Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 4.3e-107 391.3 198 100.0
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.8e-90 335.5 197 85.3
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 3.1e-89 332.0 197 85.3
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 2.5e-83 312.4 196 80.6
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 9.6e-83 310.5 201 80.1
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 4.8e-82 308.1 199 78.4
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 4.8e-82 308.1 199 78.4
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 6.2e-82 307.8 196 81.6
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 6.2e-82 307.8 195 80.0
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.1e-81 307.0 191 80.6
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 1.1e-81 307.0 191 81.2
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 1.4e-81 306.6 194 79.4
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.8e-81 306.2 194 80.9
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 2.4e-81 305.8 194 80.4
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 3.1e-81 305.4 194 78.9
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 6.9e-81 304.3 192 79.2
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 1.2e-80 303.5 194 78.9
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 1.5e-80 303.1 194 78.9
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 2.0e-80 302.8 191 79.6
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 2.0e-80 302.8 191 80.1
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 2.6e-80 302.4 198 78.3
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 7.6e-80 300.8 194 78.9
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 7.6e-80 300.8 199 76.4
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 9.9e-80 300.4 199 77.9
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 9.9e-80 300.4 191 79.1
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 2.9e-79 298.9 200 75.5
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 2.9e-79 298.9 190 80.0
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 2.9e-79 298.9 196 78.1
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 3.8e-79 298.5 191 77.5
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 6.4e-79 297.7 194 78.4
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 1.1e-78 297.0 192 77.6
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 1.1e-78 297.0 194 76.8
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 2.4e-78 295.8 194 77.3
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 4.2e-78 295.0 201 75.1
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 4.2e-78 295.0 192 78.6
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 7.1e-78 294.3 196 77.0
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 9.3e-78 293.9 195 75.4
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 9.3e-78 293.9 195 75.4
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 9.3e-78 293.9 196 76.5
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 1.2e-77 293.5 190 77.4
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 2.1e-77 292.7 195 75.9
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 3.5e-77 292.0 198 74.7
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 4.6e-77 291.6 194 74.7
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 1.3e-76 290.0 195 75.9
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.7e-76 289.7 194 74.7
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 1.7e-76 289.7 194 76.3
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 2.3e-76 289.3 198 74.7
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 3.9e-76 288.5 194 74.7
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 5.1e-76 288.1 198 72.7
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 5.1e-76 288.1 194 76.8
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 8.7e-76 287.3 187 75.4
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-75 287.0 191 75.4
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-75 287.0 191 75.4
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 1.1e-75 287.0 196 76.0
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 1.1e-75 287.0 186 75.3
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.5e-75 285.8 191 74.9
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 5.6e-75 284.6 197 73.6
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 5.6e-75 284.6 195 74.4
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 9.6e-75 283.9 187 77.0
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.3e-74 283.5 218 69.7
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 2.1e-74 282.7 188 75.0
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.1e-74 282.7 191 74.3
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 1.1e-73 280.4 190 75.3
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 1.4e-73 280.0 186 73.1
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 1.4e-73 280.0 186 73.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.4e-73 280.0 181 79.0
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 1.8e-73 279.6 188 72.9
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 2.4e-73 279.3 188 73.4
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 6.9e-73 277.7 200 70.5
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 6.9e-73 277.7 197 72.6
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 9.0e-73 277.3 185 72.4
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 1.2e-72 276.9 185 72.4
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 1.2e-72 276.9 189 73.5
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 2.0e-72 276.2 194 74.7
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.4e-72 275.4 176 80.7
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 4.5e-72 275.0 190 71.6
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 4.5e-72 275.0 197 70.6
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 7.6e-72 274.2 185 71.4
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 1.3e-71 273.5 249 60.2
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 2.2e-71 272.7 256 59.0
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 3.8e-71 271.9 186 75.3
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 8.4e-71 270.8 185 74.6
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 5.5e-70 268.1 195 71.8
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 7.1e-70 267.7 188 70.7
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 1.2e-69 266.9 186 71.0
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 4.6e-69 265.0 208 66.8
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 6.0e-69 264.6 183 70.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 3.8e-63 245.4 162 75.9
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 5.5e-62 241.5 183 65.6
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.3e-60 236.9 172 68.0
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 1.5e-59 233.4 185 63.8
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 7.4e-59 231.1 183 63.9
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 1.6e-58 229.9 149 76.5
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 8.2e-58 227.6 192 65.1
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.8e-57 226.5 164 71.3
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.2e-55 219.5 191 61.3
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.1e-53 213.0 191 62.8
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 1.3e-50 203.8 143 74.8
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 8.2e-50 201.1 262 46.9
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 1.5e-48 196.8 126 81.0
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 2.9e-47 192.6 137 71.5
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 1.1e-46 190.7 109 86.2
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 1.4e-46 190.3 109 85.3
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 5.5e-46 188.3 141 70.2
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 1.6e-45 186.8 113 81.4
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 2.1e-45 186.4 145 66.2
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 4.3e-43 178.7 113 80.5
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 1.0e-39 167.5 185 49.7
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 6.1e-37 158.3 200 46.0
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 1.0e-36 157.5 86 87.2
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 4.8e-34 148.7 136 55.1
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 8.2e-34 147.9 102 70.6
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 1.8e-33 146.7 121 63.6
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 5.0e-31 138.7 145 54.5
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 6.3e-26 121.7 140 53.6
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 8.5e-23 111.3 188 40.4
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 9.4e-22 107.8 62 83.9
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 2.3e-20 103.2 199 34.2
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.8e-17 93.6 84 54.8
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 9.4e-14 81.3 79 50.6
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 3.4e-11 72.8 109 42.2
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 1.2e-08 64.3 52 59.6
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 2.3e-07 60.1 51 60.8
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.8e-07 59.3 57 50.9


User provided reference genes

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