Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 7.4e-209 730.3 377 100.0
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 2.3e-194 682.2 377 92.6
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 3.7e-192 674.9 391 89.5
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 1.8e-170 602.8 365 83.8
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 1.3e-168 596.7 365 82.7
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 1.8e-167 592.8 357 85.2
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 1.3e-165 586.6 349 86.0
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 6.5e-165 584.3 379 81.0
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 7.2e-164 580.9 358 83.8
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 1.6e-163 579.7 377 79.8
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 3.6e-163 578.6 377 79.6
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.0e-162 577.0 358 83.5
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.0e-162 577.0 381 79.8
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.4e-162 576.6 358 83.5
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 1.8e-162 576.2 368 80.7
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 5.2e-162 574.7 368 80.7
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 6.8e-162 574.3 357 83.8
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 6.8e-162 574.3 381 79.8
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 2.0e-161 572.8 376 78.5
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 2.6e-161 572.4 377 79.8
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 9.8e-161 570.5 374 80.2
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 9.8e-161 570.5 326 87.7
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 3.7e-160 568.5 360 81.9
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 3.7e-160 568.5 358 82.7
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 8.3e-160 567.4 355 83.4
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 1.8e-159 566.2 377 79.6
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 2.4e-159 565.8 365 80.5
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 3.1e-159 565.5 357 80.7
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 5.4e-159 564.7 346 83.5
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 5.4e-159 564.7 388 77.3
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 7.0e-159 564.3 339 84.7
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 3.5e-158 562.0 327 86.9
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 3.5e-158 562.0 351 82.3
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 4.5e-158 561.6 378 78.8
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 1.0e-157 560.5 327 87.8
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.3e-157 560.1 345 83.2
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 2.9e-157 558.9 357 80.4
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.8e-157 558.5 354 80.8
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.8e-157 558.5 354 80.8
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 5.0e-157 558.1 362 80.1
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 6.6e-157 557.8 326 85.9
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 1.5e-156 556.6 362 79.6
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 2.5e-156 555.8 334 84.7
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 2.5e-156 555.8 376 77.7
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 3.3e-156 555.4 358 81.3
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 3.3e-156 555.4 345 82.6
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 3.3e-156 555.4 357 80.4
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 5.6e-156 554.7 360 78.6
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 7.2e-156 554.3 360 78.6
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 7.2e-156 554.3 351 80.9
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 7.2e-156 554.3 360 78.9
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 7.2e-156 554.3 357 80.1
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 9.5e-156 553.9 355 82.3
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 9.5e-156 553.9 356 80.1
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 9.5e-156 553.9 343 83.4
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 1.2e-155 553.5 357 80.7
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 1.2e-155 553.5 378 75.7
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 1.6e-155 553.1 367 77.7
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 2.1e-155 552.7 356 79.8
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 2.8e-155 552.4 358 80.2
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 2.8e-155 552.4 357 81.2
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 3.6e-155 552.0 366 77.0
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 3.6e-155 552.0 366 77.0
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 4.7e-155 551.6 376 77.9
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 6.1e-155 551.2 370 76.5
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 8.0e-155 550.8 370 76.5
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 1.8e-154 549.7 346 82.1
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 1.8e-154 549.7 355 80.0
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 1.8e-154 549.7 338 82.5
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 2.3e-154 549.3 357 79.6
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 3.0e-154 548.9 372 75.8
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 4.0e-154 548.5 360 77.8
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 4.0e-154 548.5 360 78.1
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 4.0e-154 548.5 377 77.2
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 5.2e-154 548.1 366 76.8
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 5.2e-154 548.1 366 76.2
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 1.2e-153 547.0 360 78.6
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 2.0e-153 546.2 362 78.5
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 2.0e-153 546.2 453 67.3
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 2.6e-153 545.8 370 75.9
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 2.6e-153 545.8 352 79.5
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 4.4e-153 545.0 366 76.5
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 7.5e-153 544.3 359 78.8
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 3.7e-152 542.0 355 79.2
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 3.7e-152 542.0 355 79.2
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 4.9e-152 541.6 358 77.9
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 4.9e-152 541.6 374 75.4
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 6.4e-152 541.2 358 77.9
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 6.4e-152 541.2 358 77.9
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 6.4e-152 541.2 353 79.3
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 8.3e-152 540.8 365 77.3
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 8.3e-152 540.8 374 76.2
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 1.1e-151 540.4 363 76.9
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 1.1e-151 540.4 445 67.9
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 1.4e-151 540.0 352 81.5
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 1.8e-151 539.7 366 77.0
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 2.4e-151 539.3 358 77.7
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 2.4e-151 539.3 376 75.3
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.4e-151 539.3 376 75.3
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 5.4e-151 538.1 365 76.7
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 5.4e-151 538.1 326 83.1
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 9.2e-151 537.3 287 95.5
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 9.2e-151 537.3 356 78.9
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 9.2e-151 537.3 354 78.2
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 1.6e-150 536.6 380 74.7
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 3.5e-150 535.4 345 78.8
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 4.6e-150 535.0 328 83.2
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.0e-149 533.9 373 75.6
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 1.7e-149 533.1 326 81.0
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 2.3e-149 532.7 374 73.5
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 5.0e-149 531.6 355 78.3
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.0e-149 531.6 360 77.8
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 2.5e-148 529.3 370 75.9
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.5e-148 529.3 360 77.2
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 7.3e-148 527.7 352 77.6
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.2e-147 526.9 355 77.7
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 1.6e-147 526.6 363 73.6
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 1.6e-147 526.6 355 76.1
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 2.1e-147 526.2 382 74.9
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.1e-147 526.2 388 72.4
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 2.8e-147 525.8 355 75.8
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 1.0e-146 523.9 320 82.8
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.3e-146 522.7 376 74.5
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.3e-146 522.7 376 74.5
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 1.5e-145 520.0 374 73.5
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 5.8e-145 518.1 356 77.0
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 2.4e-143 512.7 438 65.1
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 3.2e-143 512.3 366 74.6
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 4.1e-143 511.9 344 77.0
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 3.5e-142 508.8 287 89.5
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 3.9e-141 505.4 366 72.1
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 6.6e-141 504.6 300 84.0
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 4.3e-140 501.9 326 77.6
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 4.3e-140 501.9 300 82.7
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 3.6e-139 498.8 370 71.4
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 2.6e-137 492.7 359 71.3
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 3.4e-137 492.3 326 76.7
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 1.3e-136 490.3 290 86.2
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 6.0e-134 481.5 326 74.5
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 7.8e-134 481.1 345 72.8
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.3e-133 479.6 352 71.9
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 8.6e-133 477.6 336 73.5
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 1.1e-132 477.2 331 74.6
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.1e-130 470.7 310 79.4
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 2.3e-130 469.5 301 77.7
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 1.4e-127 460.3 322 71.7
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 1.7e-125 453.4 299 76.3
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 3.3e-116 422.5 354 69.2
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 6.2e-115 418.3 334 66.2
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 1.3e-109 400.6 348 61.5
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 9.0e-106 387.9 261 77.8
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 3.2e-103 379.4 266 77.1
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.8e-98 363.6 290 64.5
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 7.1e-95 351.7 254 74.4
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 2.5e-79 300.1 320 56.2
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 1.1e-71 274.6 191 75.4
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 2.5e-71 273.5 186 76.9
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 6.1e-70 268.9 309 50.8
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 2.6e-65 253.4 375 45.6
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 1.6e-49 201.1 112 85.7
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 2.5e-47 193.7 113 86.7
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 3.5e-41 173.3 174 60.3
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 3.5e-41 173.3 174 60.3
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 3.5e-41 173.3 174 60.3
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 3.5e-33 146.7 104 69.2
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 2.3e-32 144.1 345 31.3
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 3.9e-32 143.3 98 72.4
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 3.9e-32 143.3 98 72.4
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 2.5e-31 140.6 98 71.4
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 4.3e-31 139.8 94 72.3
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 1.6e-30 137.9 102 67.6
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 5.2e-29 132.9 107 61.7
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 7.5e-28 129.0 106 61.3
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 7.5e-20 102.4 60 80.0
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 3.2e-18 97.1 67 77.6
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.3e-16 91.7 49 91.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.1e-14 84.3 61 73.8
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 9.6e-07 58.9 38 68.4


User provided reference genes

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