Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0120100 Salix brachista HOM05D005064 ORTHO05D050424 3.4e-130 468.4 248 100.0
Potri.014G189600 Populus trichocarpa HOM05D005064 ORTHO05D006611 4.3e-32 142.5 106 68.9
Sabra14G0144800 Salix brachista HOM05D005064 ORTHO05D006611 3.0e-25 119.8 106 63.2
Potri.016G125901 Populus trichocarpa HOM05D005064 ORTHO05D050424 2.5e-24 116.7 78 79.5
Manes.09G111200 Manihot esculenta HOM05D005064 ORTHO05D006611 1.1e-16 91.3 102 52.0
Sabra06G0080700 Salix brachista HOM05D005064 ORTHO05D006611 1.5e-16 90.9 106 53.8
Haze_21075 Corylus avellana HOM05D005064 ORTHO05D006611 2.0e-16 90.5 91 56.0
QL07p034075 Quercus lobata HOM05D005064 ORTHO05D006611 7.4e-16 88.6 92 54.3
CiPaw.09G214600 Carya illinoinensis HOM05D005064 ORTHO05D006611 2.2e-15 87.0 91 54.9
Gorai.012G119100 Gossypium raimondii HOM05D005064 ORTHO05D006611 2.2e-15 87.0 107 48.6
Gohir.A04G095400 Gossypium hirsutum HOM05D005064 ORTHO05D006611 4.8e-15 85.9 107 48.6
Gohir.D04G135300 Gossypium hirsutum HOM05D005064 ORTHO05D006611 1.1e-14 84.7 107 47.7
Thecc.05G007600 Theobroma cacao HOM05D005064 ORTHO05D006611 3.1e-14 83.2 111 45.9
Atru.chr8.2328 Acer truncatum HOM05D005064 ORTHO05D006611 5.3e-14 82.4 102 49.0
vmacro04273 Vaccinium macrocarpon HOM05D005064 ORTHO05D006611 6.9e-14 82.0 112 39.3
ClCG10G022430 Citrullus lanatus HOM05D005064 ORTHO05D006611 9.1e-14 81.6 120 43.3
Sed0013669 Sechium edule HOM05D005064 ORTHO05D006611 2.6e-13 80.1 90 51.1
Rhsim05G0225400 Rhododendron simsii HOM05D005064 ORTHO05D006611 3.4e-13 79.7 58 62.1
CANSAT35G0044 Cannabis sativa HOM05D005064 ORTHO05D006611 4.5e-13 79.3 59 62.7
GSVIVG01030280001 Vitis vinifera HOM05D005064 ORTHO05D006611 4.5e-13 79.3 86 53.5
Duzib093G0745 Durio zibethinus HOM05D005064 ORTHO05D006611 5.9e-13 79.0 105 47.6
Dinv35394 Davidia involucrata HOM05D005064 ORTHO05D006611 7.7e-13 78.6 101 45.5
MELO3C009135.2 Cucumis melo HOM05D005064 ORTHO05D006611 1.0e-12 78.2 98 45.9
Prupe.4G287200 Prunus persica HOM05D005064 ORTHO05D006611 1.3e-12 77.8 104 44.2
Lj2C68T2 Lonicera japonica HOM05D005064 ORTHO05D006611 1.7e-12 77.4 93 50.5
TWI74G0298 Tripterygium wilfordii HOM05D005064 ORTHO05D006611 2.9e-12 76.6 58 62.1
CsaV3_3G033440 Cucumis sativus L. HOM05D005064 ORTHO05D006611 1.1e-11 74.7 114 40.4
Eucgr.K02953 Eucalyptus grandis HOM05D005064 ORTHO05D006611 1.4e-11 74.3 58 62.1
FAN28G2142 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.4e-11 74.3 58 63.8
CiPaw.09G214500 Carya illinoinensis HOM05D005064 ORTHO05D006611 1.9e-11 73.9 58 63.8
Cc06_g00810 Coffea canephora HOM05D005064 ORTHO05D006611 2.5e-11 73.6 57 64.9
COL.COLO4_14461 Corchorus olitorius HOM05D005064 ORTHO05D006611 3.2e-11 73.2 59 54.2
Hund25531 Selenicereus undatus HOM05D005064 ORTHO05D006611 4.2e-11 72.8 79 53.2
Ciclev10013403m.g Citrus clementina HOM05D005064 ORTHO05D006611 7.2e-11 72.0 58 58.6
FAN23G3111 Fragaria x ananassa HOM05D005064 ORTHO05D006611 9.4e-11 71.6 58 62.1
FAN26G2490 Fragaria x ananassa HOM05D005064 ORTHO05D006611 9.4e-11 71.6 58 62.1
Cpa.g.sc5.230 Carica papaya HOM05D005064 ORTHO05D006611 1.2e-10 71.2 94 48.9
FvH4_1g25820 Fragaria vesca HOM05D005064 ORTHO05D006611 1.2e-10 71.2 58 62.1
FAN19G0240 Fragaria x ananassa HOM05D005064 ORTHO05D006611 1.2e-10 71.2 58 62.1
Peaxi162Scf00744g00354 Petunia axillaris HOM05D005064 ORTHO05D006611 1.2e-10 71.2 44 72.7
Lalb_Chr22g0360891 Lupinus albus HOM05D005064 ORTHO05D006611 2.1e-10 70.5 56 57.1
Nitab4.5_0010437g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 2.7e-10 70.1 44 70.5
Nitab4.5_0021252g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 2.7e-10 70.1 44 70.5
CSS0042379 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 3.6e-10 69.7 58 58.6
RcHm_v2.0_Chr3g0484931 Rosa chinensis HOM05D005064 ORTHO05D006611 3.6e-10 69.7 58 60.3
Sc07g0001460 Simmondsia chinensis HOM05D005064 ORTHO05D006611 6.1e-10 68.9 93 44.1
ECA234G3016 Erigeron canadensis HOM05D005064 ORTHO05D006611 1.0e-09 68.2 77 49.4
Lsat_1_v5_gn_5_149520 Lactuca sativa HOM05D005064 ORTHO05D006611 1.0e-09 68.2 60 51.7
Nitab4.5_0006212g0010 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.0e-09 68.2 54 59.3
HanXRQChr15g0486851 Helianthus annuus HOM05D005064 ORTHO05D006611 1.4e-09 67.8 59 52.5
Nitab4.5_0001246g0050 Nicotiana tabacum HOM05D005064 ORTHO05D006611 1.4e-09 67.8 52 59.6
Oeu026978.1 Olea europaea HOM05D005064 ORTHO05D006611 1.4e-09 67.8 81 46.9
Lj6g0012785 Lotus japonicus HOM05D005064 ORTHO05D006611 1.8e-09 67.4 56 55.4
EL10Ac5g12491 Beta vulgaris HOM05D005064 ORTHO05D006611 3.0e-09 66.6 59 50.8
CSS0001431 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 3.0e-09 66.6 58 56.9
MSTRG.18977 Avicennia marina HOM05D005064 ORTHO05D006611 3.9e-09 66.2 46 65.2
Glyma.13G010700 Glycine max HOM05D005064 ORTHO05D006611 5.1e-09 65.9 56 53.6
Psat5g101280 Pisum sativum HOM05D005064 ORTHO05D006611 6.7e-09 65.5 56 55.4
arahy.Tifrunner.gnm1.ann1.168PWC Arachis hypogaea HOM05D005064 ORTHO05D006611 8.8e-09 65.1 105 38.1
MD01G1008700 Malus domestica HOM05D005064 ORTHO05D006611 8.8e-09 65.1 46 60.9
arahy.Tifrunner.gnm1.ann1.XPQW08 Arachis hypogaea HOM05D005064 ORTHO05D006611 1.1e-08 64.7 58 56.9
SalBow5G0042 Salvia bowleyana HOM05D005064 ORTHO05D006611 1.1e-08 64.7 50 60.0
SalBow5G1296 Salvia bowleyana HOM05D005064 ORTHO05D006611 1.1e-08 64.7 50 60.0
TPR.G18982 Trifolium pratense HOM05D005064 ORTHO05D006611 1.1e-08 64.7 56 55.4
TAR633G1737 Trochodendron aralioides HOM05D005064 ORTHO05D006611 1.1e-08 64.7 52 61.5
CSS0019886 Camellia sinensis var. sinensis HOM05D005064 ORTHO05D006611 1.5e-08 64.3 81 42.0
CAN.G989.4 Capsicum annuum HOM05D005064 ORTHO05D006611 2.0e-08 63.9 58 51.7
TPR.G19329 Trifolium pratense HOM05D005064 ORTHO05D006611 2.0e-08 63.9 56 55.4
Aqoxy2G00779 Aquilegia oxysepala HOM05D005064 ORTHO05D006611 2.6e-08 63.5 52 51.9
Os01g0164800 Oryza sativa ssp. japonica HOM05D005064 ORTHO05D006611 2.6e-08 63.5 68 50.0
Phvul.L001612 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 2.6e-08 63.5 56 53.6
Sopen02g008440 Solanum pennellii HOM05D005064 ORTHO05D006611 2.6e-08 63.5 58 51.7
Nn2g11003 Nelumbo nucifera HOM05D005064 ORTHO05D006611 4.4e-08 62.8 58 50.0
Phvul.006G005800 Phaseolus vulgaris HOM05D005064 ORTHO05D006611 4.4e-08 62.8 44 63.6
HPP92_013858 Vanilla planifolia HOM05D005064 ORTHO05D006611 4.4e-08 62.8 52 61.5
MBI03_g13049_MAGBIO Magnolia biondii HOM05D005064 ORTHO05D006611 5.7e-08 62.4 57 49.1
Medtr3g083250 Medicago truncatula HOM05D005064 ORTHO05D006611 5.7e-08 62.4 56 53.6
PSO339G1571 Papaver somniferum HOM05D005064 ORTHO05D006611 5.7e-08 62.4 52 57.7
PSO801G0135 Papaver somniferum HOM05D005064 ORTHO05D006611 5.7e-08 62.4 52 57.7
Solyc02g050210.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 5.7e-08 62.4 58 51.7
HPP92_013842 Vanilla planifolia HOM05D005064 ORTHO05D006611 5.7e-08 62.4 52 61.5
Ca_16367_v3 Cicer arietinum L. HOM05D005064 ORTHO05D006611 7.4e-08 62.0 56 51.8
BcaB01g06109 Brassica carinata HOM05D005064 ORTHO05D006611 9.7e-08 61.6 64 46.9
C03p00330 Brassica napus HOM05D005064 ORTHO05D006611 9.7e-08 61.6 64 46.9
BolC3t12595H Brassica oleracea HOM05D005064 ORTHO05D006611 9.7e-08 61.6 64 46.9
Solyc02g050200.2 Solanum lycopersicum HOM05D005064 ORTHO05D006611 1.3e-07 61.2 44 61.4
THA.LOC104816179 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 1.3e-07 61.2 71 50.7
Aa31LG1G23250 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.7e-07 60.8 60 50.0
A03p00180 Brassica napus HOM05D005064 ORTHO05D006611 1.7e-07 60.8 64 46.9
BraA03t09408Z Brassica rapa HOM05D005064 ORTHO05D006611 1.7e-07 60.8 64 46.9
ATR0594G137 Amborella trichopoda HOM05D005064 ORTHO05D006611 2.2e-07 60.5 53 52.8
AUR62030526 Chenopodium quinoa HOM05D005064 ORTHO05D006611 2.2e-07 60.5 59 45.8
VMungo0540G1710 Vigna mungo HOM05D005064 ORTHO05D006611 2.2e-07 60.5 56 51.8
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 2.8e-07 60.1 60 50.0
AL6G10420 Arabidopsis lyrata HOM05D005064 ORTHO05D006611 2.8e-07 60.1 45 62.2
AT4G00020 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.8e-07 60.1 45 62.2
AT5G01630 Arabidopsis thaliana HOM05D005064 ORTHO05D006611 2.8e-07 60.1 45 62.2
CARHR211980 Cardamine hirsuta HOM05D005064 ORTHO05D006611 2.8e-07 60.1 47 63.8
Sp6g40890 Schrenkiella parvula HOM05D005064 ORTHO05D006611 2.8e-07 60.1 64 45.3
SHI12869 Sapria himalayana HOM05D005064 ORTHO05D006611 3.7e-07 59.7 59 50.8
SGA_v2.0_scaffold85G26687 Striga asiatica HOM05D005064 ORTHO05D006611 3.7e-07 59.7 50 56.0
BcaB01g06242 Brassica carinata HOM05D005064 ORTHO05D006611 4.8e-07 59.3 52 50.0
Sp7g05130 Schrenkiella parvula HOM05D005064 ORTHO05D006611 8.2e-07 58.5 59 52.5
Oeu027330.4 Olea europaea HOM05D005064 ORTHO05D006611 1.1e-06 58.2 53 50.9
Thhalv10012491m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 1.4e-06 57.8 45 62.2
A05p16640 Brassica napus HOM05D005064 ORTHO05D006611 1.8e-06 57.4 45 62.2
BraA05t20569Z Brassica rapa HOM05D005064 ORTHO05D006611 1.8e-06 57.4 45 62.2
AUR62030766 Chenopodium quinoa HOM05D005064 ORTHO05D006611 2.4e-06 57.0 59 44.1
Thhalv10027627m.g Eutrema salsugineum HOM05D005064 ORTHO05D006611 3.1e-06 56.6 43 65.1
BcaB04g17743 Brassica carinata HOM05D005064 ORTHO05D006611 4.1e-06 56.2 49 57.1
Carub.0006s0020 Capsella rubella HOM05D005064 ORTHO05D006611 4.1e-06 56.2 58 43.1
Migut.J00101 Erythranthe guttata HOM05D005064 ORTHO05D006611 4.1e-06 56.2 44 61.4
unitig_21.g20911 Utricularia gibba HOM05D005064 ORTHO05D006611 4.1e-06 56.2 54 46.3
BcaC08g44292 Brassica carinata HOM05D005064 ORTHO05D006611 5.3e-06 55.8 41 63.4
THA.LOC104798645 Tarenaya hassleriana HOM05D005064 ORTHO05D006611 7.0e-06 55.5 54 55.6


User provided reference genes

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