e-36 157.5 328 38.1
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 7.4e-36 155.6 321 38.6
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.7e-35 154.5 333 38.1
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 4.8e-35 152.9 334 36.2
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.1e-34 151.8 325 36.9
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.4e-34 150.6 337 36.2
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 2.4e-34 150.6 329 36.5
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 3.1e-34 150.2 336 37.2
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 3.1e-34 150.2 328 36.0
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.1e-34 149.8 321 37.4
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 4.1e-34 149.8 328 37.5
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 2.0e-33 147.5 327 36.7
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 2.0e-33 147.5 416 33.4
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 2.6e-33 147.1 326 37.7
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 4.5e-33 146.4 328 37.8
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.3e-32 144.8 328 35.4
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.7e-32 144.4 328 36.6
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 2.2e-32 144.1 321 35.8
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 3.8e-32 143.3 328 34.5
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 6.5e-32 142.5 301 36.5
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 8.5e-32 142.1 215 44.2
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 1.1e-31 141.7 329 35.3
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 1.5e-31 141.4 329 36.5
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.9e-31 141.0 316 34.5
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.2e-31 140.2 328 35.7
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 3.2e-31 140.2 316 34.2
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 4.2e-31 139.8 329 35.9
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 1.2e-30 138.3 326 36.2
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.1e-30 136.0 207 42.5
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.0e-29 135.2 329 35.3
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.0e-29 133.3 328 33.2
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 6.8e-29 132.5 316 34.5
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 6.8e-29 132.5 328 34.8
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.6e-28 130.6 290 34.8
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 4.4e-28 129.8 320 35.0
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.1e-26 125.2 328 33.5
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.8e-26 124.4 328 33.5
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.6e-25 121.3 328 35.1
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.7e-25 120.6 328 33.2
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 2.7e-25 120.6 328 33.2
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 3.5e-25 120.2 328 33.2
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 3.5e-25 120.2 327 32.4
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 7.7e-25 119.0 319 32.9
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.7e-24 117.9 292 32.5
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.9e-24 117.1 313 33.5
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 5.5e-23 112.8 331 31.4
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 7.2e-23 112.5 216 36.6
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.2e-22 111.7 334 33.5
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.6e-22 110.2 340 32.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 8.8e-21 105.5 344 28.5
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 2.8e-19 100.5 326 33.1
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 4.5e-17 93.2 308 32.1
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 3.8e-16 90.1 288 30.6
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 4.4e-12 76.6 321 26.8
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 5.7e-12 76.3 315 28.9
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 2.2e-11 74.3 93 49.5
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 3.7e-11 73.6 85 49.4
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 1.9e-07 61.2 155 32.9


User provided reference genes

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