Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4082 Salvia bowleyana HOM05D006077 ORTHO05D007499 3.3e-46 188.0 91 100.0
SalBow6G4389 Salvia bowleyana HOM05D006077 ORTHO05D007499 3.3e-46 188.0 91 100.0
Migut.D00939 Erythranthe guttata HOM05D006077 ORTHO05D007499 2.0e-43 178.7 91 93.4
Solyc12g049310.2 Solanum lycopersicum HOM05D006077 ORTHO05D007499 9.9e-43 176.4 91 92.3
Sopen12g023790 Solanum pennellii HOM05D006077 ORTHO05D007499 9.9e-43 176.4 91 92.3
Peaxi162Scf00177g00511 Petunia axillaris HOM05D006077 ORTHO05D007499 1.7e-42 175.6 91 91.2
SalBow6G7202 Salvia bowleyana HOM05D006077 ORTHO05D007499 1.7e-42 175.6 98 89.8
CAN.G1368.2 Capsicum annuum HOM05D006077 ORTHO05D007499 8.4e-42 173.3 91 91.2
Cc00_g21000 Coffea canephora HOM05D006077 ORTHO05D007499 1.9e-41 172.2 91 89.0
ATR0598G320 Amborella trichopoda HOM05D006077 ORTHO05D007499 2.4e-41 171.8 95 90.5
CDE11G1182 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 2.1e-40 168.7 88 86.4
PSO421G0038 Papaver somniferum HOM05D006077 ORTHO05D007499 2.1e-40 168.7 87 92.0
Lalb_Chr01g0013591 Lupinus albus HOM05D006077 ORTHO05D007499 2.7e-40 168.3 86 93.0
Thecc.06G119600 Theobroma cacao HOM05D006077 ORTHO05D007499 2.7e-40 168.3 95 88.4
VMungo0331G1077 Vigna mungo HOM05D006077 ORTHO05D007499 2.7e-40 168.3 89 88.8
Aqoxy7G01092 Aquilegia oxysepala HOM05D006077 ORTHO05D007499 3.5e-40 167.9 95 87.4
CiPaw.02G136000 Carya illinoinensis HOM05D006077 ORTHO05D007499 3.5e-40 167.9 89 89.9
Psat4g182400 Pisum sativum HOM05D006077 ORTHO05D007499 3.5e-40 167.9 95 87.4
Rhsim08G0238900 Rhododendron simsii HOM05D006077 ORTHO05D007499 3.5e-40 167.9 95 87.4
Actinidia26028 Actinidia chinensis HOM05D006077 ORTHO05D007499 6.0e-40 167.2 89 89.9
CSS0011852 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 6.0e-40 167.2 89 89.9
Dinv37869 Davidia involucrata HOM05D006077 ORTHO05D007499 7.9e-40 166.8 89 89.9
Glyma.07G038100 Glycine max HOM05D006077 ORTHO05D007499 7.9e-40 166.8 91 86.8
TPR.G32491 Trifolium pratense HOM05D006077 ORTHO05D007499 7.9e-40 166.8 95 86.3
Glyma.16G007300 Glycine max HOM05D006077 ORTHO05D007499 1.0e-39 166.4 89 87.6
Hma1.2p1_0291F.1_g115130 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 1.0e-39 166.4 87 89.7
Lj3g0010947 Lotus japonicus HOM05D006077 ORTHO05D007499 1.0e-39 166.4 89 86.5
Phvul.010G130300 Phaseolus vulgaris HOM05D006077 ORTHO05D007499 1.0e-39 166.4 89 87.6
TWI75G1673 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 1.3e-39 166.0 86 93.0
GSVIVG01016766001 Vitis vinifera HOM05D006077 ORTHO05D007499 1.3e-39 166.0 89 88.8
Haze_16030 Corylus avellana HOM05D006077 ORTHO05D007499 1.8e-39 165.6 89 89.9
FvH4_6g34660 Fragaria vesca HOM05D006077 ORTHO05D007499 1.8e-39 165.6 86 90.7
FAN09G3570 Fragaria x ananassa HOM05D006077 ORTHO05D007499 1.8e-39 165.6 86 90.7
FAN14G4463 Fragaria x ananassa HOM05D006077 ORTHO05D007499 1.8e-39 165.6 86 90.7
Gohir.D04G009800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 1.8e-39 165.6 95 87.4
Gorai.012G011600 Gossypium raimondii HOM05D006077 ORTHO05D007499 1.8e-39 165.6 95 87.4
PSO063G4040 Papaver somniferum HOM05D006077 ORTHO05D007499 1.8e-39 165.6 87 90.8
RcHm_v2.0_Chr2g0145211 Rosa chinensis HOM05D006077 ORTHO05D007499 1.8e-39 165.6 86 90.7
TAR636G2213 Trochodendron aralioides HOM05D006077 ORTHO05D007499 1.8e-39 165.6 95 86.3
Prupe.3G042200 Prunus persica HOM05D006077 ORTHO05D007499 3.0e-39 164.9 86 91.9
TWI79G1574 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 3.0e-39 164.9 86 91.9
Eucgr.F03177 Eucalyptus grandis HOM05D006077 ORTHO05D007499 3.9e-39 164.5 86 91.9
Gohir.A05G405800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 3.9e-39 164.5 86 91.9
CANSAT64G0122 Cannabis sativa HOM05D006077 ORTHO05D007499 5.1e-39 164.1 86 90.7
CANSAT64G2602 Cannabis sativa HOM05D006077 ORTHO05D007499 5.1e-39 164.1 86 90.7
ECA232G1087 Erigeron canadensis HOM05D006077 ORTHO05D007499 5.1e-39 164.1 86 90.7
arahy.Tifrunner.gnm1.ann1.G5XP6S Arachis hypogaea HOM05D006077 ORTHO05D007499 6.7e-39 163.7 95 85.3
arahy.Tifrunner.gnm1.ann1.G7AU8E Arachis hypogaea HOM05D006077 ORTHO05D007499 6.7e-39 163.7 95 85.3
Hma1.2p1_0496F.1_g166240 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 1.5e-38 162.5 83 91.6
MD09G1183900 Malus domestica HOM05D006077 ORTHO05D007499 1.5e-38 162.5 86 89.5
Medtr8g020500 Medicago truncatula HOM05D006077 ORTHO05D007499 1.5e-38 162.5 84 91.7
RcHm_v2.0_Chr3g0490611 Rosa chinensis HOM05D006077 ORTHO05D007499 1.9e-38 162.2 87 88.5
Sc15g0000510 Simmondsia chinensis HOM05D006077 ORTHO05D007499 1.9e-38 162.2 95 83.2
Lsat_1_v5_gn_4_92920 Lactuca sativa HOM05D006077 ORTHO05D007499 3.3e-38 161.4 87 88.5
CiPaw.01G218900 Carya illinoinensis HOM05D006077 ORTHO05D007499 4.3e-38 161.0 98 84.7
Hund05739 Selenicereus undatus HOM05D006077 ORTHO05D007499 1.3e-37 159.5 89 83.1
RcHm_v2.0_Chr5g0053491 Rosa chinensis HOM05D006077 ORTHO05D007499 3.7e-37 157.9 85 89.4
AT1G54210 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 4.8e-37 157.5 89 84.3
Carub.0001s4344 Capsella rubella HOM05D006077 ORTHO05D007499 4.8e-37 157.5 89 84.3
Ciclev10026605m.g Citrus clementina HOM05D006077 ORTHO05D007499 8.1e-37 156.8 89 84.3
AL3G26170 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 1.8e-36 155.6 86 86.0
CARHR044580 Cardamine hirsuta HOM05D006077 ORTHO05D007499 1.8e-36 155.6 89 85.4
Os06g0205000 Oryza sativa ssp. japonica HOM05D006077 ORTHO05D007499 2.4e-36 155.2 91 76.9
THA.LOC104822655 Tarenaya hassleriana HOM05D006077 ORTHO05D007499 3.1e-36 154.8 89 84.3
BcaB06g25414 Brassica carinata HOM05D006077 ORTHO05D007499 4.0e-36 154.5 89 82.0
Ah.08g216780 Amaranthus hybridus HOM05D006077 ORTHO05D007499 5.3e-36 154.1 95 77.9
AL1G62920 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 5.3e-36 154.1 86 86.0
BcaB07g33246 Brassica carinata HOM05D006077 ORTHO05D007499 6.9e-36 153.7 89 83.1
Manes.11G020500 Manihot esculenta HOM05D006077 ORTHO05D007499 6.9e-36 153.7 89 80.9
Sp3g12220 Schrenkiella parvula HOM05D006077 ORTHO05D007499 6.9e-36 153.7 89 80.9
Zm00001eb256700 Zea mays HOM05D006077 ORTHO05D007499 6.9e-36 153.7 92 80.4
Thhalv10011896m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 9.0e-36 153.3 89 83.1
Mapoly0025s0134 Marchantia polymorpha HOM05D006077 ORTHO05D007499 2.0e-35 152.1 85 84.7
BcaC05g29136 Brassica carinata HOM05D006077 ORTHO05D007499 2.6e-35 151.8 89 80.9
A05p35440 Brassica napus HOM05D006077 ORTHO05D007499 2.6e-35 151.8 89 80.9
C05p53730 Brassica napus HOM05D006077 ORTHO05D007499 2.6e-35 151.8 89 80.9
BolC5t34043H Brassica oleracea HOM05D006077 ORTHO05D007499 2.6e-35 151.8 89 80.9
AagrBONN_evm.TU.Sc2ySwM_228.485 Anthoceros agrestis HOM05D006077 ORTHO05D007499 4.5e-35 151.0 85 82.4
FAN05G2137 Fragaria x ananassa HOM05D006077 ORTHO05D007499 4.5e-35 151.0 113 69.0
Pp3c4_29920 Physcomitrium patens HOM05D006077 ORTHO05D007499 4.5e-35 151.0 86 81.4
Carub.0003s1355 Capsella rubella HOM05D006077 ORTHO05D007499 5.8e-35 150.6 86 82.6
Sed0008411 Sechium edule HOM05D006077 ORTHO05D007499 9.9e-35 149.8 90 77.8
BcaB07g33245 Brassica carinata HOM05D006077 ORTHO05D007499 1.3e-34 149.4 84 85.7
BcaC08g43600 Brassica carinata HOM05D006077 ORTHO05D007499 1.3e-34 149.4 84 85.7
A06p00460 Brassica napus HOM05D006077 ORTHO05D007499 1.3e-34 149.4 84 85.7
C06p09980 Brassica napus HOM05D006077 ORTHO05D007499 1.3e-34 149.4 84 85.7
BolC6t36071H Brassica oleracea HOM05D006077 ORTHO05D007499 2.9e-34 148.3 84 84.5
BraA06t23260Z Brassica rapa HOM05D006077 ORTHO05D007499 2.9e-34 148.3 84 84.5
BraA05t22354Z Brassica rapa HOM05D006077 ORTHO05D007499 3.8e-34 147.9 84 84.5
Potri.001G169700 Populus trichocarpa HOM05D006077 ORTHO05D007499 3.8e-34 147.9 86 77.9
Aa31LG8G1170 Aethionema arabicum HOM05D006077 ORTHO05D007499 8.4e-34 146.7 84 84.5
ClCG07G014030 Citrullus lanatus HOM05D006077 ORTHO05D007499 8.4e-34 146.7 90 76.7
CsaV3_3G043520 Cucumis sativus L. HOM05D006077 ORTHO05D007499 8.4e-34 146.7 90 76.7
MELO3C025809.2 Cucumis melo HOM05D006077 ORTHO05D007499 1.1e-33 146.4 90 76.7
unitig_699.g19648 Utricularia gibba HOM05D002868 ORTHO05D003477 1.9e-33 145.6 80 86.2
Nn4g24846 Nelumbo nucifera HOM05D006077 ORTHO05D007499 7.1e-33 143.7 77 89.6
Potri.003G064300 Populus trichocarpa HOM05D006077 ORTHO05D007499 7.1e-33 143.7 89 75.3
Sed0025034 Sechium edule HOM05D006077 ORTHO05D007499 1.3e-31 139.4 85 77.6
Oeu015484.1 Olea europaea HOM05D006077 ORTHO05D007499 4.3e-30 134.4 71 91.5
vmacro15032 Vaccinium macrocarpon HOM05D006077 ORTHO05D007499 1.1e-28 129.8 79 86.1
Manes.04G144301 Manihot esculenta HOM05D006077 ORTHO05D007499 1.4e-28 129.4 81 75.3
QL05p007703 Quercus lobata HOM05D006077 ORTHO05D007499 4.0e-28 127.9 64 92.2
CBR_g34185 Chara braunii HOM05D000019 ORTHO05D001702 4.5e-27 124.4 73 79.5
Duzib235G0120 Durio zibethinus HOM05D006077 ORTHO05D007499 4.5e-27 124.4 75 85.3
COL.COLO4_30761 Corchorus olitorius HOM05D006077 ORTHO05D007499 5.8e-27 124.0 75 84.0
SGA_v2.0_scaffold4G02063 Striga asiatica HOM05D006077 ORTHO05D007499 1.0e-26 123.2 83 73.5
Nitab4.5_0000189g0210 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.3e-26 122.9 91 69.2
Nitab4.5_0001199g0100 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.3e-26 122.9 91 69.2
CANSAT25G1718 Cannabis sativa HOM05D006077 ORTHO05D007499 8.4e-26 120.2 66 87.9
Duzib192G0164 Durio zibethinus HOM05D006077 ORTHO05D007499 1.9e-25 119.0 75 81.3
EL10Ac7g16407 Beta vulgaris HOM05D006077 ORTHO05D007499 7.1e-25 117.1 75 76.0
RcHm_v2.0_Chr5g0040601 Rosa chinensis HOM05D006077 ORTHO05D007499 7.1e-25 117.1 71 77.5
FAN02G4125 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.7e-24 115.2 90 66.7
AUR62009882 Chenopodium quinoa HOM05D006077 ORTHO05D007499 1.3e-23 112.8 67 74.6
HPP92_019155 Vanilla planifolia HOM05D006077 ORTHO05D007499 1.8e-23 112.5 66 81.8
CARHR088790 Cardamine hirsuta HOM05D006077 ORTHO05D007499 1.5e-22 109.4 66 78.8
Thhalv10021863m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 1.5e-22 109.4 86 66.3
Sabra03G0038000 Salix brachista HOM05D006077 ORTHO05D007499 7.4e-22 107.1 69 72.5
SMO364G0450 Selaginella moellendorffii HOM05D006077 ORTHO05D007499 2.6e-19 98.6 83 54.2
MCO16G375 Micromonas commoda HOM05D006077 ORTHO05D007499 7.6e-19 97.1 90 57.8
PRCOL_00003774 Prasinoderma coloniale HOM05D006077 ORTHO05D007499 1.0e-18 96.7 90 48.9
PGSC0003DMG400011604 Solanum tuberosum HOM05D006077 ORTHO05D007499 2.5e-17 92.0 45 91.1
Cre12.g557000 Chlamydomonas reinhardtii HOM05D006077 ORTHO05D007499 1.4e-15 86.3 90 48.9
CDE05G1235 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 1.9e-14 82.4 53 73.6
CSS0028385 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 2.5e-14 82.0 54 79.6
DCAR_022696 Daucus carota HOM05D006077 ORTHO05D007499 6.3e-13 77.4 40 87.5
Atru.chr1.3943 Acer truncatum HOM05D006077 ORTHO05D007499 1.5e-11 72.8 42 83.3
AT3G13970 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 3.4e-11 71.6 47 68.1


User provided reference genes

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