Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000445 Sechium edule HOM05D001377 ORTHO05D001221 8.6e-127 457.2 269 100.0
Sed0021007 Sechium edule HOM05D001377 ORTHO05D001221 3.9e-63 245.7 324 51.9
ClCG01G017910 Citrullus lanatus HOM05D001377 ORTHO05D001221 1.0e-42 177.9 316 45.6
Sed0013236 Sechium edule HOM05D001377 ORTHO05D001221 4.4e-38 162.5 324 44.1
MELO3C007665.2 Cucumis melo HOM05D001377 ORTHO05D001221 1.9e-33 147.1 314 42.4
CsaV3_6G044430 Cucumis sativus L. HOM05D001377 ORTHO05D001221 3.6e-32 142.9 316 41.8
Ca_22089_v3 Cicer arietinum L. HOM05D001377 ORTHO05D001221 3.4e-22 109.8 167 40.1
Manes.13G107600 Manihot esculenta HOM05D001377 ORTHO05D001221 3.4e-22 109.8 182 41.8
Lj4g0025248 Lotus japonicus HOM05D001377 ORTHO05D001221 9.8e-22 108.2 167 40.1
CiPaw.07G038400 Carya illinoinensis HOM05D001377 ORTHO05D001221 2.9e-21 106.7 169 53.8
Medtr4g097580 Medicago truncatula HOM05D001377 ORTHO05D001221 1.1e-20 104.8 167 38.3
TAR381G1251 Trochodendron aralioides HOM05D001377 ORTHO05D001221 4.1e-20 102.8 199 38.2
Actinidia36411 Actinidia chinensis HOM05D001377 ORTHO05D001221 2.0e-19 100.5 236 40.7
TPR.G3699 Trifolium pratense HOM05D001377 ORTHO05D001221 5.9e-19 99.0 167 46.1
Psat4g080640 Pisum sativum HOM05D001377 ORTHO05D001221 1.7e-18 97.4 179 36.3
arahy.Tifrunner.gnm1.ann1.90HUEH Arachis hypogaea HOM05D001377 ORTHO05D001221 3.6e-16 89.7 147 39.5
Lalb_Chr16g0379031 Lupinus albus HOM05D001377 ORTHO05D001221 1.8e-15 87.4 176 36.4
Eucgr.I00661 Eucalyptus grandis HOM05D001377 ORTHO05D001221 2.3e-15 87.0 222 35.1
Haze_03970 Corylus avellana HOM05D001377 ORTHO05D001221 1.7e-13 80.9 174 48.3
CARHR279770 Cardamine hirsuta HOM05D001377 ORTHO05D001221 3.7e-13 79.7 169 40.8
Duzib147G1298 Durio zibethinus HOM05D001377 ORTHO05D001221 3.7e-13 79.7 222 33.8
EL10Ac6g14944 Beta vulgaris HOM05D001377 ORTHO05D001221 4.9e-13 79.3 135 37.8
Gohir.D03G031500 Gossypium hirsutum HOM05D001377 ORTHO05D001221 6.4e-13 79.0 171 40.4
Peaxi162Scf00096g01717 Petunia axillaris HOM05D001377 ORTHO05D001221 8.3e-13 78.6 188 30.3
Sp2g28870 Schrenkiella parvula HOM05D001377 ORTHO05D001221 1.1e-12 78.2 216 37.5
Hund16591 Selenicereus undatus HOM05D001377 ORTHO05D001221 1.1e-12 78.2 144 38.2
Gorai.003G033100 Gossypium raimondii HOM05D001377 ORTHO05D001221 1.4e-12 77.8 171 40.4
CiPaw.08G149100 Carya illinoinensis HOM05D001377 ORTHO05D001221 2.4e-12 77.0 98 44.9
Aa31LG1G16300 Aethionema arabicum HOM05D001377 ORTHO05D001221 3.2e-12 76.6 231 37.7
Thhalv10003578m.g Eutrema salsugineum HOM05D001377 ORTHO05D001221 3.2e-12 76.6 180 41.1
Gohir.A02G148800 Gossypium hirsutum HOM05D001377 ORTHO05D001221 4.1e-12 76.3 171 40.9
MD02G1191400 Malus domestica HOM05D001377 ORTHO05D001221 7.0e-12 75.5 196 30.6
Glyma.01G196400 Glycine max HOM05D001377 ORTHO05D001221 1.2e-11 74.7 205 30.7
Manes.12G118800 Manihot esculenta HOM05D001377 ORTHO05D001221 1.2e-11 74.7 182 38.5
COL.COLO4_11633 Corchorus olitorius HOM05D001034 ORTHO05D000955 4.6e-11 72.8 169 42.0
Ah.03g139510 Amaranthus hybridus HOM05D001034 ORTHO05D000955 7.8e-11 72.0 209 30.1
BcaC01g02835 Brassica carinata HOM05D001377 ORTHO05D001221 7.8e-11 72.0 168 45.2
C03p59890 Brassica napus HOM05D001377 ORTHO05D001221 7.8e-11 72.0 168 45.2
BolC3t18254H Brassica oleracea HOM05D001377 ORTHO05D001221 7.8e-11 72.0 168 45.2
HanXRQChr17g0567751 Helianthus annuus HOM05D001377 ORTHO05D001221 1.3e-10 71.2 176 43.8
AT5G65770 Arabidopsis thaliana HOM05D001377 ORTHO05D001221 3.9e-10 69.7 154 42.9
AT5G65780 Arabidopsis thaliana HOM05D001377 ORTHO05D001221 3.9e-10 69.7 154 42.9
AUR62007977 Chenopodium quinoa HOM05D001377 ORTHO05D001221 3.9e-10 69.7 205 31.2
CSS0028126 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 5.0e-10 69.3 235 34.9
THA.LOC104826508 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 5.0e-10 69.3 169 39.6
AL8G43490 Arabidopsis lyrata HOM05D001377 ORTHO05D001221 6.6e-10 68.9 154 42.9
Lalb_Chr09g0335511 Lupinus albus HOM05D001377 ORTHO05D001221 6.6e-10 68.9 204 39.2
Nitab4.5_0002390g0010 Nicotiana tabacum HOM05D001377 ORTHO05D001221 8.6e-10 68.6 185 29.7
Gorai.007G227800 Gossypium raimondii HOM05D001377 ORTHO05D001221 2.5e-09 67.0 169 39.1
TWI77G0068 Tripterygium wilfordii HOM05D001377 ORTHO05D001221 2.5e-09 67.0 168 43.5
Glyma.17G157900 Glycine max HOM05D001377 ORTHO05D001221 3.3e-09 66.6 168 31.5
QL06p038381 Quercus lobata HOM05D001377 ORTHO05D001221 7.3e-09 65.5 169 44.4
Phvul.003G232200 Phaseolus vulgaris HOM05D001377 ORTHO05D001221 9.5e-09 65.1 208 25.5
PGSC0003DMG400021400 Solanum tuberosum HOM05D001377 ORTHO05D001221 9.5e-09 65.1 173 31.8
THA.LOC104815216 Tarenaya hassleriana HOM05D001377 ORTHO05D001221 9.5e-09 65.1 182 33.0
Carub.0008s2667 Capsella rubella HOM05D001377 ORTHO05D001221 1.2e-08 64.7 146 43.2
Sabra12G0023500 Salix brachista HOM05D001377 ORTHO05D001221 1.2e-08 64.7 181 41.4
BcaB04g20027 Brassica carinata HOM05D001377 ORTHO05D001221 1.6e-08 64.3 225 35.6
Potri.012G034300 Populus trichocarpa HOM05D001377 ORTHO05D001221 6.2e-08 62.4 94 39.4
PGR004G0636 Punica granatum HOM05D001377 ORTHO05D001221 6.2e-08 62.4 173 41.6
CSS0016620 Camellia sinensis var. sinensis HOM05D001377 ORTHO05D001221 8.1e-08 62.0 223 34.1
unitig_0.g494 Utricularia gibba HOM05D001377 ORTHO05D001221 8.1e-08 62.0 147 44.2
GSVIVG01007428001 Vitis vinifera HOM05D001377 ORTHO05D001221 8.1e-08 62.0 90 38.9
Atru.chr3.1079 Acer truncatum HOM05D001377 ORTHO05D001221 1.4e-07 61.2 93 39.8
Ciclev10024751m.g Citrus clementina HOM05D001377 ORTHO05D001221 1.8e-07 60.8 90 40.0
Migut.H00316 Erythranthe guttata HOM05D001377 ORTHO05D001221 5.2e-07 59.3 186 39.8
Duzib264G0128 Durio zibethinus HOM05D001377 ORTHO05D001221 1.2e-06 58.2 169 39.6
Cpa.g.sc129.57 Carica papaya HOM05D001377 ORTHO05D001221 1.5e-06 57.8 89 42.7
AUR62003155 Chenopodium quinoa HOM05D001377 ORTHO05D001221 1.5e-06 57.8 135 41.5
Nn6g34551 Nelumbo nucifera HOM05D001377 ORTHO05D001221 1.5e-06 57.8 91 40.7
Thecc.01G078400 Theobroma cacao HOM05D001377 ORTHO05D001221 3.4e-06 56.6 169 38.5
VMungo0251G3305 Vigna mungo HOM05D001377 ORTHO05D001221 3.4e-06 56.6 98 33.7
CANSAT01G3006 Cannabis sativa HOM05D001377 ORTHO05D001221 7.5e-06 55.5 92 34.8
Glyma.05G109300 Glycine max HOM05D001377 ORTHO05D001221 7.5e-06 55.5 180 28.3


User provided reference genes

Program Settings