Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.6e-233 812.4 416 100.0
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 3.1e-232 808.1 416 99.5
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 3.8e-105 386.0 432 55.1
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 7.4e-93 345.1 431 51.0
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 1.3e-76 291.2 504 40.7
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.1e-75 288.1 430 43.5
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 1.1e-75 288.1 433 43.4
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 1.8e-75 287.3 429 43.6
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 1.8e-75 287.3 369 45.8
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 4.6e-71 272.7 426 42.3
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 3.3e-69 266.5 394 43.1
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 1.7e-68 264.2 417 42.7
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 2.2e-68 263.8 389 42.4
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 4.8e-68 262.7 386 42.7
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 1.1e-67 261.5 351 43.6
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 9.1e-67 258.5 387 44.7
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 1.2e-66 258.1 415 41.4
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 3.4e-66 256.5 386 43.3
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 4.5e-66 256.1 392 41.8
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 1.0e-65 255.0 424 40.3
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 1.0e-65 255.0 298 50.0
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 1.7e-65 254.2 400 41.2
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 5.0e-65 252.7 426 42.7
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 6.5e-65 252.3 416 40.9
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 1.4e-64 251.1 419 42.7
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 9.4e-64 248.4 413 40.7
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 3.6e-63 246.5 331 45.6
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 4.7e-63 246.1 350 43.4
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 6.1e-63 245.7 324 44.4
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 7.9e-63 245.4 331 46.5
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 1.4e-62 244.6 405 40.5
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 1.4e-62 244.6 390 42.6
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 2.3e-62 243.8 341 45.2
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 2.3e-62 243.8 437 39.8
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 1.5e-61 241.1 425 40.5
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 5.7e-61 239.2 258 49.2
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 1.7e-60 237.7 388 39.2
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 3.7e-60 236.5 396 37.1
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 6.3e-60 235.7 311 47.6
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 3.1e-59 233.4 463 37.8
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 7.0e-59 232.3 420 38.8
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 4.5e-58 229.6 493 34.1
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 5.9e-58 229.2 335 42.7
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 7.7e-58 228.8 427 37.7
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 7.7e-58 228.8 308 44.5
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 2.9e-57 226.9 438 38.1
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 8.5e-57 225.3 320 44.7
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 1.9e-56 224.2 422 37.9
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 5.5e-56 222.6 351 39.0
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 9.4e-56 221.9 383 38.4
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 9.4e-56 221.9 297 45.5
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 8.0e-55 218.8 483 34.2
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 1.8e-54 217.6 416 37.5
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.8e-54 217.6 504 35.7
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 2.3e-54 217.2 380 38.2
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 3.0e-54 216.9 309 41.7
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 1.5e-53 214.5 320 40.9
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 2.0e-53 214.2 368 40.5
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 2.6e-53 213.8 333 42.9
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 2.6e-53 213.8 276 44.9
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 5.7e-53 212.6 316 43.0
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 7.5e-53 212.2 422 35.8
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 9.7e-53 211.8 325 42.5
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 1.3e-52 211.5 465 34.8
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.7e-52 211.1 420 35.7
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 6.3e-52 209.1 340 41.2
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 8.2e-52 208.8 401 35.4
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 1.8e-51 207.6 251 49.0
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 4.1e-51 206.5 461 34.9
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 5.3e-51 206.1 475 34.3
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 2.0e-50 204.1 442 34.4
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 5.9e-50 202.6 464 33.0
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 1.3e-49 201.4 424 34.7
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 2.9e-49 200.3 321 39.3
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 7.2e-48 195.7 305 43.0
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 9.4e-48 195.3 490 32.2
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 2.7e-47 193.7 524 32.3
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 3.6e-47 193.4 491 33.4
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 4.7e-47 193.0 464 33.2
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 1.0e-46 191.8 509 32.2
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 2.3e-46 190.7 496 33.7
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 4.0e-46 189.9 250 43.2
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 6.8e-46 189.1 206 47.6
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 8.8e-46 188.7 491 33.6
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 7.5e-45 185.7 221 46.2
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 9.8e-45 185.3 531 31.3
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 1.3e-44 184.9 258 42.2
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 1.3e-44 184.9 258 42.2
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 1.7e-44 184.5 220 46.4
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 6.3e-44 182.6 538 31.2
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 1.1e-43 181.8 219 45.2
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 1.1e-43 181.8 309 40.5
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 1.1e-43 181.8 309 40.5
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 1.8e-43 181.0 442 33.3
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 1.5e-40 171.4 263 40.7
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 2.5e-40 170.6 427 33.3
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 4.2e-40 169.9 329 35.0
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 5.2e-38 162.9 153 48.4
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 4.4e-37 159.8 295 36.6
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 7.5e-37 159.1 257 40.1
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 9.8e-37 158.7 259 39.0
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 7.0e-35 152.5 285 38.2
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 1.8e-30 137.9 187 43.3
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 4.0e-30 136.7 175 40.6
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 4.9e-28 129.8 320 29.7
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 1.2e-26 125.2 212 36.3
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 1.2e-26 125.2 173 42.2
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 2.7e-26 124.0 239 33.9
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 4.6e-26 123.2 189 37.0
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 3.0e-25 120.6 116 56.9
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 5.0e-17 93.2 63 65.1
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.9e-16 91.3 144 41.7
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.1e-14 85.5 110 45.5
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.7e-12 78.2 53 64.2


User provided reference genes

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