Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 9.3e-206 719.9 353 100.0
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 1.2e-136 490.3 333 73.6
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 1.2e-128 463.8 324 71.0
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 3.5e-128 462.2 318 72.0
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 6.0e-128 461.5 315 73.3
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 6.0e-128 461.5 315 73.3
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 6.6e-127 458.0 274 78.1
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 1.1e-126 457.2 317 70.0
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 9.6e-126 454.1 316 71.8
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 2.8e-125 452.6 317 70.7
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 4.7e-125 451.8 318 69.8
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 5.2e-124 448.4 310 71.6
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 8.9e-124 447.6 313 70.6
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 4.4e-123 445.3 320 67.8
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 4.4e-123 445.3 320 67.8
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 1.7e-122 443.4 336 68.8
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 1.7e-122 443.4 320 67.5
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 7.1e-121 438.0 312 69.6
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 1.2e-120 437.2 340 65.0
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 1.2e-120 437.2 311 67.8
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 1.2e-120 437.2 343 64.7
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 1.2e-120 437.2 316 69.3
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 1.6e-120 436.8 317 68.5
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 2.1e-120 436.4 324 67.3
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 2.1e-120 436.4 358 62.0
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 3.5e-120 435.6 324 67.6
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 4.6e-120 435.3 312 69.6
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.0e-119 434.1 312 69.2
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 1.3e-119 433.7 316 69.0
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 1.7e-119 433.3 340 64.7
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 3.0e-119 432.6 311 70.1
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 3.9e-119 432.2 334 63.8
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 3.9e-119 432.2 319 68.7
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 6.6e-119 431.4 316 66.8
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 3.3e-118 429.1 316 67.7
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 5.6e-118 428.3 333 66.4
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 7.3e-118 427.9 342 65.2
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 1.3e-117 427.2 316 67.4
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.1e-117 426.4 350 64.3
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 2.1e-117 426.4 310 67.7
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 8.1e-117 424.5 311 69.5
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 8.1e-117 424.5 315 68.6
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 1.8e-116 423.3 268 74.6
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 2.4e-116 422.9 344 63.4
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 2.4e-116 422.9 339 64.0
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 2.4e-116 422.9 342 64.3
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 5.3e-116 421.8 311 68.8
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 1.5e-115 420.2 311 67.8
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.5e-115 420.2 323 65.9
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 2.0e-115 419.9 275 73.1
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 2.0e-115 419.9 327 64.5
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 2.6e-115 419.5 310 66.8
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 4.5e-115 418.7 302 69.5
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.3e-114 417.2 316 65.8
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 1.3e-114 417.2 311 66.9
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 2.9e-114 416.0 277 73.3
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 2.4e-113 412.9 333 64.3
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 7.1e-113 411.4 322 65.8
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 1.6e-112 410.2 320 64.7
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 1.6e-112 410.2 323 63.5
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 2.1e-112 409.8 330 63.3
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 4.6e-112 408.7 330 64.2
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 6.0e-112 408.3 325 64.0
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.0e-111 407.5 330 63.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.0e-111 407.5 316 66.1
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 1.3e-111 407.1 356 60.1
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 1.8e-111 406.8 330 63.6
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 2.3e-111 406.4 305 65.9
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 3.0e-111 406.0 296 67.2
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 3.9e-111 405.6 321 64.8
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 3.9e-111 405.6 321 64.8
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 3.9e-111 405.6 321 64.8
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 3.9e-111 405.6 323 64.1
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 6.7e-111 404.8 333 62.5
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 1.1e-110 404.1 340 61.5
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 1.5e-110 403.7 293 67.9
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.5e-110 403.7 300 68.3
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 5.6e-110 401.7 304 67.4
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 5.6e-110 401.7 274 69.7
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 3.6e-109 399.1 308 64.6
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 1.4e-108 397.1 319 63.3
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 1.4e-108 397.1 319 63.3
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 1.4e-108 397.1 319 63.3
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 1.4e-108 397.1 310 66.5
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 9.0e-108 394.4 296 68.9
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 4.5e-107 392.1 277 68.6
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 7.6e-107 391.3 320 63.1
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 2.9e-106 389.4 295 66.8
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 3.8e-106 389.0 250 72.4
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 1.4e-105 387.1 297 66.7
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 3.2e-105 386.0 307 61.9
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 1.2e-104 384.0 288 66.7
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 8.7e-103 377.9 312 62.5
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 3.7e-101 372.5 265 66.4
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 2.6e-99 366.3 301 62.8
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.7e-98 363.6 267 62.9
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 3.8e-98 362.5 322 56.5
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 6.5e-98 361.7 315 60.3
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 2.5e-97 359.8 268 61.9
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 5.5e-97 358.6 210 79.0
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 1.2e-96 357.5 212 78.3
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 1.0e-95 354.4 286 59.8
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 1.1e-94 350.9 210 79.5
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 4.8e-93 345.5 288 64.9
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 1.8e-92 343.6 263 68.1
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 4.5e-91 339.0 367 51.5
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 9.3e-89 331.3 291 60.1
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 8.2e-85 318.2 255 57.6
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 1.4e-84 317.4 232 63.4
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 1.8e-84 317.0 271 59.4
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 4.5e-83 312.4 240 61.2
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 2.5e-81 306.6 310 51.9
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 5.5e-81 305.4 240 60.8
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 4.8e-77 292.4 237 57.0
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 1.7e-69 267.3 185 70.3
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 5.9e-67 258.8 211 64.9
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 7.7e-67 258.5 167 72.5
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 1.0e-66 258.1 198 59.6
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 8.5e-66 255.0 211 60.7
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 8.8e-63 245.0 216 54.6
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 1.0e-55 221.5 232 53.0
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 4.1e-52 209.5 297 40.7
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 5.4e-52 209.1 184 54.9
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 2.0e-46 190.7 135 68.1
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 3.4e-46 189.9 175 55.4
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 3.8e-42 176.4 214 46.7
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.5e-41 174.5 214 46.3
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.0e-39 168.3 214 45.8
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 1.2e-38 164.9 119 65.5
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-38 164.9 198 44.4
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 4.9e-37 159.5 101 71.3
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 2.0e-35 154.1 85 82.4
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 2.5e-33 147.1 198 41.9
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.3e-33 146.4 175 44.0
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 5.6e-33 146.0 98 72.4
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 6.2e-32 142.5 97 72.2
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.4e-29 132.5 213 36.6
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-27 128.3 214 37.9
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 1.0e-26 125.2 77 72.7
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.3e-26 124.0 174 39.7
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 2.3e-26 124.0 174 39.7
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 4.3e-25 119.8 84 65.5
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 7.3e-25 119.0 198 35.4
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 3.6e-24 116.7 165 44.2
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 6.2e-24 115.9 138 47.8
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.4e-20 104.0 220 32.3
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 1.8e-15 87.8 180 32.2
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 2.9e-13 80.5 198 29.8
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 1.5e-09 68.2 57 54.4
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 1.6e-08 64.7 68 50.0
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 8.1e-08 62.4 34 79.4
Pp3c4_24930 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.1e-07 62.0 92 37.0
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 6.9e-07 59.3 61 49.2


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