Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 8.8e-47 189.9 92 100.0
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 5.0e-42 174.1 92 92.4
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.1e-40 168.7 83 96.4
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.0e-39 164.9 83 95.2
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.0e-39 164.9 83 95.2
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 9.1e-28 126.7 83 69.9
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 6.5e-26 120.6 84 70.2
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 4.2e-25 117.9 83 67.5
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.2e-24 116.3 56 96.4
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.8e-23 112.5 79 65.8
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 4.0e-23 111.3 83 66.3
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 4.0e-23 111.3 79 63.3
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 6.8e-23 110.5 83 63.9
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 1.2e-22 109.8 79 67.1
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 1.5e-22 109.4 83 65.1
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.5e-22 109.4 83 65.1
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 2.0e-22 109.0 72 69.4
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.6e-22 108.6 82 61.0
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 2.6e-22 108.6 82 61.0
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 5.7e-22 107.5 79 63.3
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 9.8e-22 106.7 83 59.0
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 1.3e-21 106.3 83 65.1
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 1.3e-21 106.3 83 59.0
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 2.2e-21 105.5 80 63.8
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 2.2e-21 105.5 81 61.7
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 2.8e-21 105.1 78 65.4
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 3.7e-21 104.8 82 56.1
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 3.7e-21 104.8 80 65.0
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 4.8e-21 104.4 79 63.3
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 4.8e-21 104.4 83 59.0
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 6.3e-21 104.0 82 64.6
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 6.3e-21 104.0 82 62.2
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 8.3e-21 103.6 81 61.7
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 1.4e-20 102.8 84 60.7
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.8e-20 102.4 81 58.0
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 4.1e-20 101.3 85 58.8
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 5.4e-20 100.9 83 56.6
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 5.4e-20 100.9 81 60.5
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 7.0e-20 100.5 82 53.7
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 7.0e-20 100.5 81 59.3
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 7.0e-20 100.5 85 60.0
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 9.1e-20 100.1 81 59.3
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 1.2e-19 99.8 85 57.6
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 1.2e-19 99.8 77 62.3
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 1.2e-19 99.8 83 57.8
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 1.6e-19 99.4 81 58.0
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 1.6e-19 99.4 79 59.5
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 1.6e-19 99.4 87 60.9
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.7e-19 98.6 84 59.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.7e-19 98.6 77 58.4
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 2.7e-19 98.6 74 62.2
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 2.7e-19 98.6 74 62.2
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 4.5e-19 97.8 85 57.6
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 4.5e-19 97.8 84 57.1
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 4.5e-19 97.8 78 57.7
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 7.7e-19 97.1 81 56.8
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 7.7e-19 97.1 84 58.3
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 1.7e-18 95.9 78 61.5
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.7e-18 95.9 78 57.7
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 2.9e-18 95.1 84 54.8
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 3.8e-18 94.7 74 64.9
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 3.8e-18 94.7 81 58.0
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 5.0e-18 94.4 79 55.7
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 6.5e-18 94.0 77 62.3
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 6.5e-18 94.0 87 56.3
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 8.5e-18 93.6 74 64.9
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 8.5e-18 93.6 74 64.9
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 8.5e-18 93.6 83 53.0
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 1.1e-17 93.2 79 55.7
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-17 93.2 79 55.7
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.1e-17 93.2 79 55.7
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 1.5e-17 92.8 74 63.5
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 1.5e-17 92.8 79 57.0
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 1.5e-17 92.8 79 55.7
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 1.9e-17 92.4 81 58.0
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 2.5e-17 92.0 84 54.8
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 2.5e-17 92.0 79 54.4
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 3.2e-17 91.7 83 56.6
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 3.2e-17 91.7 81 55.6
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 3.2e-17 91.7 74 63.5
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 3.2e-17 91.7 78 59.0
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 5.5e-17 90.9 74 63.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 5.5e-17 90.9 83 56.6
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 1.6e-16 89.4 74 62.2
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 1.6e-16 89.4 74 62.2
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.6e-16 89.4 80 56.2
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 2.1e-16 89.0 82 50.0
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 2.1e-16 89.0 75 56.0
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 2.1e-16 89.0 92 52.2
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 2.1e-16 89.0 83 55.4
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 2.8e-16 88.6 74 62.2
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 2.8e-16 88.6 76 60.5
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 4.7e-16 87.8 74 59.5
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 1.0e-15 86.7 74 60.8
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.0e-15 86.7 87 55.2
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 3.0e-15 85.1 83 51.8
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 5.2e-15 84.3 68 60.3
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 5.2e-15 84.3 83 54.2
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 1.5e-14 82.8 77 61.0
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 7.5e-14 80.5 81 53.1
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 3.7e-13 78.2 76 48.7
SalBow1G8168 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.7e-11 72.0 35 91.4
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 2.9e-10 68.6 73 50.7
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 2.9e-10 68.6 78 46.2
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 9.5e-09 63.5 51 54.9
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 3.6e-08 61.6 83 41.0
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 2.6e-06 55.5 51 56.9


User provided reference genes

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