Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1386 Salvia bowleyana HOM05D004601 ORTHO05D005806 0.0e+00 1157.9 598 100.0
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 3.2e-166 589.3 625 54.7
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 2.2e-154 550.1 621 52.3
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 4.9e-138 495.7 572 51.2
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 8.3e-114 415.2 612 43.1
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 1.6e-109 401.0 599 42.1
Solyc07g018000.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 1.8e-108 397.5 599 42.1
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 4.0e-108 396.4 613 41.8
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 4.0e-108 396.4 631 40.9
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 5.2e-108 396.0 616 41.2
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 7.6e-107 392.1 615 42.0
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 1.3e-106 391.3 615 41.3
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 2.2e-106 390.6 618 41.6
Nitab4.5_0000056g0060 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.4e-105 386.0 621 40.3
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 9.2e-105 385.2 637 39.1
Peaxi162Scf00231g01115 Petunia axillaris HOM05D004601 ORTHO05D005806 1.6e-104 384.4 614 40.2
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 4.6e-104 382.9 604 41.7
CAN.G285.4 Capsicum annuum HOM05D004601 ORTHO05D005806 2.3e-103 380.6 419 50.4
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 1.9e-102 377.5 620 41.1
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 7.3e-102 375.6 619 39.6
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 9.6e-102 375.2 615 40.5
FvH4_4g07160 Fragaria vesca HOM05D004601 ORTHO05D005806 1.6e-101 374.4 633 40.0
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 8.1e-101 372.1 603 41.0
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 1.8e-100 370.9 634 39.7
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 4.0e-100 369.8 627 40.0
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 8.9e-100 368.6 613 39.2
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 1.2e-99 368.2 620 39.5
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 2.0e-99 367.5 590 40.8
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 2.6e-99 367.1 689 38.2
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 2.6e-99 367.1 614 38.9
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 2.2e-98 364.0 625 40.3
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.9e-98 362.8 633 39.2
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 1.1e-97 361.7 614 40.7
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.4e-97 361.3 697 36.9
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 1.4e-97 361.3 619 39.4
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.7e-96 357.1 600 38.8
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 2.7e-96 357.1 617 38.2
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 6.0e-96 355.9 614 38.1
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 1.3e-95 354.8 619 38.3
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.7e-95 354.4 588 40.3
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 1.7e-95 354.4 614 38.8
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.7e-95 354.4 623 38.8
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 3.9e-95 353.2 616 37.5
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 8.7e-95 352.1 641 36.8
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 1.5e-94 351.3 631 37.2
Psat1g144400 Pisum sativum HOM05D004601 ORTHO05D005806 1.9e-94 350.9 606 39.1
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 8.1e-93 345.5 616 40.1
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 8.1e-93 345.5 618 38.7
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 1.4e-92 344.7 614 38.3
FAN22G2150 Fragaria x ananassa HOM05D004601 ORTHO05D005806 4.0e-92 343.2 432 45.1
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 4.0e-92 343.2 611 40.1
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 6.9e-92 342.4 610 38.2
Eucgr.C00108 Eucalyptus grandis HOM05D004601 ORTHO05D005806 5.8e-91 339.3 616 38.1
arahy.Tifrunner.gnm1.ann1.LL4FRQ Arachis hypogaea HOM05D004601 ORTHO05D005806 9.9e-91 338.6 584 39.9
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 9.9e-91 338.6 606 38.0
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 1.7e-90 337.8 379 48.5
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 2.9e-90 337.0 632 37.0
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 4.9e-90 336.3 311 53.7
MELO3C003972.2 Cucumis melo HOM05D004601 ORTHO05D005806 6.4e-90 335.9 616 37.5
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 1.4e-89 334.7 630 36.2
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 2.4e-89 334.0 610 37.7
Carub.0008s1767 Capsella rubella HOM05D004601 ORTHO05D005806 3.2e-89 333.6 644 36.0
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 4.2e-89 333.2 610 37.9
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 6.0e-88 329.3 606 36.8
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.0e-87 328.6 644 38.2
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 6.7e-87 325.9 623 38.4
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 6.7e-87 325.9 628 36.1
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 8.7e-87 325.5 629 36.2
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 1.9e-86 324.3 629 36.1
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 4.3e-86 323.2 627 36.5
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 6.2e-85 319.3 629 35.9
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 7.6e-83 312.4 630 35.1
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 9.9e-83 312.0 618 38.3
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 6.4e-82 309.3 611 37.2
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 1.9e-81 307.8 621 34.0
Glyma.09G060132 Glycine max HOM05D004601 ORTHO05D005806 6.0e-80 302.8 296 52.0
Hma1.2p1_0235F.1_g098690 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.3e-79 301.6 401 44.6
BcaC04g19998 Brassica carinata HOM05D004601 ORTHO05D005806 1.1e-78 298.5 633 35.2
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 1.6e-77 294.7 247 56.3
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 2.1e-77 294.3 617 33.7
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 2.8e-77 293.9 636 32.5
Aqoxy295s002 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 1.5e-75 288.1 305 48.9
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 1.1e-73 282.0 610 35.9
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 1.9e-73 281.2 537 37.1
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 1.2e-72 278.5 601 35.4
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 4.6e-72 276.6 267 50.2
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 3.2e-65 253.8 258 53.1
ClCG11G011720 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.7e-64 250.8 635 32.8
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 1.0e-63 248.8 633 31.4
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 8.8e-55 219.2 401 36.9
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.0e-54 218.0 478 33.9
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 7.7e-51 206.1 167 61.7
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 6.5e-50 203.0 156 62.8
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 6.7e-47 193.0 614 29.5
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 5.7e-46 189.9 460 32.6
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 5.7e-46 189.9 263 41.1
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 9.1e-44 182.6 253 42.3
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 1.6e-43 181.8 238 43.3
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 4.5e-43 180.3 633 28.0
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 1.3e-42 178.7 568 29.0
SEGI_28566 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 6.3e-37 159.8 162 49.4
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 8.2e-37 159.5 214 41.1
Psat5g051520 Pisum sativum HOM05D004601 ORTHO05D005806 3.1e-36 157.5 127 61.4
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 5.0e-34 150.2 406 29.6
SalBow7G2616 Salvia bowleyana HOM05D005568 ORTHO05D006940 1.8e-28 131.7 64 100.0
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 9.1e-28 129.4 458 30.3
Rhsim01G0115200 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.2e-24 119.0 280 33.2
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 2.3e-23 114.8 245 29.8
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 2.2e-21 108.2 67 70.1
RhsimUnG0137600 Rhododendron simsii HOM05D004601 ORTHO05D005806 3.1e-20 104.4 169 40.8
Nitab4.5_0006199g0020 Nicotiana tabacum HOM05D004601 ORTHO05D005806 2.1e-16 91.7 373 28.2
CBR_g50206 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-09 68.6 318 23.3
Lj7A622G13 Lonicera japonica HOM05D004601 ORTHO05D005806 4.3e-09 67.4 157 35.7
SEGI_03765 Sequoiadendron giganteum HOM05D004601 ORTHO05D387201 8.9e-07 59.7 83 37.3


User provided reference genes

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